BLASTX nr result
ID: Zingiber23_contig00049871
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00049871
(283 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278416.2| PREDICTED: transcription elongation factor S... 103 3e-20
ref|XP_004249330.1| PREDICTED: transcription elongation factor S... 98 1e-18
gb|ESW34019.1| hypothetical protein PHAVU_001G117200g [Phaseolus... 97 2e-18
ref|XP_003521098.1| PREDICTED: transcription elongation factor S... 97 2e-18
ref|XP_006604310.1| PREDICTED: transcription elongation factor S... 96 4e-18
ref|XP_006604309.1| PREDICTED: transcription elongation factor S... 96 4e-18
ref|XP_006339249.1| PREDICTED: transcription elongation factor S... 96 5e-18
ref|XP_006339248.1| PREDICTED: transcription elongation factor S... 96 5e-18
ref|XP_004493316.1| PREDICTED: transcription elongation factor S... 96 6e-18
ref|XP_004493315.1| PREDICTED: transcription elongation factor S... 96 6e-18
ref|XP_004493314.1| PREDICTED: transcription elongation factor S... 96 6e-18
ref|XP_002267338.2| PREDICTED: transcription elongation factor S... 95 1e-17
emb|CBI40599.3| unnamed protein product [Vitis vinifera] 95 1e-17
emb|CBI40596.3| unnamed protein product [Vitis vinifera] 95 1e-17
ref|XP_006654589.1| PREDICTED: transcription elongation factor S... 94 2e-17
ref|XP_003561333.1| PREDICTED: transcription elongation factor S... 94 2e-17
gb|EMS61141.1| Transcription elongation factor SPT6 [Triticum ur... 92 5e-17
gb|EMT25860.1| Transcription elongation factor SPT6 [Aegilops ta... 91 1e-16
gb|EXC30727.1| Transcription elongation factor SPT6 [Morus notab... 90 3e-16
ref|XP_004961640.1| PREDICTED: transcription elongation factor S... 90 3e-16
>ref|XP_002278416.2| PREDICTED: transcription elongation factor SPT6-like [Vitis vinifera]
Length = 1660
Score = 103 bits (256), Expect = 3e-20
Identities = 56/95 (58%), Positives = 69/95 (72%), Gaps = 1/95 (1%)
Frame = +1
Query: 1 GVASFSNLNMDLLDDTRIHPESYELANNLAKDVYRDDALKEAN-DMDDMLEKVIEHVKKN 177
G+A+ S+ +DLLDDTRIHPESY LA LAKDVYR D +AN D DD LE IEHV+
Sbjct: 998 GLAAASSQIIDLLDDTRIHPESYGLAQELAKDVYRADVEDDANDDDDDALEMAIEHVRDR 1057
Query: 178 PHKLEVFDIDEYANNIFDQYGKNKRETLYDIKMEL 282
P++L+ D+D+YA D+ +NKRETLY IKMEL
Sbjct: 1058 PNRLKALDVDQYAK---DKKLENKRETLYAIKMEL 1089
>ref|XP_004249330.1| PREDICTED: transcription elongation factor SPT6-like [Solanum
lycopersicum]
Length = 1642
Score = 97.8 bits (242), Expect = 1e-18
Identities = 55/96 (57%), Positives = 65/96 (67%), Gaps = 2/96 (2%)
Frame = +1
Query: 1 GVASFSNLNMDLLDDTRIHPESYELANNLAKDVYRDDALKEANDMDDMLEKVIEHVKKNP 180
