BLASTX nr result
ID: Zingiber23_contig00049640
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00049640
(265 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAN14535.1|AF459085_1 SNF2P [Hordeum vulgare] 113 3e-23
gb|ABR18490.1| SNF2P [Triticum turgidum] 113 3e-23
gb|AAS58484.1| SNF2P [Triticum monococcum] 113 3e-23
gb|AAS58478.1| SNF2P [Hordeum vulgare subsp. vulgare] 113 3e-23
gb|ACJ64199.1| SNF2P [Triticum turgidum] 111 9e-23
ref|XP_006347927.1| PREDICTED: chromodomain-helicase-DNA-binding... 109 4e-22
ref|XP_006347926.1| PREDICTED: chromodomain-helicase-DNA-binding... 109 4e-22
ref|XP_004229767.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain... 109 4e-22
ref|XP_003562238.1| PREDICTED: chromodomain-helicase-DNA-binding... 109 4e-22
ref|XP_004986094.1| PREDICTED: chromodomain-helicase-DNA-binding... 107 2e-21
ref|XP_004986093.1| PREDICTED: chromodomain-helicase-DNA-binding... 107 2e-21
ref|XP_006397678.1| hypothetical protein EUTSA_v10001305mg [Eutr... 107 2e-21
ref|NP_182025.2| SNF2 and helicase domain-containing protein [Ar... 107 2e-21
ref|XP_002881993.1| hypothetical protein ARALYDRAFT_483627 [Arab... 107 2e-21
ref|NP_973689.2| SNF2 and helicase domain-containing protein [Ar... 107 2e-21
ref|XP_004166129.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain... 106 3e-21
ref|XP_004140512.1| PREDICTED: chromodomain-helicase-DNA-binding... 106 3e-21
gb|EXB89101.1| Chromodomain-helicase-DNA-binding protein 1-like ... 106 4e-21
ref|XP_006650946.1| PREDICTED: chromodomain-helicase-DNA-binding... 105 5e-21
gb|AFW89901.1| hypothetical protein ZEAMMB73_126422, partial [Ze... 105 5e-21
>gb|AAN14535.1|AF459085_1 SNF2P [Hordeum vulgare]
Length = 882
Score = 113 bits (282), Expect = 3e-23
Identities = 56/87 (64%), Positives = 64/87 (73%)
Frame = -3
Query: 263 RRTKALLVERGTLTLPPVTEMTVMVPLIPLQRKVYMSILRKEXXXXXXXXXXXXXXXXXX 84
RRTKALL+E G L LPP+TE+TVMVPL PLQ+K+Y+S+LRKE
Sbjct: 271 RRTKALLIESGILELPPLTELTVMVPLAPLQKKIYLSVLRKELQTLLSFTGGSSRHQSLQ 330
Query: 83 NIVMQLRKTCSHPYLFSGIEPEPYEEG 3
NIV+QLRK CSHPYLFSGIEPEPYEEG
Sbjct: 331 NIVVQLRKACSHPYLFSGIEPEPYEEG 357
>gb|ABR18490.1| SNF2P [Triticum turgidum]
Length = 878
Score = 113 bits (282), Expect = 3e-23
Identities = 56/87 (64%), Positives = 64/87 (73%)
Frame = -3
Query: 263 RRTKALLVERGTLTLPPVTEMTVMVPLIPLQRKVYMSILRKEXXXXXXXXXXXXXXXXXX 84
RRTKALL+E G L LPP+TE+TVMVPL PLQ+K+Y+S+LRKE
