BLASTX nr result
ID: Zingiber23_contig00049637
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00049637
(250 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI28351.3| unnamed protein product [Vitis vinifera] 62 1e-07
ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containi... 62 1e-07
gb|EOY33477.1| Tetratricopeptide repeat (TPR)-like superfamily p... 61 1e-07
gb|EPS73842.1| hypothetical protein M569_00905 [Genlisea aurea] 60 4e-07
gb|EOY11208.1| Pentatricopeptide repeat (PPR) superfamily protei... 59 5e-07
gb|EOY11207.1| Pentatricopeptide repeat superfamily protein isof... 59 5e-07
ref|XP_006349117.1| PREDICTED: pentatricopeptide repeat-containi... 59 9e-07
gb|EMT16538.1| hypothetical protein F775_08209 [Aegilops tauschii] 59 9e-07
ref|XP_004251045.1| PREDICTED: pentatricopeptide repeat-containi... 59 9e-07
ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containi... 59 9e-07
gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indi... 59 9e-07
ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group] g... 59 9e-07
gb|EMJ08364.1| hypothetical protein PRUPE_ppa023637mg [Prunus pe... 58 1e-06
ref|NP_193101.2| pentatricopeptide repeat-containing protein [Ar... 58 1e-06
emb|CAB36829.1| putative protein [Arabidopsis thaliana] gi|72680... 58 1e-06
ref|XP_006410248.1| hypothetical protein EUTSA_v10016243mg [Eutr... 57 3e-06
ref|XP_004961923.1| PREDICTED: pentatricopeptide repeat-containi... 57 3e-06
ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [S... 57 3e-06
ref|XP_006409754.1| hypothetical protein EUTSA_v10017649mg [Eutr... 56 4e-06
ref|XP_004291465.1| PREDICTED: pentatricopeptide repeat-containi... 56 4e-06
>emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 61.6 bits (148), Expect = 1e-07
Identities = 36/73 (49%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Frame = +1
Query: 1 RTLISFCIVHGHVKLGLASIAKMILLGQMDSSAFVLLSNLYAIEKKWHARTKVRDAMEVD 180
RTL++ C VH +V+LG + K+I L DS+A+VLLSN+YA W R KVR M D
Sbjct: 571 RTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLM--D 628
Query: 181 IKNAKKVA-VSWI 216
+K KK A SWI
Sbjct: 629 MKKVKKEAGYSWI 641
>ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 61.6 bits (148), Expect = 1e-07
Identities = 36/73 (49%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Frame = +1
Query: 1 RTLISFCIVHGHVKLGLASIAKMILLGQMDSSAFVLLSNLYAIEKKWHARTKVRDAMEVD 180
RTL++ C VH +V+LG + K+I L DS+A+VLLSN+YA W R KVR M D
Sbjct: 667 RTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLM--D 724
Query: 181 IKNAKKVA-VSWI 216
+K KK A SWI
Sbjct: 725 MKKVKKEAGYSWI 737
>gb|EOY33477.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao]
Length = 875
Score = 61.2 bits (147), Expect = 1e-07
Identities = 34/72 (47%), Positives = 45/72 (62%)
Frame = +1
Query: 1 RTLISFCIVHGHVKLGLASIAKMILLGQMDSSAFVLLSNLYAIEKKWHARTKVRDAMEVD 180
RTL+S C VH +++LG + ++I L DS+A+VLLSN+YA W RTKVR ME
Sbjct: 676 RTLLSACRVHHNLELGKLAAEQLISLQPQDSAAYVLLSNIYAATGNWQERTKVRKLME-K 734
Query: 181 IKNAKKVAVSWI 216
K K+ SWI
Sbjct: 735 RKVRKEPGYSWI 746
>gb|EPS73842.1| hypothetical protein M569_00905 [Genlisea aurea]