G + SN +DLLDDTRIHPESY LA LAKD+Y D +EAND D++LE IEHVK+ P
Sbjct: 1016 GYTANSNTYIDLLDDTRIHPESYTLAQELAKDIYLKDMGEEANDDDEVLEMAIEHVKEKP 1075
Query: 181 HKLEVFDIDEYAN--NIFDQYGKNKRETLYDIKMEL 282
H L + + EYAN N FD KRETL IK+EL
Sbjct: 1076 HLLRLVNAYEYANEHNRFD-----KRETLNGIKLEL 1106
>gb|ESW34019.1| hypothetical protein PHAVU_001G117200g [Phaseolus vulgaris]
Length = 1679
Score = 97.4 bits (241), Expect = 2e-18
Identities = 51/94 (54%), Positives = 65/94 (69%)
Frame = +1
Query: 1 GVASFSNLNMDLLDDTRIHPESYELANNLAKDVYRDDALKEANDMDDMLEKVIEHVKKNP 180
G+A+ S+ +DLLDDTRIHPESY LA LAKDVY +D +AND DD LE IEHV+ P
Sbjct: 1001 GLAASSSQFIDLLDDTRIHPESYILAQELAKDVYEEDGTGDANDDDDALEMAIEHVRDRP 1060
Query: 181 HKLEVFDIDEYANNIFDQYGKNKRETLYDIKMEL 282
L+ D++EYA+ + +NK +T YDIK EL
Sbjct: 1061 SYLKNLDVEEYASG---KKRQNKIQTFYDIKREL 1091
>ref|XP_003521098.1| PREDICTED: transcription elongation factor SPT6-like [Glycine max]
Length = 1663
Score = 97.4 bits (241), Expect = 2e-18
Identities = 51/94 (54%), Positives = 65/94 (69%)
Frame = +1
Query: 1 GVASFSNLNMDLLDDTRIHPESYELANNLAKDVYRDDALKEANDMDDMLEKVIEHVKKNP 180
G+A+ S+ +DLLDDTRIHPESY LA LAKDVY +D +AND DD LE IEHV+ P
Sbjct: 1005 GLAASSSQFIDLLDDTRIHPESYILAQELAKDVYEEDGTGDANDDDDALEMAIEHVRDRP 1064
Query: 181 HKLEVFDIDEYANNIFDQYGKNKRETLYDIKMEL 282
L+ D++EYA+ + +NK +T YDIK EL
Sbjct: 1065 SYLKNLDVEEYASG---KKRQNKIQTFYDIKREL 1095
>ref|XP_006604310.1| PREDICTED: transcription elongation factor SPT6-like isoform X2
[Glycine max]
Length = 1524
Score = 96.3 bits (238), Expect = 4e-18
Identities = 50/94 (53%), Positives = 65/94 (69%)
Frame = +1
Query: 1 GVASFSNLNMDLLDDTRIHPESYELANNLAKDVYRDDALKEANDMDDMLEKVIEHVKKNP 180
G+A+ S+ +DLLDDTRIHPESY LA LAKDVY +D +AND DD LE IEHV+ P
Sbjct: 1006 GLAASSSQFIDLLDDTRIHPESYILAQELAKDVYEEDGTGDANDDDDALEMAIEHVRDRP 1065
Query: 181 HKLEVFDIDEYANNIFDQYGKNKRETLYDIKMEL 282
L+ D+++YA+ + +NK +T YDIK EL
Sbjct: 1066 SYLKNLDVEQYASG---KKRQNKIQTFYDIKREL 1096
>ref|XP_006604309.1| PREDICTED: transcription elongation factor SPT6-like isoform X1
[Glycine max]
Length = 1649
Score = 96.3 bits (238), Expect = 4e-18
Identities = 50/94 (53%), Positives = 65/94 (69%)
Frame = +1
Query: 1 GVASFSNLNMDLLDDTRIHPESYELANNLAKDVYRDDALKEANDMDDMLEKVIEHVKKNP 180
G+A+ S+ +DLLDDTRIHPESY LA LAKDVY +D +AND DD LE IEHV+ P
Sbjct: 1006 GLAASSSQFIDLLDDTRIHPESYILAQELAKDVYEEDGTGDANDDDDALEMAIEHVRDRP 1065
Query: 181 HKLEVFDIDEYANNIFDQYGKNKRETLYDIKMEL 282
L+ D+++YA+ + +NK +T YDIK EL
Sbjct: 1066 SYLKNLDVEQYASG---KKRQNKIQTFYDIKREL 1096
>ref|XP_006339249.1| PREDICTED: transcription elongation factor SPT6-like isoform X2
[Solanum tuberosum]
