BLASTX nr result
ID: Zingiber23_contig00049952
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00049952
(242 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004962606.1| PREDICTED: DNA polymerase theta-like isoform... 118 9e-25
ref|XP_006663960.1| PREDICTED: uncharacterized protein LOC102699... 117 2e-24
gb|EOY29653.1| Helicases,ATP-dependent helicases,nucleic acid bi... 117 2e-24
ref|XP_003575560.1| PREDICTED: uncharacterized protein LOC100823... 114 1e-23
gb|EEE53068.1| hypothetical protein OsJ_35810 [Oryza sativa Japo... 114 1e-23
gb|EEC69123.1| hypothetical protein OsI_38041 [Oryza sativa Indi... 114 1e-23
gb|ABA97168.2| DNA polymerase I family protein, expressed [Oryza... 114 1e-23
ref|XP_002516582.1| DNA polymerase theta, putative [Ricinus comm... 113 3e-23
ref|XP_002442101.1| hypothetical protein SORBIDRAFT_08g011950 [S... 112 4e-23
gb|EMJ27875.1| hypothetical protein PRUPE_ppa020963mg [Prunus pe... 111 1e-22
ref|XP_004292864.1| PREDICTED: DNA polymerase theta-like [Fragar... 110 1e-22
ref|XP_002281624.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymera... 110 1e-22
emb|CBI20904.3| unnamed protein product [Vitis vinifera] 110 1e-22
ref|XP_002324822.2| hypothetical protein POPTR_0018s00860g [Popu... 110 2e-22
ref|XP_006476151.1| PREDICTED: DNA polymerase theta-like isoform... 109 3e-22
ref|XP_006450613.1| hypothetical protein CICLE_v100072282mg, par... 109 3e-22
gb|ESW12991.1| hypothetical protein PHAVU_008G158500g [Phaseolus... 108 7e-22
gb|EMT16049.1| Helicase POLQ-like protein [Aegilops tauschii] 108 7e-22
ref|XP_006837922.1| hypothetical protein AMTR_s00218p00024050 [A... 107 1e-21
gb|EXC32791.1| DNA polymerase theta [Morus notabilis] 107 2e-21
>ref|XP_004962606.1| PREDICTED: DNA polymerase theta-like isoform X1 [Setaria italica]
gi|514752594|ref|XP_004962607.1| PREDICTED: DNA
polymerase theta-like isoform X2 [Setaria italica]
gi|514752598|ref|XP_004962608.1| PREDICTED: DNA
polymerase theta-like isoform X3 [Setaria italica]
gi|514752600|ref|XP_004962609.1| PREDICTED: DNA
polymerase theta-like isoform X4 [Setaria italica]
Length = 2082
Score = 118 bits (295), Expect = 9e-25
Identities = 57/80 (71%), Positives = 70/80 (87%)
Frame = -2
Query: 241 QGLFAKFQNRVSFGVRAEIAELTAIPYIKGSRARALYKAGLRTPLAIAEASVTDIVIALS 62
+GL AKFQNRVSFGVRAEIAELT+IP++KGSRARALYK+GLRTP+AIAEAS+ +I AL
Sbjct: 1175 EGLVAKFQNRVSFGVRAEIAELTSIPFVKGSRARALYKSGLRTPVAIAEASIPEIAKALF 1234
Query: 61 DSSRWASQDESNLQRRQLGL 2
+SS W+ QD+S L+R Q G+
Sbjct: 1235 ESSNWSGQDDSGLRRMQFGI 1254
