BLASTX nr result

ID: Zingiber23_contig00049812 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00049812
         (258 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O82627.1|SSG1_ANTMA RecName: Full=Granule-bound starch syntha...    57   3e-06
ref|XP_004162962.1| PREDICTED: LOW QUALITY PROTEIN: granule-boun...    57   3e-06
ref|XP_004145874.1| PREDICTED: granule-bound starch synthase 1, ...    57   3e-06
ref|XP_002461889.1| hypothetical protein SORBIDRAFT_02g009870 [S...    56   4e-06
ref|XP_003569238.1| PREDICTED: granule-bound starch synthase 1b,...    55   9e-06

>sp|O82627.1|SSG1_ANTMA RecName: Full=Granule-bound starch synthase 1,
           chloroplastic/amyloplastic; AltName: Full=Granule-bound
           starch synthase I; Short=GBSS-I; Flags: Precursor
           gi|3688123|emb|CAA06958.1| granule-bound starch synthase
           [Antirrhinum majus]
          Length = 608

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/31 (87%), Positives = 28/31 (90%)
 Frame = -3

Query: 256 KFLLSLGVEGSEAGIDGEEIAPLAKENVATP 164
           K LLSLGV GSE G+DGEEIAPLAKENVATP
Sbjct: 578 KMLLSLGVSGSEPGVDGEEIAPLAKENVATP 608


>ref|XP_004162962.1| PREDICTED: LOW QUALITY PROTEIN: granule-bound starch synthase 1,
           chloroplastic/amyloplastic-like [Cucumis sativus]
          Length = 614

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/31 (87%), Positives = 29/31 (93%)
 Frame = -3

Query: 256 KFLLSLGVEGSEAGIDGEEIAPLAKENVATP 164
           KFLL LGVE S+AGI+GEEIAPLAKENVATP
Sbjct: 584 KFLLGLGVENSQAGIEGEEIAPLAKENVATP 614


>ref|XP_004145874.1| PREDICTED: granule-bound starch synthase 1,
           chloroplastic/amyloplastic-like [Cucumis sativus]
          Length = 614

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/31 (87%), Positives = 29/31 (93%)
 Frame = -3

Query: 256 KFLLSLGVEGSEAGIDGEEIAPLAKENVATP 164
           KFLL LGVE S+AGI+GEEIAPLAKENVATP
Sbjct: 584 KFLLGLGVENSQAGIEGEEIAPLAKENVATP 614


>ref|XP_002461889.1| hypothetical protein SORBIDRAFT_02g009870 [Sorghum bicolor]
           gi|145202756|gb|ABP35819.1| granule-bound starch
           synthase II precursor [Sorghum bicolor]
           gi|241925266|gb|EER98410.1| hypothetical protein
           SORBIDRAFT_02g009870 [Sorghum bicolor]
          Length = 607

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 27/29 (93%), Positives = 28/29 (96%)
 Frame = -3

Query: 250 LLSLGVEGSEAGIDGEEIAPLAKENVATP 164
           LL LGVEGS+AGIDGEEIAPLAKENVATP
Sbjct: 579 LLGLGVEGSQAGIDGEEIAPLAKENVATP 607


>ref|XP_003569238.1| PREDICTED: granule-bound starch synthase 1b,
           chloroplastic/amyloplastic-like [Brachypodium
           distachyon]
          Length = 604

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = -3

Query: 250 LLSLGVEGSEAGIDGEEIAPLAKENVATP 164
           LL LGVEGS+AGIDGEEIAPLAK+NVATP
Sbjct: 576 LLGLGVEGSQAGIDGEEIAPLAKQNVATP 604


Top