Sbjct: 271 RRTKALLIESGILELPPLTELTVMVPLAPLQKKIYLSVLRKELQTLLSFTGGSSRHQSLQ 330
Query: 83 NIVMQLRKTCSHPYLFSGIEPEPYEEG 3
NIV+QLRK CSHPYLFSGIEPEPYEEG
Sbjct: 331 NIVVQLRKACSHPYLFSGIEPEPYEEG 357
>gb|AAS58484.1| SNF2P [Triticum monococcum]
Length = 882
Score = 113 bits (282), Expect = 3e-23
Identities = 56/87 (64%), Positives = 64/87 (73%)
Frame = -3
Query: 263 RRTKALLVERGTLTLPPVTEMTVMVPLIPLQRKVYMSILRKEXXXXXXXXXXXXXXXXXX 84
RRTKALL+E G L LPP+TE+TVMVPL PLQ+K+Y+S+LRKE
Sbjct: 271 RRTKALLIESGILELPPLTELTVMVPLAPLQKKIYLSVLRKELQTLLSFTGGSSRHQSLQ 330
Query: 83 NIVMQLRKTCSHPYLFSGIEPEPYEEG 3
NIV+QLRK CSHPYLFSGIEPEPYEEG
Sbjct: 331 NIVVQLRKACSHPYLFSGIEPEPYEEG 357
>gb|AAS58478.1| SNF2P [Hordeum vulgare subsp. vulgare]
Length = 882
Score = 113 bits (282), Expect = 3e-23
Identities = 56/87 (64%), Positives = 64/87 (73%)
Frame = -3
Query: 263 RRTKALLVERGTLTLPPVTEMTVMVPLIPLQRKVYMSILRKEXXXXXXXXXXXXXXXXXX 84
RRTKALL+E G L LPP+TE+TVMVPL PLQ+K+Y+S+LRKE
Sbjct: 271 RRTKALLIESGILELPPLTELTVMVPLAPLQKKIYLSVLRKELQTLLSFTGGSSRHQSLQ 330
Query: 83 NIVMQLRKTCSHPYLFSGIEPEPYEEG 3
NIV+QLRK CSHPYLFSGIEPEPYEEG
Sbjct: 331 NIVVQLRKACSHPYLFSGIEPEPYEEG 357
>gb|ACJ64199.1| SNF2P [Triticum turgidum]
Length = 882
Score = 111 bits (278), Expect = 9e-23
Identities = 55/87 (63%), Positives = 64/87 (73%)
Frame = -3
Query: 263 RRTKALLVERGTLTLPPVTEMTVMVPLIPLQRKVYMSILRKEXXXXXXXXXXXXXXXXXX 84
RRTKALL+E G L LPP+TE+TVMVPL PLQ+K+Y+S+LRKE
Sbjct: 271 RRTKALLIESGILELPPLTELTVMVPLAPLQKKIYLSVLRKELQTLLSFTGGSSRHQSLQ 330
Query: 83 NIVMQLRKTCSHPYLFSGIEPEPYEEG 3
NIV+QL+K CSHPYLFSGIEPEPYEEG
Sbjct: 331 NIVVQLQKACSHPYLFSGIEPEPYEEG 357
>ref|XP_006347927.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
X2 [Solanum tuberosum]
Length = 864
Score = 109 bits (272), Expect = 4e-22
Identities = 55/87 (63%), Positives = 63/87 (72%)
Frame = -3
Query: 263 RRTKALLVERGTLTLPPVTEMTVMVPLIPLQRKVYMSILRKEXXXXXXXXXXXXXXXXXX 84
RRTK+ L+E GTL LPP+TE+TVM PL+ LQ+KVYMSILRKE
Sbjct: 268 RRTKSQLIELGTLVLPPLTEITVMAPLVALQKKVYMSILRKELTQLLALASGAPNTRSLQ 327
Query: 83 NIVMQLRKTCSHPYLFSGIEPEPYEEG 3
NIV+QLRK CSHPYLF+GIEPEPYEEG
Sbjct: 328 NIVIQLRKACSHPYLFAGIEPEPYEEG 354
>ref|XP_006347926.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
X1 [Solanum tuberosum]
Length = 873
Score = 109 bits (272), Expect = 4e-22
Identities = 55/87 (63%), Positives = 63/87 (72%)
Frame = -3
Query: 263 RRTKALLVERGTLTLPPVTEMTVMVPLIPLQRKVYMSILRKEXXXXXXXXXXXXXXXXXX 84
RRTK+ L+E GTL LPP+TE+TVM PL+ LQ+KVYMSILRKE