>ref|XP_006663960.1| PREDICTED: uncharacterized protein LOC102699269 [Oryza brachyantha]
Length = 2062
Score = 117 bits (293), Expect = 2e-24
Identities = 57/80 (71%), Positives = 70/80 (87%)
Frame = -2
Query: 241 QGLFAKFQNRVSFGVRAEIAELTAIPYIKGSRARALYKAGLRTPLAIAEASVTDIVIALS 62
+GL AKFQNRV FGVRAEIAELT+IP++KGSRARALYK+GLRTP+AIAEAS+ +I AL
Sbjct: 1201 EGLVAKFQNRVCFGVRAEIAELTSIPFVKGSRARALYKSGLRTPVAIAEASIPEIAKALF 1260
Query: 61 DSSRWASQDESNLQRRQLGL 2
+SS W+ QD+S L+R QLG+
Sbjct: 1261 ESSTWSGQDDSGLRRMQLGI 1280
>gb|EOY29653.1| Helicases,ATP-dependent helicases,nucleic acid binding,ATP
binding,DNA-directed DNA polymerases,DNA binding
[Theobroma cacao]
Length = 2146
Score = 117 bits (292), Expect = 2e-24
Identities = 64/84 (76%), Positives = 71/84 (84%), Gaps = 4/84 (4%)
Frame = -2
Query: 241 QGLFAKFQNRVSFGVRAEIAELTAIPYIKGSRARALYKAGLRTPLAIAEASVTDIVIALS 62
+GL AKFQNRVSFGVRAEI ELT IPY+KGSRARALYKAGLRTPLAIAEAS+ DI AL
Sbjct: 1206 EGLVAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASIPDIFKALF 1265
Query: 61 DSSRWASQD---ESNLQRR-QLGL 2
+SS WA+QD ES+ QRR QLG+
Sbjct: 1266 ESSSWAAQDLSLESSAQRRMQLGV 1289
>ref|XP_003575560.1| PREDICTED: uncharacterized protein LOC100823290 [Brachypodium
distachyon]
Length = 2057
Score = 114 bits (286), Expect = 1e-23
Identities = 57/80 (71%), Positives = 68/80 (85%)
Frame = -2
Query: 241 QGLFAKFQNRVSFGVRAEIAELTAIPYIKGSRARALYKAGLRTPLAIAEASVTDIVIALS 62
+GL AKFQNRVSFGVRAEIAELT+IP++KGSRARALY +GLRTP+ IAEASV I AL
Sbjct: 1187 EGLVAKFQNRVSFGVRAEIAELTSIPFVKGSRARALYNSGLRTPVNIAEASVLQIAKALF 1246
Query: 61 DSSRWASQDESNLQRRQLGL 2
+SS W+ QD+S L+R QLG+
Sbjct: 1247 ESSTWSGQDDSGLRRMQLGI 1266
>gb|EEE53068.1| hypothetical protein OsJ_35810 [Oryza sativa Japonica Group]
Length = 2044
Score = 114 bits (286), Expect = 1e-23
Identities = 56/80 (70%), Positives = 69/80 (86%)
Frame = -2
Query: 241 QGLFAKFQNRVSFGVRAEIAELTAIPYIKGSRARALYKAGLRTPLAIAEASVTDIVIALS 62
+GL AKFQNRV FGVRAEIAELT+IP++KGSRARALYK+GLRTP+AIAEAS+ +I AL
Sbjct: 1175 EGLVAKFQNRVCFGVRAEIAELTSIPFVKGSRARALYKSGLRTPVAIAEASIPEIAKALF 1234
Query: 61 DSSRWASQDESNLQRRQLGL 2
+SS W+ Q +S L+R QLG+
Sbjct: 1235 ESSTWSGQGDSGLRRMQLGI 1254
>gb|EEC69123.1| hypothetical protein OsI_38041 [Oryza sativa Indica Group]
Length = 1986
Score = 114 bits (286), Expect = 1e-23
Identities = 56/80 (70%), Positives = 69/80 (86%)
Frame = -2
Query: 241 QGLFAKFQNRVSFGVRAEIAELTAIPYIKGSRARALYKAGLRTPLAIAEASVTDIVIALS 62
+GL AKFQNRV FGVRAEIAELT+IP++KGSRARALYK+GLRTP+AIAEAS+ +I AL
Sbjct: 1155 EGLVAKFQNRVCFGVRAEIAELTSIPFVKGSRARALYKSGLRTPVAIAEASIPEIAKALF 1214