Length = 1642
Score = 95.9 bits (237), Expect = 5e-18
Identities = 52/94 (55%), Positives = 63/94 (67%)
Frame = +1
Query: 1 GVASFSNLNMDLLDDTRIHPESYELANNLAKDVYRDDALKEANDMDDMLEKVIEHVKKNP 180
G + SN +DLLDDTRIHPESY LA LAKD+Y D +E ND D++LE IEHVK+ P
Sbjct: 1019 GYTANSNTYIDLLDDTRIHPESYSLAQELAKDIYLKDMGEENNDDDEVLEMAIEHVKEKP 1078
Query: 181 HKLEVFDIDEYANNIFDQYGKNKRETLYDIKMEL 282
H L + + EYA D+ NKRETL IK+EL
Sbjct: 1079 HLLRLVNAYEYAE---DKNRFNKRETLNGIKLEL 1109
>ref|XP_006339248.1| PREDICTED: transcription elongation factor SPT6-like isoform X1
[Solanum tuberosum]
Length = 1643
Score = 95.9 bits (237), Expect = 5e-18
Identities = 52/94 (55%), Positives = 63/94 (67%)
Frame = +1
Query: 1 GVASFSNLNMDLLDDTRIHPESYELANNLAKDVYRDDALKEANDMDDMLEKVIEHVKKNP 180
G + SN +DLLDDTRIHPESY LA LAKD+Y D +E ND D++LE IEHVK+ P
Sbjct: 1020 GYTANSNTYIDLLDDTRIHPESYSLAQELAKDIYLKDMGEENNDDDEVLEMAIEHVKEKP 1079
Query: 181 HKLEVFDIDEYANNIFDQYGKNKRETLYDIKMEL 282
H L + + EYA D+ NKRETL IK+EL
Sbjct: 1080 HLLRLVNAYEYAE---DKNRFNKRETLNGIKLEL 1110
>ref|XP_004493316.1| PREDICTED: transcription elongation factor SPT6-like isoform X3
[Cicer arietinum]
Length = 1451
Score = 95.5 bits (236), Expect = 6e-18
Identities = 51/94 (54%), Positives = 64/94 (68%)
Frame = +1
Query: 1 GVASFSNLNMDLLDDTRIHPESYELANNLAKDVYRDDALKEANDMDDMLEKVIEHVKKNP 180
G+A+ S+ +DLLDDTRIHPESY LA LAKDVY +D +AND DD LE IEHV+ P
Sbjct: 817 GLAASSSQFIDLLDDTRIHPESYILAQELAKDVYEEDGTGDANDDDDALEMAIEHVRDRP 876
Query: 181 HKLEVFDIDEYANNIFDQYGKNKRETLYDIKMEL 282
L+ D++EYA + ++K ET YDIK EL
Sbjct: 877 SYLKNLDVEEYAAG---KERQDKIETFYDIKREL 907
>ref|XP_004493315.1| PREDICTED: transcription elongation factor SPT6-like isoform X2
[Cicer arietinum]
Length = 1641
Score = 95.5 bits (236), Expect = 6e-18
Identities = 51/94 (54%), Positives = 64/94 (68%)
Frame = +1
Query: 1 GVASFSNLNMDLLDDTRIHPESYELANNLAKDVYRDDALKEANDMDDMLEKVIEHVKKNP 180
G+A+ S+ +DLLDDTRIHPESY LA LAKDVY +D +AND DD LE IEHV+ P
Sbjct: 1007 GLAASSSQFIDLLDDTRIHPESYILAQELAKDVYEEDGTGDANDDDDALEMAIEHVRDRP 1066
Query: 181 HKLEVFDIDEYANNIFDQYGKNKRETLYDIKMEL 282
L+ D++EYA + ++K ET YDIK EL
Sbjct: 1067 SYLKNLDVEEYAAG---KERQDKIETFYDIKREL 1097
>ref|XP_004493314.1| PREDICTED: transcription elongation factor SPT6-like isoform X1
[Cicer arietinum]
Length = 1639
Score = 95.5 bits (236), Expect = 6e-18
Identities = 51/94 (54%), Positives = 64/94 (68%)
Frame = +1
Query: 1 GVASFSNLNMDLLDDTRIHPESYELANNLAKDVYRDDALKEANDMDDMLEKVIEHVKKNP 180
G+A+ S+ +DLLDDTRIHPESY LA LAKDVY +D +AND DD LE IEHV+ P
Sbjct: 1005 GLAASSSQFIDLLDDTRIHPESYILAQELAKDVYEEDGTGDANDDDDALEMAIEHVRDRP 1064