Sbjct: 268 RRTKSQLIELGTLVLPPLTEITVMAPLVALQKKVYMSILRKELTQLLALASGAPNTRSLQ 327
Query: 83 NIVMQLRKTCSHPYLFSGIEPEPYEEG 3
NIV+QLRK CSHPYLF+GIEPEPYEEG
Sbjct: 328 NIVIQLRKACSHPYLFAGIEPEPYEEG 354
>ref|XP_004229767.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 1-like [Solanum lycopersicum]
Length = 842
Score = 109 bits (272), Expect = 4e-22
Identities = 55/87 (63%), Positives = 63/87 (72%)
Frame = -3
Query: 263 RRTKALLVERGTLTLPPVTEMTVMVPLIPLQRKVYMSILRKEXXXXXXXXXXXXXXXXXX 84
RRTK+ L+E GTL LPP+TE+TVM PL+ LQ+KVYMSILRKE
Sbjct: 272 RRTKSQLIELGTLVLPPLTEITVMAPLVALQKKVYMSILRKELSQLLALASGAPNTRSLQ 331
Query: 83 NIVMQLRKTCSHPYLFSGIEPEPYEEG 3
NIV+QLRK CSHPYLF+GIEPEPYEEG
Sbjct: 332 NIVIQLRKACSHPYLFAGIEPEPYEEG 358
>ref|XP_003562238.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like
[Brachypodium distachyon]
Length = 893
Score = 109 bits (272), Expect = 4e-22
Identities = 54/87 (62%), Positives = 63/87 (72%)
Frame = -3
Query: 263 RRTKALLVERGTLTLPPVTEMTVMVPLIPLQRKVYMSILRKEXXXXXXXXXXXXXXXXXX 84
RRTKALL + G L LPP+TE+TVMVP+ PLQ+K+Y+S+LRKE
Sbjct: 281 RRTKALLTQSGILELPPLTELTVMVPMAPLQKKLYLSVLRKELQTLLSFSGGSSRHQSLQ 340
Query: 83 NIVMQLRKTCSHPYLFSGIEPEPYEEG 3
NIV+QLRK CSHPYLFSGIEPEPYEEG
Sbjct: 341 NIVIQLRKACSHPYLFSGIEPEPYEEG 367
>ref|XP_004986094.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
X2 [Setaria italica]
Length = 854
Score = 107 bits (267), Expect = 2e-21
Identities = 55/87 (63%), Positives = 62/87 (71%)
Frame = -3
Query: 263 RRTKALLVERGTLTLPPVTEMTVMVPLIPLQRKVYMSILRKEXXXXXXXXXXXXXXXXXX 84
RRTKALL+ERG L LP +TE+TVMVPL LQ+K+YMS+LRKE
Sbjct: 226 RRTKALLIERGILALPALTELTVMVPLTQLQKKLYMSVLRKELQTLLSITGGSSRHQSLQ 285
Query: 83 NIVMQLRKTCSHPYLFSGIEPEPYEEG 3
NIV+QLRK CSHPYLFSGIEPEPY EG
Sbjct: 286 NIVIQLRKACSHPYLFSGIEPEPYVEG 312
>ref|XP_004986093.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
X1 [Setaria italica]
Length = 899
Score = 107 bits (267), Expect = 2e-21
Identities = 55/87 (63%), Positives = 62/87 (71%)
Frame = -3
Query: 263 RRTKALLVERGTLTLPPVTEMTVMVPLIPLQRKVYMSILRKEXXXXXXXXXXXXXXXXXX 84
RRTKALL+ERG L LP +TE+TVMVPL LQ+K+YMS+LRKE
Sbjct: 271 RRTKALLIERGILALPALTELTVMVPLTQLQKKLYMSVLRKELQTLLSITGGSSRHQSLQ 330
Query: 83 NIVMQLRKTCSHPYLFSGIEPEPYEEG 3
NIV+QLRK CSHPYLFSGIEPEPY EG
Sbjct: 331 NIVIQLRKACSHPYLFSGIEPEPYVEG 357
>ref|XP_006397678.1| hypothetical protein EUTSA_v10001305mg [Eutrema salsugineum]
gi|557098751|gb|ESQ39131.1| hypothetical protein
