BLASTX nr result
ID: Zingiber23_contig00049753
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00049753
(285 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMT16749.1| hypothetical protein F775_04798 [Aegilops tauschii] 94 2e-17
ref|XP_006852835.1| hypothetical protein AMTR_s00033p00187020 [A... 86 7e-15
ref|XP_006662289.1| PREDICTED: pentatricopeptide repeat-containi... 75 7e-12
gb|AFW78087.1| hypothetical protein ZEAMMB73_223692 [Zea mays] 69 6e-10
gb|EOX91189.1| Tetratricopeptide repeat-like superfamily protein... 68 1e-09
ref|NP_001064427.1| Os10g0358700 [Oryza sativa Japonica Group] g... 68 1e-09
ref|XP_006466716.1| PREDICTED: pentatricopeptide repeat-containi... 66 4e-09
ref|XP_006425741.1| hypothetical protein CICLE_v10027297mg [Citr... 66 4e-09
ref|XP_006383251.1| hypothetical protein POPTR_0005s12880g [Popu... 65 7e-09
gb|AFW81860.1| hypothetical protein ZEAMMB73_632535 [Zea mays] 65 7e-09
emb|CBI17575.3| unnamed protein product [Vitis vinifera] 60 2e-07
ref|XP_002269078.1| PREDICTED: pentatricopeptide repeat-containi... 60 2e-07
ref|XP_004505281.1| PREDICTED: pentatricopeptide repeat-containi... 59 7e-07
ref|XP_004503279.1| PREDICTED: pentatricopeptide repeat-containi... 59 7e-07
gb|EMJ05523.1| hypothetical protein PRUPE_ppa004294mg [Prunus pe... 58 1e-06
ref|XP_003631109.1| Pentatricopeptide repeat-containing protein ... 58 1e-06
ref|NP_178248.2| pentatricopeptide repeat-containing protein [Ar... 57 3e-06
gb|AAC67316.1| hypothetical protein [Arabidopsis thaliana] gi|20... 57 3e-06
ref|XP_002525094.1| pentatricopeptide repeat-containing protein,... 57 3e-06
ref|XP_004165472.1| PREDICTED: pentatricopeptide repeat-containi... 56 4e-06
>gb|EMT16749.1| hypothetical protein F775_04798 [Aegilops tauschii]
Length = 429
Score = 94.0 bits (232), Expect = 2e-17
Identities = 45/94 (47%), Positives = 70/94 (74%)
Frame = +3
Query: 3 GLCSYAENIFYSLPMEQNIITCTALMDAFFQAGETEKALDLYSKLRTQNLPISSGTYEVM 182
G SYA +IF P +QN+IT TALM+A+FQAGE +KAL+L+S++ T + S+GTYEV+
Sbjct: 321 GHSSYAAHIFGLSPADQNVITYTALMNAYFQAGEVDKALELFSQMITNEISASAGTYEVL 380
Query: 183 ILGLQRCGKFADAEVCRKEKKKIRGNKYYQDKIS 284
I GLQ+ G+ D++ R+E+ +++ ++ Y+DK S
Sbjct: 381 IYGLQKAGRKQDSDRYRRERMEMQWHRQYRDKHS 414
>ref|XP_006852835.1| hypothetical protein AMTR_s00033p00187020 [Amborella trichopoda]
gi|548856449|gb|ERN14302.1| hypothetical protein
AMTR_s00033p00187020 [Amborella trichopoda]
Length = 579
Score = 85.5 bits (210), Expect = 7e-15
Identities = 42/90 (46%), Positives = 63/90 (70%)
Frame = +3
Query: 3 GLCSYAENIFYSLPMEQNIITCTALMDAFFQAGETEKALDLYSKLRTQNLPISSGTYEVM 182
G+ S+ E IFYSLP EQN +T TALMDA ++G +KAL+LYS + + SSGT+EV+