Length = 826
Score = 59.7 bits (143), Expect = 4e-07
Identities = 34/73 (46%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Frame = +1
Query: 1 RTLISFCIVHGHVKLGLASIAKMILLGQMDSSAFVLLSNLYAIEKKWHARTKVRDAM-EV 177
RTL++ C VHGH++LG + K+I DSSA+VLL+NL A W R +VR M E
Sbjct: 627 RTLLAACRVHGHLELGKIAAEKLISFQPQDSSAYVLLANLCAAAGNWMGRAQVRKMMDEK 686
Query: 178 DIKNAKKVAVSWI 216
+IK K+ SWI
Sbjct: 687 EIK--KETGFSWI 697
>gb|EOY11208.1| Pentatricopeptide repeat (PPR) superfamily protein isoform 2
[Theobroma cacao]
Length = 1072
Score = 59.3 bits (142), Expect = 5e-07
Identities = 33/73 (45%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = +1
Query: 1 RTLISFCIVHGHVKLGLASIAKMILLGQMDSSAFVLLSNLYAIEKKWHARTKVRDAM-EV 177
RTL+S C VH +V +G + ++ L DS+++VLLSNLYA+ KKW +R + R M E
Sbjct: 873 RTLLSACAVHKNVDIGEFAAHHLLKLEPQDSASYVLLSNLYAVSKKWDSRDQTRQMMKER 932
Query: 178 DIKNAKKVAVSWI 216
+K K+ A SWI
Sbjct: 933 GVK--KEPAQSWI 943
>gb|EOY11207.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
cacao]
Length = 1389
Score = 59.3 bits (142), Expect = 5e-07
Identities = 33/73 (45%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = +1
Query: 1 RTLISFCIVHGHVKLGLASIAKMILLGQMDSSAFVLLSNLYAIEKKWHARTKVRDAM-EV 177
RTL+S C VH +V +G + ++ L DS+++VLLSNLYA+ KKW +R + R M E
Sbjct: 873 RTLLSACAVHKNVDIGEFAAHHLLKLEPQDSASYVLLSNLYAVSKKWDSRDQTRQMMKER 932
Query: 178 DIKNAKKVAVSWI 216
+K K+ A SWI
Sbjct: 933 GVK--KEPAQSWI 943
>ref|XP_006349117.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Solanum tuberosum]
Length = 871
Score = 58.5 bits (140), Expect = 9e-07
Identities = 33/72 (45%), Positives = 44/72 (61%)
Frame = +1
Query: 1 RTLISFCIVHGHVKLGLASIAKMILLGQMDSSAFVLLSNLYAIEKKWHARTKVRDAMEVD 180
RTL++ VH +V+LG + +I L DS+A+VLLSNLYA W R KVR M+V
Sbjct: 672 RTLLAASRVHRNVELGKLAAENLISLQPQDSAAYVLLSNLYAATGDWQERAKVRKLMDVR 731
Query: 181 IKNAKKVAVSWI 216
K K++ SWI
Sbjct: 732 -KVKKEIGYSWI 742
>gb|EMT16538.1| hypothetical protein F775_08209 [Aegilops tauschii]
Length = 773
Score = 58.5 bits (140), Expect = 9e-07
Identities = 34/73 (46%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Frame = +1
Query: 1 RTLISFCIVHGHVKLGLASIAKMILLGQMDSSAFVLLSNLYAIEKKWHARTKVRDAMEVD 180
RTL+ C VH +V+LG + K++ L +DS+ +VLLSN+YA KW R +VR M D
Sbjct: 490 RTLLGACRVHKNVELGKLAAEKLLSLEPLDSATYVLLSNIYASAGKWKERDEVRKLM--D 547
Query: 181 IKNAKKVA-VSWI 216
K KK A SWI
Sbjct: 548 SKKVKKEAGSSWI 560
>ref|XP_004251045.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Solanum lycopersicum]
Length = 871
Score = 58.5 bits (140), Expect = 9e-07
Identities = 33/72 (45%), Positives = 44/72 (61%)
Frame = +1
Query: 1 RTLISFCIVHGHVKLGLASIAKMILLGQMDSSAFVLLSNLYAIEKKWHARTKVRDAMEVD 180
RTL++ VH +V+LG + +I L DS+A+VLLSNLYA W R KVR M+V
Sbjct: 672 RTLLAASRVHRNVELGKLAAENLISLQPQDSAAYVLLSNLYAATGDWQERAKVRKLMDVR 731
Query: 181 IKNAKKVAVSWI 216
K K++ SWI
Sbjct: 732 -KVKKEIGYSWI 742
>ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 874
Score = 58.5 bits (140), Expect = 9e-07
Identities = 34/73 (46%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Frame = +1