Query: 61 DSSRWASQDESNLQRRQLGL 2
+SS W+ Q +S L+R QLG+
Sbjct: 1215 ESSTWSGQGDSGLRRMQLGI 1234
>gb|ABA97168.2| DNA polymerase I family protein, expressed [Oryza sativa Japonica
Group]
Length = 2065
Score = 114 bits (286), Expect = 1e-23
Identities = 56/80 (70%), Positives = 69/80 (86%)
Frame = -2
Query: 241 QGLFAKFQNRVSFGVRAEIAELTAIPYIKGSRARALYKAGLRTPLAIAEASVTDIVIALS 62
+GL AKFQNRV FGVRAEIAELT+IP++KGSRARALYK+GLRTP+AIAEAS+ +I AL
Sbjct: 1196 EGLVAKFQNRVCFGVRAEIAELTSIPFVKGSRARALYKSGLRTPVAIAEASIPEIAKALF 1255
Query: 61 DSSRWASQDESNLQRRQLGL 2
+SS W+ Q +S L+R QLG+
Sbjct: 1256 ESSTWSGQGDSGLRRMQLGI 1275
>ref|XP_002516582.1| DNA polymerase theta, putative [Ricinus communis]
gi|223544402|gb|EEF45923.1| DNA polymerase theta,
putative [Ricinus communis]
Length = 2154
Score = 113 bits (282), Expect = 3e-23
Identities = 57/80 (71%), Positives = 69/80 (86%)
Frame = -2
Query: 241 QGLFAKFQNRVSFGVRAEIAELTAIPYIKGSRARALYKAGLRTPLAIAEASVTDIVIALS 62
+GL +KFQ+RVSFGVRAEI ELT IPY+KGSRARALYKAGLRTPLAIAEASV++IV A+
Sbjct: 1191 EGLVSKFQSRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASVSEIVKAIF 1250
Query: 61 DSSRWASQDESNLQRRQLGL 2
+SS W +Q+ S +R QLG+
Sbjct: 1251 ESSSWTAQEGSAQRRLQLGV 1270
>ref|XP_002442101.1| hypothetical protein SORBIDRAFT_08g011950 [Sorghum bicolor]
gi|241942794|gb|EES15939.1| hypothetical protein
SORBIDRAFT_08g011950 [Sorghum bicolor]
Length = 917
Score = 112 bits (281), Expect = 4e-23
Identities = 57/80 (71%), Positives = 69/80 (86%)
Frame = -2
Query: 241 QGLFAKFQNRVSFGVRAEIAELTAIPYIKGSRARALYKAGLRTPLAIAEASVTDIVIALS 62
+GL +KFQNRVSFGVRAEIAELT+IP++KGSRARALYK+GLRTP+AIAEAS+ +I AL
Sbjct: 15 EGLVSKFQNRVSFGVRAEIAELTSIPFVKGSRARALYKSGLRTPVAIAEASIPEIAKALF 74
Query: 61 DSSRWASQDESNLQRRQLGL 2
+SS W+ QD S LQR Q G+
Sbjct: 75 ESSAWSGQD-SGLQRMQFGI 93
>gb|EMJ27875.1| hypothetical protein PRUPE_ppa020963mg [Prunus persica]
Length = 2169
Score = 111 bits (277), Expect = 1e-22
Identities = 57/80 (71%), Positives = 65/80 (81%)
Frame = -2
Query: 241 QGLFAKFQNRVSFGVRAEIAELTAIPYIKGSRARALYKAGLRTPLAIAEASVTDIVIALS 62
+GL KFQNRVSFGVRAEI ELT IPY+KGSRAR+LYKAGLRTPLAIAEASV +IV AL
Sbjct: 1194 EGLVCKFQNRVSFGVRAEIVELTTIPYVKGSRARSLYKAGLRTPLAIAEASVAEIVKALF 1253
Query: 61 DSSRWASQDESNLQRRQLGL 2
+SS W Q+ S +R LG+
Sbjct: 1254 ESSSWTEQEGSAQRRIHLGV 1273
>ref|XP_004292864.1| PREDICTED: DNA polymerase theta-like [Fragaria vesca subsp. vesca]
Length = 2164
Score = 110 bits (276), Expect = 1e-22
Identities = 56/80 (70%), Positives = 67/80 (83%)
Frame = -2
Query: 241 QGLFAKFQNRVSFGVRAEIAELTAIPYIKGSRARALYKAGLRTPLAIAEASVTDIVIALS 62
