BLASTX nr result
ID: Zingiber23_contig00049808
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00049808
(237 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tpg|DAA37181.1| TPA: putative DNA-directed RNA polymerase family... 97 3e-18
ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [S... 96 4e-18
ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III s... 96 6e-18
gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japo... 96 6e-18
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g... 96 6e-18
ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III s... 93 3e-17
ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III s... 90 3e-16
ref|XP_003570766.1| PREDICTED: DNA-directed RNA polymerase III s... 84 3e-14
gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao] 79 8e-13
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s... 78 1e-12
ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr... 78 1e-12
emb|CBI16226.3| unnamed protein product [Vitis vinifera] 78 1e-12
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 78 1e-12
ref|XP_002974416.1| hypothetical protein SELMODRAFT_442419 [Sela... 78 1e-12
ref|XP_002985715.1| hypothetical protein SELMODRAFT_446351 [Sela... 78 1e-12
ref|XP_001757221.1| predicted protein [Physcomitrella patens] gi... 77 2e-12
gb|ESW04135.1| hypothetical protein PHAVU_011G070100g [Phaseolus... 76 4e-12
ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III s... 75 7e-12
gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Mor... 75 9e-12
gb|EMJ09344.1| hypothetical protein PRUPE_ppa024521mg, partial [... 75 9e-12
>tpg|DAA37181.1| TPA: putative DNA-directed RNA polymerase family protein [Zea mays]
Length = 1030
Score = 96.7 bits (239), Expect = 3e-18
Identities = 48/78 (61%), Positives = 57/78 (73%)
Frame = -3
Query: 235 EKFIVTNIAIPPVSIRPSALVDAGASSNEDSITIILKGIINTNSVLREDLEGAVPPFKCL 56
EK IVT IA+PPV IRPS +V +SNEDSIT+ILK I+NTNS+L+E L P KC
Sbjct: 242 EKLIVTEIAVPPVPIRPSVVVGNSRTSNEDSITVILKSIVNTNSILKETLHTGGPFTKCF 301
Query: 55 ELWDALQNQVVEYVNSEA 2
+ W LQ QVVEYVNS+A
Sbjct: 302 DCWQYLQLQVVEYVNSDA 319
>ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor]
gi|241937900|gb|EES11045.1| hypothetical protein
SORBIDRAFT_06g021120 [Sorghum bicolor]
Length = 1391
Score = 96.3 bits (238), Expect = 4e-18
Identities = 47/78 (60%), Positives = 58/78 (74%)
Frame = -3
Query: 235 EKFIVTNIAIPPVSIRPSALVDAGASSNEDSITIILKGIINTNSVLREDLEGAVPPFKCL 56
EK IV+ IA+PPV IRPS +V + +SNEDSIT+ILK I+NTNS+L+E L P KC
Sbjct: 242 EKLIVSEIAVPPVPIRPSVVVGSSRTSNEDSITVILKSIVNTNSILKETLHTGGPFTKCF 301
Query: 55 ELWDALQNQVVEYVNSEA 2
+ W LQ QVVEYVNS+A
Sbjct: 302 DCWQYLQLQVVEYVNSDA 319
>ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Oryza
brachyantha]
Length = 1389
Score = 95.5 bits (236), Expect = 6e-18
Identities = 47/78 (60%), Positives = 56/78 (71%)
Frame = -3
Query: 235 EKFIVTNIAIPPVSIRPSALVDAGASSNEDSITIILKGIINTNSVLREDLEGAVPPFKCL 56
EK IVT IA+PPV IRPS V G SNEDSIT+ILK I NTNS+L+E+L+ KC
Sbjct: 242 EKLIVTEIAVPPVPIRPSVFVAGGRMSNEDSITVILKSIANTNSILKENLQTGGQFMKCF 301