Query: 181 HKLEVFDIDEYANNIFDQYGKNKRETLYDIKMEL 282
L+ D++EYA + ++K ET YDIK EL
Sbjct: 1065 SYLKNLDVEEYAAG---KERQDKIETFYDIKREL 1095
>ref|XP_002267338.2| PREDICTED: transcription elongation factor SPT6-like [Vitis vinifera]
Length = 1891
Score = 94.7 bits (234), Expect = 1e-17
Identities = 56/95 (58%), Positives = 69/95 (72%), Gaps = 1/95 (1%)
Frame = +1
Query: 1 GVASFSNLNMDLLDDTRIHPESYELANNLAKDVYRDDALKEANDMDDM-LEKVIEHVKKN 177
G+AS S+ NMDLLDDTRIHPESY LA LAKDVY+ E +++DD+ LE I +V+ +
Sbjct: 1086 GMASASS-NMDLLDDTRIHPESYNLAKILAKDVYK---CFENDEIDDVVLEMAIGYVRNH 1141
Query: 178 PHKLEVFDIDEYANNIFDQYGKNKRETLYDIKMEL 282
P LE I EYA + ++GKNKRETLYDIKMEL
Sbjct: 1142 PKYLEDLKIFEYAKDYEIKHGKNKRETLYDIKMEL 1176
>emb|CBI40599.3| unnamed protein product [Vitis vinifera]
Length = 713
Score = 94.7 bits (234), Expect = 1e-17
Identities = 56/95 (58%), Positives = 69/95 (72%), Gaps = 1/95 (1%)
Frame = +1
Query: 1 GVASFSNLNMDLLDDTRIHPESYELANNLAKDVYRDDALKEANDMDDM-LEKVIEHVKKN 177
G+AS S+ NMDLLDDTRIHPESY LA LAKDVY+ E +++DD+ LE I +V+ +
Sbjct: 194 GMASASS-NMDLLDDTRIHPESYNLAKILAKDVYK---CFENDEIDDVVLEMAIGYVRNH 249
Query: 178 PHKLEVFDIDEYANNIFDQYGKNKRETLYDIKMEL 282
P LE I EYA + ++GKNKRETLYDIKMEL
Sbjct: 250 PKYLEDLKIFEYAKDYEIKHGKNKRETLYDIKMEL 284
>emb|CBI40596.3| unnamed protein product [Vitis vinifera]
Length = 1408
Score = 94.7 bits (234), Expect = 1e-17
Identities = 56/95 (58%), Positives = 69/95 (72%), Gaps = 1/95 (1%)
Frame = +1
Query: 1 GVASFSNLNMDLLDDTRIHPESYELANNLAKDVYRDDALKEANDMDDM-LEKVIEHVKKN 177
G+AS S+ NMDLLDDTRIHPESY LA LAKDVY+ E +++DD+ LE I +V+ +
Sbjct: 918 GMASASS-NMDLLDDTRIHPESYNLAKILAKDVYK---CFENDEIDDVVLEMAIGYVRNH 973
Query: 178 PHKLEVFDIDEYANNIFDQYGKNKRETLYDIKMEL 282
P LE I EYA + ++GKNKRETLYDIKMEL
Sbjct: 974 PKYLEDLKIFEYAKDYEIKHGKNKRETLYDIKMEL 1008
>ref|XP_006654589.1| PREDICTED: transcription elongation factor SPT6-like [Oryza
brachyantha]
Length = 1633
Score = 93.6 bits (231), Expect = 2e-17
Identities = 52/95 (54%), Positives = 67/95 (70%), Gaps = 1/95 (1%)
Frame = +1
Query: 1 GVASFSNLNMDLLDDTRIHPESYELANNLAKDVYRDDALKEANDM-DDMLEKVIEHVKKN 177
G A+ S +DLL+DTRIHPESY LA LAKDVY ++A EAN+M DD E IEHV++N
Sbjct: 1017 GGAAASAQIIDLLEDTRIHPESYALAKTLAKDVYAEEAPHEANEMDDDEQEMAIEHVREN 1076
Query: 178 PHKLEVFDIDEYANNIFDQYGKNKRETLYDIKMEL 282
P LE DI EY ++ +++ +K ETL DIK+EL
Sbjct: 1077 PRMLESLDIREYMKSMPEEF--HKEETLKDIKLEL 1109
>ref|XP_003561333.1| PREDICTED: transcription elongation factor SPT6-like [Brachypodium
distachyon]
Length = 1389
Score = 93.6 bits (231), Expect = 2e-17
Identities = 52/91 (57%), Positives = 64/91 (70%), Gaps = 6/91 (6%)