+GL KFQNRVSFGVRAEI ELT IP++KGSRARALYKAGLRTPLAIAEAS+ +IV AL
Sbjct: 1198 EGLVGKFQNRVSFGVRAEIVELTTIPFVKGSRARALYKAGLRTPLAIAEASIPEIVKALF 1257
Query: 61 DSSRWASQDESNLQRRQLGL 2
+SS WA+Q+ S +R +G+
Sbjct: 1258 ESSSWAAQEGSAQRRIHVGV 1277
>ref|XP_002281624.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase theta-like [Vitis
vinifera]
Length = 2181
Score = 110 bits (276), Expect = 1e-22
Identities = 57/80 (71%), Positives = 66/80 (82%)
Frame = -2
Query: 241 QGLFAKFQNRVSFGVRAEIAELTAIPYIKGSRARALYKAGLRTPLAIAEASVTDIVIALS 62
+GL AKFQNRVSFGVRAEI ELT IPY+KGSRARALYKAGLRTPLAIAEAS+ +IV AL
Sbjct: 1211 EGLVAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASIPEIVKALF 1270
Query: 61 DSSRWASQDESNLQRRQLGL 2
+ S WA++ S + QLG+
Sbjct: 1271 EFSSWAAEGNSVQRNVQLGV 1290
>emb|CBI20904.3| unnamed protein product [Vitis vinifera]
Length = 2091
Score = 110 bits (276), Expect = 1e-22
Identities = 57/80 (71%), Positives = 66/80 (82%)
Frame = -2
Query: 241 QGLFAKFQNRVSFGVRAEIAELTAIPYIKGSRARALYKAGLRTPLAIAEASVTDIVIALS 62
+GL AKFQNRVSFGVRAEI ELT IPY+KGSRARALYKAGLRTPLAIAEAS+ +IV AL
Sbjct: 1143 EGLVAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASIPEIVKALF 1202
Query: 61 DSSRWASQDESNLQRRQLGL 2
+ S WA++ S + QLG+
Sbjct: 1203 EFSSWAAEGNSVQRNVQLGV 1222
>ref|XP_002324822.2| hypothetical protein POPTR_0018s00860g [Populus trichocarpa]
gi|550317750|gb|EEF03387.2| hypothetical protein
POPTR_0018s00860g [Populus trichocarpa]
Length = 2173
Score = 110 bits (275), Expect = 2e-22
Identities = 57/80 (71%), Positives = 67/80 (83%)
Frame = -2
Query: 241 QGLFAKFQNRVSFGVRAEIAELTAIPYIKGSRARALYKAGLRTPLAIAEASVTDIVIALS 62
+GL AKFQNRVSFGVRAEI ELT IPY+KGSRARALYKAGLRTP AIAEAS+ +I AL
Sbjct: 1187 EGLVAKFQNRVSFGVRAEIVELTNIPYVKGSRARALYKAGLRTPQAIAEASIPEIGKALF 1246
Query: 61 DSSRWASQDESNLQRRQLGL 2
+SS W++Q+ S +R QLG+
Sbjct: 1247 ESSSWSAQEGSAQRRVQLGI 1266
>ref|XP_006476151.1| PREDICTED: DNA polymerase theta-like isoform X1 [Citrus sinensis]
gi|568844552|ref|XP_006476152.1| PREDICTED: DNA
polymerase theta-like isoform X2 [Citrus sinensis]
Length = 2191
Score = 109 bits (273), Expect = 3e-22
Identities = 54/74 (72%), Positives = 64/74 (86%)
Frame = -2
Query: 241 QGLFAKFQNRVSFGVRAEIAELTAIPYIKGSRARALYKAGLRTPLAIAEASVTDIVIALS 62
+GL AKFQNRVSFGVRAEI ELT IPY+KGSRARALYKAGLRTPLAIAEAS+++IV AL
Sbjct: 1212 EGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALF 1271
Query: 61 DSSRWASQDESNLQ 20
+SS W ++ + +Q
Sbjct: 1272 ESSSWIAEAQRRVQ 1285
>ref|XP_006450613.1| hypothetical protein CICLE_v100072282mg, partial [Citrus clementina]