Sbjct: 469 GMPSFCERIFYSLPGEQNNVTYTALMDAQIKSGFLDKALELYSSMIRHGISASSGTFEVL 528
Query: 183 ILGLQRCGKFADAEVCRKEKKKIRGNKYYQ 272
+GL+ G+ +AE+ RK++KK+ Y++
Sbjct: 529 GMGLEGAGRSHEAEIFRKQQKKLACTGYHK 558
>ref|XP_006662289.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g01390-like, partial [Oryza brachyantha]
Length = 417
Score = 75.5 bits (184), Expect = 7e-12
Identities = 38/92 (41%), Positives = 59/92 (64%)
Frame = +3
Query: 3 GLCSYAENIFYSLPMEQNIITCTALMDAFFQAGETEKALDLYSKLRTQNLPISSGTYEVM 182
G S A IF L ++N++T TALM A+FQAG+ +KAL L+S++ + GTYEV+
Sbjct: 309 GHSSNAVRIFGLLTTDRNVVTYTALMSAYFQAGKVDKALQLFSQMSANGISACRGTYEVV 368
Query: 183 ILGLQRCGKFADAEVCRKEKKKIRGNKYYQDK 278
I GLQ G+ D+E R+E+ +++ N Y ++
Sbjct: 369 IHGLQMAGRKQDSEHYRRERMEMQWNLQYHNE 400
>gb|AFW78087.1| hypothetical protein ZEAMMB73_223692 [Zea mays]
Length = 546
Score = 68.9 bits (167), Expect = 6e-10
Identities = 32/89 (35%), Positives = 60/89 (67%)
Frame = +3
Query: 3 GLCSYAENIFYSLPMEQNIITCTALMDAFFQAGETEKALDLYSKLRTQNLPISSGTYEVM 182
G + A +IF L ++N+++ TAL++A+FQAG+ + ALDL++++RT + GTYEV+
Sbjct: 438 GQSACAAHIFGLLTADKNVVSYTALINAYFQAGKVDGALDLFTQMRTNRISACLGTYEVL 497
Query: 183 ILGLQRCGKFADAEVCRKEKKKIRGNKYY 269
I GL++ G +++ R+E+ ++ + Y
Sbjct: 498 IHGLEKAGLKQESDYYRRERMNMQWHLQY 526
>gb|EOX91189.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
Length = 577
Score = 68.2 bits (165), Expect = 1e-09
Identities = 34/89 (38%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Frame = +3
Query: 18 AENIFYSLPMEQNII-TCTALMDAFFQAGETEKALDLYSKLRTQNLPISSGTYEVMILGL 194
A IF LP +Q + T TAL+ +F AG +K L +Y +R++ + S GTY V++ GL
Sbjct: 472 AAKIFNLLPDDQKCVATYTALVGVYFAAGTADKGLKIYKTMRSKGISPSLGTYCVLLAGL 531
Query: 195 QRCGKFADAEVCRKEKKKIRGNKYYQDKI 281
++ G+ + AE RKEKK ++ + Y+++ I
Sbjct: 532 EKLGRVSTAETYRKEKKSLQKDAYFRESI 560
>ref|NP_001064427.1| Os10g0358700 [Oryza sativa Japonica Group]
gi|110288952|gb|AAP53278.2| pentatricopeptide, putative,
expressed [Oryza sativa Japonica Group]
gi|110288953|gb|ABG66030.1| pentatricopeptide, putative,
expressed [Oryza sativa Japonica Group]
gi|113639036|dbj|BAF26341.1| Os10g0358700 [Oryza sativa
Japonica Group] gi|215712262|dbj|BAG94389.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|215715192|dbj|BAG94943.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 548
Score = 68.2 bits (165), Expect = 1e-09
Identities = 35/94 (37%), Positives = 59/94 (62%)
Frame = +3
Query: 3 GLCSYAENIFYSLPMEQNIITCTALMDAFFQAGETEKALDLYSKLRTQNLPISSGTYEVM 182
G S A IF L ++N++T TALM A+FQ G+ +KAL L+ ++ + GTYEV+
Sbjct: 440 GHSSTAVRIFGLLTTDKNVVTYTALMSAYFQDGKVDKALQLFLQMSANGVSACPGTYEVL 499
Query: 183 ILGLQRCGKFADAEVCRKEKKKIRGNKYYQDKIS 284
I GLQ G+ ++E R+E+ +++ + Y+++ S