Query: 55 ELWDALQNQVVEYVNSEA 2
+ W LQ QVVEY+NS+A
Sbjct: 302 DCWQHLQLQVVEYINSDA 319
>gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japonica Group]
Length = 1321
Score = 95.5 bits (236), Expect = 6e-18
Identities = 47/78 (60%), Positives = 56/78 (71%)
Frame = -3
Query: 235 EKFIVTNIAIPPVSIRPSALVDAGASSNEDSITIILKGIINTNSVLREDLEGAVPPFKCL 56
EK IVT IA+PPV IRPS V G SNEDSIT+ILK I NTNS+L+E+L+ KC
Sbjct: 243 EKLIVTEIAVPPVPIRPSVFVAGGRMSNEDSITVILKSIANTNSILKENLQTGGQFMKCF 302
Query: 55 ELWDALQNQVVEYVNSEA 2
+ W LQ QVVEY+NS+A
Sbjct: 303 DCWQHLQLQVVEYINSDA 320
>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
Japonica Group] gi|38347455|emb|CAD41360.2|
OSJNBa0076N16.24 [Oryza sativa Japonica Group]
gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
Japonica Group] gi|116310339|emb|CAH67354.1|
OSIGBa0130B08.14 [Oryza sativa Indica Group]
gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218195112|gb|EEC77539.1| hypothetical protein
OsI_16437 [Oryza sativa Indica Group]
Length = 1383
Score = 95.5 bits (236), Expect = 6e-18
Identities = 47/78 (60%), Positives = 56/78 (71%)
Frame = -3
Query: 235 EKFIVTNIAIPPVSIRPSALVDAGASSNEDSITIILKGIINTNSVLREDLEGAVPPFKCL 56
EK IVT IA+PPV IRPS V G SNEDSIT+ILK I NTNS+L+E+L+ KC
Sbjct: 242 EKLIVTEIAVPPVPIRPSVFVAGGRMSNEDSITVILKSIANTNSILKENLQTGGQFMKCF 301
Query: 55 ELWDALQNQVVEYVNSEA 2
+ W LQ QVVEY+NS+A
Sbjct: 302 DCWQHLQLQVVEYINSDA 319
>ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Brachypodium distachyon]
Length = 1392
Score = 93.2 bits (230), Expect = 3e-17
Identities = 44/78 (56%), Positives = 54/78 (69%)
Frame = -3
Query: 235 EKFIVTNIAIPPVSIRPSALVDAGASSNEDSITIILKGIINTNSVLREDLEGAVPPFKCL 56
EK I+T IA+PPV IRPS V G SNED IT IL+ I+NTNS+L+ L+ P KC
Sbjct: 242 EKLIITEIAVPPVPIRPSVFVGGGRMSNEDGITCILRNIVNTNSILKGILQNGDPLMKCF 301
Query: 55 ELWDALQNQVVEYVNSEA 2
+ W LQ QVVEY+NS+A
Sbjct: 302 DCWQLLQLQVVEYINSDA 319
>ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Setaria italica]
Length = 1397
Score = 90.1 bits (222), Expect = 3e-16
Identities = 46/78 (58%), Positives = 56/78 (71%)
Frame = -3
Query: 235 EKFIVTNIAIPPVSIRPSALVDAGASSNEDSITIILKGIINTNSVLREDLEGAVPPFKCL 56
EK IVT IA+PPV IRPS +V +SNEDSIT ILK I+NTNS+L+E L+ KC
Sbjct: 245 EKLIVTEIAVPPVPIRPSVVVGNTRTSNEDSITAILKSIVNTNSILKETLQTGGLFSKCF 304
Query: 55 ELWDALQNQVVEYVNSEA 2
+ W LQ QVVE+VNS+A
Sbjct: 305 DCWQQLQLQVVEFVNSDA 322
>ref|XP_003570766.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Brachypodium distachyon]
Length = 1400
Score = 83.6 bits (205), Expect = 3e-14
Identities = 39/78 (50%), Positives = 52/78 (66%)
Frame = -3
Query: 235 EKFIVTNIAIPPVSIRPSALVDAGASSNEDSITIILKGIINTNSVLREDLEGAVPPFKCL 56
E I+T+IA+PPV IRPS V SNEDSIT IL+ I+N NS L+ ++ P KC
Sbjct: 247 ENLIITDIAVPPVPIRPSRFVAGTTMSNEDSITSILRNIVNANSHLKLTIQDGQVPMKCF 306
Query: 55 ELWDALQNQVVEYVNSEA 2
W+ LQ+ V+EY+NS+A
Sbjct: 307 TWWEQLQDNVIEYINSDA 324
>gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao]
Length = 1395
Score = 78.6 bits (192), Expect = 8e-13
