BLASTX nr result

ID: Zingiber23_contig00049741 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00049741
         (277 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB97282.1| hypothetical protein L484_024143 [Morus notabilis]      57   3e-06
ref|XP_004504769.1| PREDICTED: zinc finger protein 36, C3H1 type...    56   6e-06
emb|CAN60857.1| hypothetical protein VITISV_026075 [Vitis vinifera]    56   6e-06

>gb|EXB97282.1| hypothetical protein L484_024143 [Morus notabilis]
          Length = 362

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 38/91 (41%), Positives = 49/91 (53%), Gaps = 18/91 (19%)
 Frame = -2

Query: 276 TPVKVEVGEDLVVMDGVLV---------------SDAGSSNGRGNFKTEFGRAWDENAFC 142
           TP K   GED ++MDGVLV               S A  S G+  FKT+  R+ +++  C
Sbjct: 116 TPAKAVEGEDTLLMDGVLVIGGGKRTSSFSGSHSSSASGSAGKSLFKTDSCRSSEDSGSC 175

Query: 141 RYSSKCQ--LGKEELHNVH-DVKRKPELSAR 58
           RYSSK Q  LGKE+L + H  +K K E  AR
Sbjct: 176 RYSSKRQFVLGKEDLRSTHLIIKNKTESQAR 206


>ref|XP_004504769.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2-like isoform X1
           [Cicer arietinum] gi|502142054|ref|XP_004504770.1|
           PREDICTED: zinc finger protein 36, C3H1 type-like 2-like
           isoform X2 [Cicer arietinum]
          Length = 337

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 21/90 (23%)
 Frame = -2

Query: 276 TPVKVEVGEDLVVMDGVLV-----------SDAGSSNGRGN--------FKTEFGRAWDE 154
           TPVKV+  E+++VMD + V           S + SS G G+        +KT+  RAW+E
Sbjct: 137 TPVKVD--EEVIVMDDIQVRPMSGGKNGRSSSSSSSRGSGSSSSSSKSVYKTDICRAWEE 194

Query: 153 NAFCRYSSKCQL--GKEELHNVHDVKRKPE 70
           +  CRY+SKCQ   G+EELH    +K K E
Sbjct: 195 SGNCRYNSKCQFAHGREELHPSRLMKSKSE 224


>emb|CAN60857.1| hypothetical protein VITISV_026075 [Vitis vinifera]
          Length = 300

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 22/87 (25%)
 Frame = -2

Query: 264 VEVGEDLVVMDGVLV-------------------SDAGSSNGRGNFKTEFGRAWDENAFC 142
           V+V ED++VMDG++V                   S A +++G G +KTE  R+W++ A C
Sbjct: 94  VKVEEDVLVMDGIMVESMAGMKGMRSVSSDSSGSSSAAAASGNGLYKTEICRSWEDLASC 153

Query: 141 RYSSKCQL--GKEELHNV-HDVKRKPE 70
           RY +KCQ   GKEEL  + + ++ +PE
Sbjct: 154 RYGAKCQFAHGKEELRPLRYSMRTRPE 180


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