Sbjct: 500 IHGLQMAGRKQESEHYRRERMEMQWHLQYRNEHS 533
>ref|XP_006466716.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g01390-like [Citrus sinensis]
Length = 582
Score = 66.2 bits (160), Expect = 4e-09
Identities = 34/89 (38%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Frame = +3
Query: 18 AENIFYSLPMEQNII-TCTALMDAFFQAGETEKALDLYSKLRTQNLPISSGTYEVMILGL 194
A IF LP +Q T TAL+ +F AG +KAL +Y + + + S GT+ V++ GL
Sbjct: 477 AAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 536
Query: 195 QRCGKFADAEVCRKEKKKIRGNKYYQDKI 281
++ G+ +DAE+ RKEKK I+ + +D +
Sbjct: 537 EKLGRVSDAEIYRKEKKSIQADALSKDTV 565
>ref|XP_006425741.1| hypothetical protein CICLE_v10027297mg [Citrus clementina]
gi|557527731|gb|ESR38981.1| hypothetical protein
CICLE_v10027297mg [Citrus clementina]
Length = 522
Score = 66.2 bits (160), Expect = 4e-09
Identities = 34/89 (38%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Frame = +3
Query: 18 AENIFYSLPMEQNII-TCTALMDAFFQAGETEKALDLYSKLRTQNLPISSGTYEVMILGL 194
A IF LP +Q T TAL+ +F AG +KAL +Y + + + S GT+ V++ GL
Sbjct: 417 AAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 476
Query: 195 QRCGKFADAEVCRKEKKKIRGNKYYQDKI 281
++ G+ +DAE+ RKEKK I+ + +D +
Sbjct: 477 EKLGRVSDAEIYRKEKKSIQADALSKDTV 505
>ref|XP_006383251.1| hypothetical protein POPTR_0005s12880g [Populus trichocarpa]
gi|550338833|gb|ERP61048.1| hypothetical protein
POPTR_0005s12880g [Populus trichocarpa]
Length = 517
Score = 65.5 bits (158), Expect = 7e-09
Identities = 34/89 (38%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Frame = +3
Query: 18 AENIFYSLPMEQNII-TCTALMDAFFQAGETEKALDLYSKLRTQNLPISSGTYEVMILGL 194
A IF LP Q T TAL+ FF AG +KAL +Y ++ + + S GTY V++ GL
Sbjct: 412 AVKIFDLLPEGQKCTATYTALVSVFFSAGSPQKALQIYENMKREGIHPSLGTYNVLLAGL 471
Query: 195 QRCGKFADAEVCRKEKKKIRGNKYYQDKI 281
+ G+ ++A+ RKEKK + N ++Q+ +
Sbjct: 472 ESSGRISEAKTYRKEKKGLLINNHHQNSV 500
>gb|AFW81860.1| hypothetical protein ZEAMMB73_632535 [Zea mays]
Length = 459
Score = 65.5 bits (158), Expect = 7e-09
Identities = 33/93 (35%), Positives = 57/93 (61%)
Frame = +3
Query: 6 LCSYAENIFYSLPMEQNIITCTALMDAFFQAGETEKALDLYSKLRTQNLPISSGTYEVMI 185
L + A +IF L ++N++ TAL+DA+ QAG + ALDL++++RT + GTYEV+I
Sbjct: 367 LSACAPHIFGLLTADKNVVLYTALIDAYLQAGIVDGALDLFTQMRTNRISACLGTYEVLI 426
Query: 186 LGLQRCGKFADAEVCRKEKKKIRGNKYYQDKIS 284
GL+ G ++ R+E+ ++ + Y + S
Sbjct: 427 HGLENAGLKQESGYYRRERMNMKWHLQYHGQCS 459
>emb|CBI17575.3| unnamed protein product [Vitis vinifera]
Length = 656
Score = 60.5 bits (145), Expect = 2e-07
Identities = 30/90 (33%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Frame = +3
Query: 18 AENIFYSLPMEQN-IITCTALMDAFFQAGETEKALDLYSKLRTQNLPISSGTYEVMILGL 194