EUTSA_v10001305mg [Eutrema salsugineum]
Length = 880
Score = 107 bits (266), Expect = 2e-21
Identities = 53/87 (60%), Positives = 62/87 (71%)
Frame = -3
Query: 263 RRTKALLVERGTLTLPPVTEMTVMVPLIPLQRKVYMSILRKEXXXXXXXXXXXXXXXXXX 84
RRTK+LL+E G L LPP+TE+TVMVPL+ LQ+K+Y SILRKE
Sbjct: 286 RRTKSLLIESGNLVLPPLTELTVMVPLVSLQKKIYTSILRKELPGLLALSSGSSTHTSLQ 345
Query: 83 NIVMQLRKTCSHPYLFSGIEPEPYEEG 3
NIV+QLRK CSHPYLF GIEPEP+EEG
Sbjct: 346 NIVIQLRKACSHPYLFPGIEPEPFEEG 372
>ref|NP_182025.2| SNF2 and helicase domain-containing protein [Arabidopsis thaliana]
gi|330255398|gb|AEC10492.1| SNF2 and helicase
domain-containing protein [Arabidopsis thaliana]
Length = 851
Score = 107 bits (266), Expect = 2e-21
Identities = 53/87 (60%), Positives = 62/87 (71%)
Frame = -3
Query: 263 RRTKALLVERGTLTLPPVTEMTVMVPLIPLQRKVYMSILRKEXXXXXXXXXXXXXXXXXX 84
RRTK+LL+E G L LPP+TE+TVMVPL+ LQ+K+Y SILRKE
Sbjct: 274 RRTKSLLIESGNLVLPPLTELTVMVPLVSLQKKIYTSILRKELPGLLELSSGGSNHTSLQ 333
Query: 83 NIVMQLRKTCSHPYLFSGIEPEPYEEG 3
NIV+QLRK CSHPYLF GIEPEP+EEG
Sbjct: 334 NIVIQLRKACSHPYLFPGIEPEPFEEG 360
>ref|XP_002881993.1| hypothetical protein ARALYDRAFT_483627 [Arabidopsis lyrata subsp.
lyrata] gi|297327832|gb|EFH58252.1| hypothetical protein
ARALYDRAFT_483627 [Arabidopsis lyrata subsp. lyrata]
Length = 873
Score = 107 bits (266), Expect = 2e-21
Identities = 53/87 (60%), Positives = 62/87 (71%)
Frame = -3
Query: 263 RRTKALLVERGTLTLPPVTEMTVMVPLIPLQRKVYMSILRKEXXXXXXXXXXXXXXXXXX 84
RRTK+LL+E G L LPP+TE+TVMVPL+ LQ+K+Y SILRKE
Sbjct: 279 RRTKSLLIESGNLVLPPLTELTVMVPLVSLQKKIYTSILRKELPGLLALSSGGSNHTSLQ 338
Query: 83 NIVMQLRKTCSHPYLFSGIEPEPYEEG 3
NIV+QLRK CSHPYLF GIEPEP+EEG
Sbjct: 339 NIVIQLRKACSHPYLFPGIEPEPFEEG 365
>ref|NP_973689.2| SNF2 and helicase domain-containing protein [Arabidopsis thaliana]
gi|330255399|gb|AEC10493.1| SNF2 and helicase
domain-containing protein [Arabidopsis thaliana]
Length = 877
Score = 107 bits (266), Expect = 2e-21
Identities = 53/87 (60%), Positives = 62/87 (71%)
Frame = -3
Query: 263 RRTKALLVERGTLTLPPVTEMTVMVPLIPLQRKVYMSILRKEXXXXXXXXXXXXXXXXXX 84
RRTK+LL+E G L LPP+TE+TVMVPL+ LQ+K+Y SILRKE
Sbjct: 283 RRTKSLLIESGNLVLPPLTELTVMVPLVSLQKKIYTSILRKELPGLLELSSGGSNHTSLQ 342
Query: 83 NIVMQLRKTCSHPYLFSGIEPEPYEEG 3
NIV+QLRK CSHPYLF GIEPEP+EEG
Sbjct: 343 NIVIQLRKACSHPYLFPGIEPEPFEEG 369
>ref|XP_004166129.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 1-like [Cucumis sativus]
Length = 867
Score = 106 bits (265), Expect = 3e-21