Identities = 39/77 (50%), Positives = 54/77 (70%)
Frame = -3
Query: 235 EKFIVTNIAIPPVSIRPSALVDAGASSNEDSITIILKGIINTNSVLREDLEGAVPPFKCL 56
EK I+TNIA+PP+ IRPS ++D G+ SNE+ IT LK II N+ LR++L FKCL
Sbjct: 245 EKLIITNIAVPPIPIRPSVIMD-GSQSNENDITERLKRIIQANASLRQELVETNAAFKCL 303
Query: 55 ELWDALQNQVVEYVNSE 5
W+ LQ +V +Y+NS+
Sbjct: 304 GGWEMLQVEVAQYINSD 320
>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
isoform X1 [Citrus sinensis]
gi|568870034|ref|XP_006488217.1| PREDICTED: DNA-directed
RNA polymerase III subunit rpc1-like isoform X2 [Citrus
sinensis]
Length = 1404
Score = 78.2 bits (191), Expect = 1e-12
Identities = 39/77 (50%), Positives = 56/77 (72%)
Frame = -3
Query: 235 EKFIVTNIAIPPVSIRPSALVDAGASSNEDSITIILKGIINTNSVLREDLEGAVPPFKCL 56
EK I+TNIA+PP++IRPS ++D G+ SNE+ IT LK II TN+ L+++L A FK L
Sbjct: 252 EKLIITNIAVPPIAIRPSVIMD-GSQSNENDITERLKRIIQTNASLQQELVEANSAFKSL 310
Query: 55 ELWDALQNQVVEYVNSE 5
W+ LQ +V +Y+NS+
Sbjct: 311 AGWETLQVEVAQYINSD 327
>ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina]
gi|557526635|gb|ESR37941.1| hypothetical protein
CICLE_v10027681mg [Citrus clementina]
Length = 1397
Score = 78.2 bits (191), Expect = 1e-12
Identities = 39/77 (50%), Positives = 56/77 (72%)
Frame = -3
Query: 235 EKFIVTNIAIPPVSIRPSALVDAGASSNEDSITIILKGIINTNSVLREDLEGAVPPFKCL 56
EK I+TNIA+PP++IRPS ++D G+ SNE+ IT LK II TN+ L+++L A FK L
Sbjct: 267 EKLIITNIAVPPIAIRPSVIMD-GSQSNENDITERLKRIIQTNASLQQELVEANSAFKSL 325
Query: 55 ELWDALQNQVVEYVNSE 5
W+ LQ +V +Y+NS+
Sbjct: 326 AGWETLQVEVAQYINSD 342
>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
Length = 1819
Score = 78.2 bits (191), Expect = 1e-12
Identities = 35/77 (45%), Positives = 51/77 (66%)
Frame = -3
Query: 235 EKFIVTNIAIPPVSIRPSALVDAGASSNEDSITIILKGIINTNSVLREDLEGAVPPFKCL 56
EK ++TNI +PP++IRPS +D G SNE+ +T LK II N+ L ++L+ KCL
Sbjct: 247 EKLVLTNIGVPPIAIRPSVFMDGGTQSNENDVTERLKRIIQANASLHQELQDTGSTSKCL 306
Query: 55 ELWDALQNQVVEYVNSE 5
WD LQ +V +Y+NS+
Sbjct: 307 AGWDYLQIEVAQYINSD 323
>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
vinifera]
Length = 1383
Score = 78.2 bits (191), Expect = 1e-12
Identities = 35/77 (45%), Positives = 51/77 (66%)
Frame = -3
Query: 235 EKFIVTNIAIPPVSIRPSALVDAGASSNEDSITIILKGIINTNSVLREDLEGAVPPFKCL 56
EK ++TNI +PP++IRPS +D G SNE+ +T LK II N+ L ++L+ KCL
Sbjct: 247 EKLVLTNIGVPPIAIRPSVFMDGGTQSNENDVTERLKRIIQANASLHQELQDTGSTSKCL 306
Query: 55 ELWDALQNQVVEYVNSE 5
WD LQ +V +Y+NS+
Sbjct: 307 AGWDYLQIEVAQYINSD 323
>ref|XP_002974416.1| hypothetical protein SELMODRAFT_442419 [Selaginella moellendorffii]
gi|300158014|gb|EFJ24638.1| hypothetical protein
SELMODRAFT_442419 [Selaginella moellendorffii]
Length = 1348
Score = 77.8 bits (190), Expect = 1e-12
Identities = 38/77 (49%), Positives = 51/77 (66%)
Frame = -3
Query: 235 EKFIVTNIAIPPVSIRPSALVDAGASSNEDSITIILKGIINTNSVLREDLEGAVPPFKCL 56
E+ IV ++ +PPV+IRPS +DA SNED +TI L II N+ +R LE + KC+
Sbjct: 261 EQLIVQHMPVPPVAIRPSVEMDAAVGSNEDDVTIKLMHIIEQNNQIRACLESGLSIAKCM 320
Query: 55 ELWDALQNQVVEYVNSE 5
E+WD LQ QV Y+NSE
Sbjct: 321 EIWDFLQIQVAMYINSE 337