A +F LP +Q TAL+ A+F +G +K L +Y ++ + + + GTY +++ GL
Sbjct: 551 AAKVFGLLPDDQKGTAAYTALISAYFSSGNVDKGLKIYKTMQRKRIHPALGTYNLLLAGL 610
Query: 195 QRCGKFADAEVCRKEKKKIRGNKYYQDKIS 284
++ G+ +AE+ RKEKK + + + QD +S
Sbjct: 611 EKKGRAREAEIYRKEKKTLHTHGHSQDIVS 640
>ref|XP_002269078.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g01390-like [Vitis vinifera]
Length = 519
Score = 60.5 bits (145), Expect = 2e-07
Identities = 30/90 (33%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Frame = +3
Query: 18 AENIFYSLPMEQN-IITCTALMDAFFQAGETEKALDLYSKLRTQNLPISSGTYEVMILGL 194
A +F LP +Q TAL+ A+F +G +K L +Y ++ + + + GTY +++ GL
Sbjct: 414 AAKVFGLLPDDQKGTAAYTALISAYFSSGNVDKGLKIYKTMQRKRIHPALGTYNLLLAGL 473
Query: 195 QRCGKFADAEVCRKEKKKIRGNKYYQDKIS 284
++ G+ +AE+ RKEKK + + + QD +S
Sbjct: 474 EKKGRAREAEIYRKEKKTLHTHGHSQDIVS 503
>ref|XP_004505281.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g01390-like [Cicer arietinum]
Length = 166
Score = 58.9 bits (141), Expect = 7e-07
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Frame = +3
Query: 12 SYAENIFYSLPMEQNII-TCTALMDAFFQAGETEKALDLYSKLRTQNLPISSGTYEVMIL 188
S+A IF LP T TAL+ + A KAL++Y + + + +SGTY +++
Sbjct: 59 SFALKIFNLLPDNHKCTATYTALISTYLSARRVNKALEIYKIMCQKGICPTSGTYNILVA 118
Query: 189 GLQRCGKFADAEVCRKEKKKIRGNKYYQDKIS 284
GL+R G++++AE+ RK KK + N ++ +S
Sbjct: 119 GLERNGRYSEAELHRKSKKNLHSNIGTRESVS 150
>ref|XP_004503279.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g01390-like [Cicer arietinum]
Length = 580
Score = 58.9 bits (141), Expect = 7e-07
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Frame = +3
Query: 12 SYAENIFYSLPMEQNII-TCTALMDAFFQAGETEKALDLYSKLRTQNLPISSGTYEVMIL 188
S+A IF LP T TAL+ + A KAL++Y + + + +SGTY +++
Sbjct: 473 SFALKIFNLLPDNHKCTATYTALISTYLSARRVNKALEIYKIMCQKGICPTSGTYNILVA 532
Query: 189 GLQRCGKFADAEVCRKEKKKIRGNKYYQDKIS 284
GL+R G++++AE+ RK KK + N ++ +S
Sbjct: 533 GLERNGRYSEAELHRKSKKNLHSNIGTRESVS 564
>gb|EMJ05523.1| hypothetical protein PRUPE_ppa004294mg [Prunus persica]
Length = 518
Score = 58.2 bits (139), Expect = 1e-06
Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Frame = +3
Query: 18 AENIFYSLPMEQNIITC-TALMDAFFQAGETEKALDLYSKLRTQNLPISSGTYEVMILGL 194
A +F LP + T TALM +F AG ++ L ++ +R + GTY V++ GL
Sbjct: 413 AAKVFNLLPDDHKCTTTYTALMGVYFSAGSADRGLKIFDTMRGEGFLPFLGTYNVLLAGL 472
Query: 195 QRCGKFADAEVCRKEKKKIRGNKYYQDKI 281
Q+ G+ +AE+ RKEKK ++ + Q+ +
Sbjct: 473 QKLGRVREAEMYRKEKKSLQSDGPSQNAV 501
>ref|XP_003631109.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525131|gb|AET05585.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 687
Score = 57.8 bits (138), Expect = 1e-06
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Frame = +3