Frame = +1
Query: 28 MDLLDDTRIHPESYELANNLAKDVYRDDA-LKEAN-----DMDDMLEKVIEHVKKNPHKL 189
+DLL+DTRIHPESY LA NLAKDVY +DA +EAN D DD E IEHV++ P L
Sbjct: 940 IDLLEDTRIHPESYALAKNLAKDVYAEDAPSREANDGMDMDNDDQQEMAIEHVRERPQML 999
Query: 190 EVFDIDEYANNIFDQYGKNKRETLYDIKMEL 282
+ DIDE+ +I +++ NKRETL DIK EL
Sbjct: 1000 KALDIDEWMRSIPEEF--NKRETLLDIKREL 1028
>gb|EMS61141.1| Transcription elongation factor SPT6 [Triticum urartu]
Length = 1650
Score = 92.4 bits (228), Expect = 5e-17
Identities = 54/95 (56%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Frame = +1
Query: 1 GVASFSNLNMDLLDDTRIHPESYELANNLAKDVYRDDALKEANDM-DDMLEKVIEHVKKN 177
G A+ S +DLL+DTRIHPESY LA NLAKDV +D EAN+M DD E IEHV++
Sbjct: 1030 GAAAASAQIIDLLEDTRIHPESYALAKNLAKDVCAEDG-PEANEMDDDEQEMAIEHVREK 1088
Query: 178 PHKLEVFDIDEYANNIFDQYGKNKRETLYDIKMEL 282
+LE DIDEY+ +I G +KRETL DIK+EL
Sbjct: 1089 QEQLERLDIDEYSRSI----GDDKRETLLDIKLEL 1119
>gb|EMT25860.1| Transcription elongation factor SPT6 [Aegilops tauschii]
Length = 1561
Score = 91.3 bits (225), Expect = 1e-16
Identities = 54/95 (56%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Frame = +1
Query: 1 GVASFSNLNMDLLDDTRIHPESYELANNLAKDVYRDDALKEANDM-DDMLEKVIEHVKKN 177
G A+ S +DLL+DTRIHPESY LA NLAKDV D L EAN+M DD E IEHV++
Sbjct: 940 GAAAASAQIIDLLEDTRIHPESYALAKNLAKDVCAADGL-EANEMDDDEQEMAIEHVREK 998
Query: 178 PHKLEVFDIDEYANNIFDQYGKNKRETLYDIKMEL 282
+L+ DIDEY+ +I G +KRETL DIK+EL
Sbjct: 999 QDQLDRLDIDEYSRSI----GDDKRETLLDIKLEL 1029
>gb|EXC30727.1| Transcription elongation factor SPT6 [Morus notabilis]
Length = 1638
Score = 90.1 bits (222), Expect = 3e-16
Identities = 50/94 (53%), Positives = 63/94 (67%)
Frame = +1
Query: 1 GVASFSNLNMDLLDDTRIHPESYELANNLAKDVYRDDALKEANDMDDMLEKVIEHVKKNP 180
G+A+ S+ +DLLDDTRIHPESY LA LAKDVY +D AND +D LE IEHV+ P
Sbjct: 995 GLAASSSQFIDLLDDTRIHPESYALAQELAKDVYDEDG---ANDDEDALEMAIEHVRDRP 1051
Query: 181 HKLEVFDIDEYANNIFDQYGKNKRETLYDIKMEL 282
L+ ++EYA + + +NK ET YDIK EL
Sbjct: 1052 SVLKTLAVEEYAKS---KNRENKIETFYDIKREL 1082
>ref|XP_004961640.1| PREDICTED: transcription elongation factor SPT6-like [Setaria
italica]
Length = 1653
Score = 90.1 bits (222), Expect = 3e-16
Identities = 50/95 (52%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Frame = +1
Query: 1 GVASFSNLNMDLLDDTRIHPESYELANNLAKDVYRDDALKEANDM-DDMLEKVIEHVKKN 177
G A+ S +DLL+DTRIHPESY +A NLAKDVY + A + N+M DD E IEHV++N
Sbjct: 998 GAAAASAQIIDLLEDTRIHPESYVIAKNLAKDVYAESAPHDVNEMDDDEQEMAIEHVREN 1057
Query: 178 PHKLEVFDIDEYANNIFDQYGKNKRETLYDIKMEL 282
L+ DIDEY +I +++ K+ETL DIK EL
Sbjct: 1058 QGLLKGLDIDEYIKSISEEF--RKKETLKDIKHEL 1090