Identities = 56/87 (64%), Positives = 60/87 (68%)
Frame = -3
Query: 263 RRTKALLVERGTLTLPPVTEMTVMVPLIPLQRKVYMSILRKEXXXXXXXXXXXXXXXXXX 84
RRTKA L E G L LPP+TE TVMVPL+ LQRKVYMS+LRKE
Sbjct: 269 RRTKAKLSESGVLLLPPLTETTVMVPLVNLQRKVYMSLLRKELPKLLAVSAGSSNHQSLQ 328
Query: 83 NIVMQLRKTCSHPYLFSGIEPEPYEEG 3
NIV+QLRK CSHPYLF GIEPEPYEEG
Sbjct: 329 NIVIQLRKACSHPYLFPGIEPEPYEEG 355
>ref|XP_004140512.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like
[Cucumis sativus]
Length = 868
Score = 106 bits (265), Expect = 3e-21
Identities = 56/87 (64%), Positives = 60/87 (68%)
Frame = -3
Query: 263 RRTKALLVERGTLTLPPVTEMTVMVPLIPLQRKVYMSILRKEXXXXXXXXXXXXXXXXXX 84
RRTKA L E G L LPP+TE TVMVPL+ LQRKVYMS+LRKE
Sbjct: 269 RRTKAKLSESGVLLLPPLTETTVMVPLVNLQRKVYMSLLRKELPKLLAVSAGSSNHQSLQ 328
Query: 83 NIVMQLRKTCSHPYLFSGIEPEPYEEG 3
NIV+QLRK CSHPYLF GIEPEPYEEG
Sbjct: 329 NIVIQLRKACSHPYLFPGIEPEPYEEG 355
>gb|EXB89101.1| Chromodomain-helicase-DNA-binding protein 1-like protein [Morus
notabilis]
Length = 827
Score = 106 bits (264), Expect = 4e-21
Identities = 53/87 (60%), Positives = 62/87 (71%)
Frame = -3
Query: 263 RRTKALLVERGTLTLPPVTEMTVMVPLIPLQRKVYMSILRKEXXXXXXXXXXXXXXXXXX 84
RRTK+ L++ G L LPP+TE+T+MVPL+ LQ+KVYMSILRKE
Sbjct: 242 RRTKSRLIQHGNLILPPLTEITMMVPLVSLQKKVYMSILRKELPKLLAFSSAASNHQSLQ 301
Query: 83 NIVMQLRKTCSHPYLFSGIEPEPYEEG 3
NIV+QLRK CSHPYLF GIEPEPYEEG
Sbjct: 302 NIVIQLRKACSHPYLFPGIEPEPYEEG 328
>ref|XP_006650946.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Oryza
brachyantha]
Length = 864
Score = 105 bits (263), Expect = 5e-21
Identities = 53/87 (60%), Positives = 62/87 (71%)
Frame = -3
Query: 263 RRTKALLVERGTLTLPPVTEMTVMVPLIPLQRKVYMSILRKEXXXXXXXXXXXXXXXXXX 84
RRTKALL++ G L LP +TE+TVMVPL PLQ+K+Y+S+LRKE
Sbjct: 249 RRTKALLIQSGILALPSLTELTVMVPLTPLQKKLYLSVLRKELQTLLTFTGGSSRHQSLQ 308
Query: 83 NIVMQLRKTCSHPYLFSGIEPEPYEEG 3
NIV+QLRK CSHPYLFSGIEPEPY EG
Sbjct: 309 NIVIQLRKACSHPYLFSGIEPEPYVEG 335
>gb|AFW89901.1| hypothetical protein ZEAMMB73_126422, partial [Zea mays]
Length = 818
Score = 105 bits (263), Expect = 5e-21
Identities = 54/87 (62%), Positives = 61/87 (70%)
Frame = -3
Query: 263 RRTKALLVERGTLTLPPVTEMTVMVPLIPLQRKVYMSILRKEXXXXXXXXXXXXXXXXXX 84
RRTK LL+E G L LPP+TE+TVMVPL LQ+K+YMS+LRKE
Sbjct: 208 RRTKFLLIESGILALPPLTELTVMVPLTQLQKKLYMSVLRKELPTLISFARGSSRHQSLQ 267
Query: 83 NIVMQLRKTCSHPYLFSGIEPEPYEEG 3
NIV+QLRK CSHPYLFSGIEPEPY EG
Sbjct: 268 NIVIQLRKVCSHPYLFSGIEPEPYVEG 294