>ref|XP_002985715.1| hypothetical protein SELMODRAFT_446351 [Selaginella moellendorffii]
gi|300146624|gb|EFJ13293.1| hypothetical protein
SELMODRAFT_446351 [Selaginella moellendorffii]
Length = 1393
Score = 77.8 bits (190), Expect = 1e-12
Identities = 38/77 (49%), Positives = 51/77 (66%)
Frame = -3
Query: 235 EKFIVTNIAIPPVSIRPSALVDAGASSNEDSITIILKGIINTNSVLREDLEGAVPPFKCL 56
E+ IV ++ +PPV+IRPS +DA SNED +TI L II N+ +R LE + KC+
Sbjct: 261 EQLIVQHMPVPPVAIRPSVEMDAAVGSNEDDVTIKLMHIIEQNNQIRACLESGLSIAKCM 320
Query: 55 ELWDALQNQVVEYVNSE 5
E+WD LQ QV Y+NSE
Sbjct: 321 EIWDFLQIQVAMYINSE 337
>ref|XP_001757221.1| predicted protein [Physcomitrella patens]
gi|162691719|gb|EDQ78080.1| predicted protein
[Physcomitrella patens]
Length = 1397
Score = 77.4 bits (189), Expect = 2e-12
Identities = 37/77 (48%), Positives = 54/77 (70%)
Frame = -3
Query: 235 EKFIVTNIAIPPVSIRPSALVDAGASSNEDSITIILKGIINTNSVLREDLEGAVPPFKCL 56
EK IVT++ +PPV+IRPS +++ A SNED IT+ L GI+N N+ LR +E + K +
Sbjct: 255 EKLIVTHLIVPPVAIRPSVEMESAAGSNEDDITVRLLGILNCNNSLRTCVEQGLAAEKTM 314
Query: 55 ELWDALQNQVVEYVNSE 5
E W+ LQ+QV + +NSE
Sbjct: 315 ETWELLQSQVSQLINSE 331
>gb|ESW04135.1| hypothetical protein PHAVU_011G070100g [Phaseolus vulgaris]
Length = 1392
Score = 76.3 bits (186), Expect = 4e-12
Identities = 37/77 (48%), Positives = 55/77 (71%)
Frame = -3
Query: 235 EKFIVTNIAIPPVSIRPSALVDAGASSNEDSITIILKGIINTNSVLREDLEGAVPPFKCL 56
EK I+TNI +PP++IRPS ++D S NE+ IT LK II N+VLR++L+ + K L
Sbjct: 247 EKLIITNIVVPPIAIRPSVVMDESLS-NENDITERLKNIIQANAVLRQELQESSVSSKFL 305
Query: 55 ELWDALQNQVVEYVNSE 5
+ W+ LQN+V +++NSE
Sbjct: 306 DGWEILQNEVAQFINSE 322
>ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Glycine max]
Length = 1391
Score = 75.5 bits (184), Expect = 7e-12
Identities = 36/77 (46%), Positives = 55/77 (71%)
Frame = -3
Query: 235 EKFIVTNIAIPPVSIRPSALVDAGASSNEDSITIILKGIINTNSVLREDLEGAVPPFKCL 56
EK I+TN+ +PP++IRPS ++D S NE+ IT LK II N+VLR++L+ + K L
Sbjct: 247 EKLIMTNVVVPPIAIRPSVVMDESLS-NENDITERLKNIIQANAVLRQELQESTFSSKFL 305
Query: 55 ELWDALQNQVVEYVNSE 5
+ WD LQN+V +++NS+
Sbjct: 306 DGWDILQNEVAQFINSD 322
>gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Morus notabilis]
Length = 1179
Score = 75.1 bits (183), Expect = 9e-12
Identities = 38/77 (49%), Positives = 52/77 (67%)
Frame = -3
Query: 235 EKFIVTNIAIPPVSIRPSALVDAGASSNEDSITIILKGIINTNSVLREDLEGAVPPFKCL 56
E I+TNI++PP++IRPS ++D G+ SNE+ +T LK II N+ LR+DL K L
Sbjct: 17 ENLILTNISVPPIAIRPSVIMD-GSQSNENDLTERLKQIIQVNATLRQDLSEGSAAAKFL 75
Query: 55 ELWDALQNQVVEYVNSE 5
E WDALQ V Y+NS+
Sbjct: 76 ENWDALQAHVALYINSD 92
>gb|EMJ09344.1| hypothetical protein PRUPE_ppa024521mg, partial [Prunus persica]
Length = 867
Score = 75.1 bits (183), Expect = 9e-12
Identities = 38/77 (49%), Positives = 52/77 (67%)
Frame = -3
Query: 235 EKFIVTNIAIPPVSIRPSALVDAGASSNEDSITIILKGIINTNSVLREDLEGAVPPFKCL 56
+ I+ NIA+PP++IRPS +VD S NE+ IT LK II +N++LR DL A KCL
Sbjct: 255 QNLIIKNIAVPPIAIRPSVIVDRSLS-NENDITERLKRIIQSNAILRRDLLEAKSAPKCL 313
Query: 55 ELWDALQNQVVEYVNSE 5
WD LQ +V +Y+NS+
Sbjct: 314 ASWDILQVEVAQYINSD 330