gi|557553839|gb|ESR63853.1| hypothetical protein
CICLE_v100072282mg, partial [Citrus clementina]
Length = 1810
Score = 109 bits (273), Expect = 3e-22
Identities = 54/74 (72%), Positives = 64/74 (86%)
Frame = -2
Query: 241 QGLFAKFQNRVSFGVRAEIAELTAIPYIKGSRARALYKAGLRTPLAIAEASVTDIVIALS 62
+GL AKFQNRVSFGVRAEI ELT IPY+KGSRARALYKAGLRTPLAIAEAS+++IV AL
Sbjct: 1212 EGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALF 1271
Query: 61 DSSRWASQDESNLQ 20
+SS W ++ + +Q
Sbjct: 1272 ESSSWIAEAQRRVQ 1285
>gb|ESW12991.1| hypothetical protein PHAVU_008G158500g [Phaseolus vulgaris]
Length = 2126
Score = 108 bits (270), Expect = 7e-22
Identities = 57/80 (71%), Positives = 66/80 (82%)
Frame = -2
Query: 241 QGLFAKFQNRVSFGVRAEIAELTAIPYIKGSRARALYKAGLRTPLAIAEASVTDIVIALS 62
+GL AKFQNRVSFGVRAEI ELT IPY+KGSRAR+LYKAGLRTPLAIAEAS+ +IV AL
Sbjct: 1159 EGLVAKFQNRVSFGVRAEIVELTTIPYVKGSRARSLYKAGLRTPLAIAEASIPEIVKALF 1218
Query: 61 DSSRWASQDESNLQRRQLGL 2
+SS WA++ S + Q GL
Sbjct: 1219 ESSSWATEG-SGQRNLQFGL 1237
>gb|EMT16049.1| Helicase POLQ-like protein [Aegilops tauschii]
Length = 2000
Score = 108 bits (270), Expect = 7e-22
Identities = 54/80 (67%), Positives = 67/80 (83%)
Frame = -2
Query: 241 QGLFAKFQNRVSFGVRAEIAELTAIPYIKGSRARALYKAGLRTPLAIAEASVTDIVIALS 62
+GL AKFQNRVSFGVRAEIAELT IP++KGSRARALY +GLRTP+ IAEAS+ +I AL
Sbjct: 1091 EGLVAKFQNRVSFGVRAEIAELTTIPFVKGSRARALYNSGLRTPVTIAEASIPEIAKALF 1150
Query: 61 DSSRWASQDESNLQRRQLGL 2
++S W+ QD+S L+R Q G+
Sbjct: 1151 ENS-WSGQDDSGLRRMQFGI 1169
>ref|XP_006837922.1| hypothetical protein AMTR_s00218p00024050 [Amborella trichopoda]
gi|548840333|gb|ERN00491.1| hypothetical protein
AMTR_s00218p00024050 [Amborella trichopoda]
Length = 1036
Score = 107 bits (268), Expect = 1e-21
Identities = 52/80 (65%), Positives = 66/80 (82%)
Frame = -2
Query: 241 QGLFAKFQNRVSFGVRAEIAELTAIPYIKGSRARALYKAGLRTPLAIAEASVTDIVIALS 62
+GL +KFQNRV+FGVRAEI ELT IP +KGSRARALY+AGLRTP A+AEAS+ DIV AL
Sbjct: 47 EGLISKFQNRVTFGVRAEIVELTTIPLVKGSRARALYRAGLRTPQAVAEASIPDIVKALF 106
Query: 61 DSSRWASQDESNLQRRQLGL 2
+ S WA+++ S ++R Q G+
Sbjct: 107 EGSSWAAEEGSAMRRMQFGV 126
>gb|EXC32791.1| DNA polymerase theta [Morus notabilis]
Length = 1941
Score = 107 bits (266), Expect = 2e-21
Identities = 55/79 (69%), Positives = 66/79 (83%)
Frame = -2
Query: 241 QGLFAKFQNRVSFGVRAEIAELTAIPYIKGSRARALYKAGLRTPLAIAEASVTDIVIALS 62
+GL AKFQNRVSFGVR+EI ELT IPY+KGSRARALYKAGLRTPL+IAEAS+ +IV AL
Sbjct: 915 EGLVAKFQNRVSFGVRSEIVELTTIPYVKGSRARALYKAGLRTPLSIAEASIPEIVKALF 974
Query: 61 DSSRWASQDESNLQRRQLG 5
++S WA Q + +R Q+G
Sbjct: 975 ETSSWAGQGSAQ-RRIQVG 992