Query: 12 SYAENIFYSLPMEQNII-TCTALMDAFFQAGETEKALDLYSKLRTQNLPISSGTYEVMIL 188
S A IF LP + T TAL+ +F A KAL++Y + + +SGT+ +++
Sbjct: 580 SIALKIFNLLPDNHKCVATYTALISIYFSARRVNKALEIYKIMCQKGNCPTSGTFNILVA 639
Query: 189 GLQRCGKFADAEVCRKEKKKIRGNKYYQDKIS 284
GL+R G+F++A V RK KK + N Q+ +S
Sbjct: 640 GLERNGRFSEAGVHRKAKKNLNSNIGSQENLS 671
>ref|NP_178248.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546783|sp|Q9ZU29.2|PP139_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g01390 gi|330250351|gb|AEC05445.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 57.0 bits (136), Expect = 3e-06
Identities = 34/96 (35%), Positives = 55/96 (57%), Gaps = 8/96 (8%)
Frame = +3
Query: 18 AENIFYSLPMEQN-IITCTALMDAFFQAGETEKALDLYSKLRTQNLPISSGTYEVMILGL 194
A ++F LP +Q + TALMD + AG EKA+ + ++R + + S GTY+V++ GL
Sbjct: 472 AADVFDLLPDDQKGVAAYTALMDVYISAGSPEKAMKILREMREREIMPSLGTYDVLLSGL 531
Query: 195 QRCGKF-ADAEVCRKEKK------KIRGNKYYQDKI 281
++ F + + RKEKK + R N + +DKI
Sbjct: 532 EKTSDFQKEVALLRKEKKSLVASARFRENVHVEDKI 567
>gb|AAC67316.1| hypothetical protein [Arabidopsis thaliana]
gi|20197582|gb|AAM15140.1| hypothetical protein
[Arabidopsis thaliana]
Length = 218
Score = 57.0 bits (136), Expect = 3e-06
Identities = 34/96 (35%), Positives = 55/96 (57%), Gaps = 8/96 (8%)
Frame = +3
Query: 18 AENIFYSLPMEQN-IITCTALMDAFFQAGETEKALDLYSKLRTQNLPISSGTYEVMILGL 194
A ++F LP +Q + TALMD + AG EKA+ + ++R + + S GTY+V++ GL
Sbjct: 113 AADVFDLLPDDQKGVAAYTALMDVYISAGSPEKAMKILREMREREIMPSLGTYDVLLSGL 172
Query: 195 QRCGKF-ADAEVCRKEKK------KIRGNKYYQDKI 281
++ F + + RKEKK + R N + +DKI
Sbjct: 173 EKTSDFQKEVALLRKEKKSLVASARFRENVHVEDKI 208
>ref|XP_002525094.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223535553|gb|EEF37221.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 472
Score = 56.6 bits (135), Expect = 3e-06
Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +3
Query: 18 AENIFYSLPMEQNII-TCTALMDAFFQAGETEKALDLYSKLRTQNLPISSGTYEVMILGL 194
A IF LP EQ T TA++ +F AG KAL +Y ++ ++ S GTY V++ GL
Sbjct: 367 AAKIFDLLPDEQKCTATYTAMIGVYFSAGSAAKALKIYKTMKKNSINPSLGTYNVLLAGL 426
Query: 195 QRCGKFADAEVCRKEKKKI 251
++ G+ + + RKEK+ +
Sbjct: 427 EKSGRVCETDNFRKEKRSL 445
>ref|XP_004165472.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g01390-like [Cucumis sativus]
Length = 737
Score = 56.2 bits (134), Expect = 4e-06
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +3
Query: 3 GLCSYAENIFYSLPMEQNII-TCTALMDAFFQAGETEKALDLYSKLRTQNLPISSGTYEV 179
G YA +F LP E T TAL+D +F AG + K L ++ +R + S GTY V
Sbjct: 544 GKPQYARKVFNMLPEELKCTATYTALVDGYFSAGSSGKGLKIFETMRKKGFTPSLGTYNV 603
Query: 180 MILGLQRCGKFADAEVCRKEKK 245
++ GL + G+ + + R+EKK
Sbjct: 604 LLNGLAKNGRGVELNIYRREKK 625