Query: 1 RTLISFCIVHGHVKLGLASIAKMILLGQMDSSAFVLLSNLYAIEKKWHARTKVRDAMEVD 180
RTL+ C VH +V+LG + K++LL DS+ +VLLSN+YA +W R +VR M D
Sbjct: 675 RTLLGACRVHKNVELGKLAAQKLLLLEPDDSATYVLLSNIYAAAGRWKERDEVRKLM--D 732
Query: 181 IKNAKKVA-VSWI 216
K KK A SWI
Sbjct: 733 SKKVKKEAGCSWI 745
>gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
Length = 874
Score = 58.5 bits (140), Expect = 9e-07
Identities = 33/72 (45%), Positives = 43/72 (59%)
Frame = +1
Query: 1 RTLISFCIVHGHVKLGLASIAKMILLGQMDSSAFVLLSNLYAIEKKWHARTKVRDAMEVD 180
RTL+ C VH +V+LG S K++ L DSS +VLLSN+YA KW R +VR M+
Sbjct: 675 RTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYR 734
Query: 181 IKNAKKVAVSWI 216
K K+ SWI
Sbjct: 735 -KVKKEAGCSWI 745
>ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa
Japonica Group] gi|113579278|dbj|BAF17641.1|
Os05g0455900 [Oryza sativa Japonica Group]
gi|222631826|gb|EEE63958.1| hypothetical protein
OsJ_18783 [Oryza sativa Japonica Group]
Length = 874
Score = 58.5 bits (140), Expect = 9e-07
Identities = 33/72 (45%), Positives = 43/72 (59%)
Frame = +1
Query: 1 RTLISFCIVHGHVKLGLASIAKMILLGQMDSSAFVLLSNLYAIEKKWHARTKVRDAMEVD 180
RTL+ C VH +V+LG S K++ L DSS +VLLSN+YA KW R +VR M+
Sbjct: 675 RTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYR 734
Query: 181 IKNAKKVAVSWI 216
K K+ SWI
Sbjct: 735 -KVKKEAGCSWI 745
>gb|EMJ08364.1| hypothetical protein PRUPE_ppa023637mg [Prunus persica]
Length = 731
Score = 58.2 bits (139), Expect = 1e-06
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +1
Query: 1 RTLISFCIVHGHVKLGLASIAKMILLGQMDSSAFVLLSNLYAIEKKWHARTKVRDAMEVD 180
R L+ C +H +++LG + K+I L DS+A+VLLSN+YA W R KVR M D
Sbjct: 532 RALLGACRIHRNIELGKLAAEKLIALQPQDSAAYVLLSNIYATAGNWQERAKVRKLM--D 589
Query: 181 IKNAKK-VAVSWI 216
+N KK SWI
Sbjct: 590 ERNVKKQPGYSWI 602
>ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g13650 gi|332657909|gb|AEE83309.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 57.8 bits (138), Expect = 1e-06
Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Frame = +1
Query: 1 RTLISFCIVHGHVKLGLASIAKMILLGQMDSSAFVLLSNLYAIEKKWHARTKVRDAM-EV 177
RTL+S C+VH ++++G + ++ L DS+ +VLLSNLYA+ KKW AR R M E
Sbjct: 865 RTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEK 924
Query: 178 DIKNAKKVAVSWI 216
+K K+ SWI
Sbjct: 925 GVK--KEPGQSWI 935
>emb|CAB36829.1| putative protein [Arabidopsis thaliana] gi|7268069|emb|CAB78407.1|
putative protein [Arabidopsis thaliana]
Length = 1024
Score = 57.8 bits (138), Expect = 1e-06
Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Frame = +1
Query: 1 RTLISFCIVHGHVKLGLASIAKMILLGQMDSSAFVLLSNLYAIEKKWHARTKVRDAM-EV 177
RTL+S C+VH ++++G + ++ L DS+ +VLLSNLYA+ KKW AR R M E
Sbjct: 825 RTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEK 884
Query: 178 DIKNAKKVAVSWI 216
+K K+ SWI
Sbjct: 885 GVK--KEPGQSWI 895
>ref|XP_006410248.1| hypothetical protein EUTSA_v10016243mg [Eutrema salsugineum]
gi|557111417|gb|ESQ51701.1| hypothetical protein
EUTSA_v10016243mg [Eutrema salsugineum]
Length = 844
Score = 57.0 bits (136), Expect = 3e-06
Identities = 31/73 (42%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = +1
Query: 1 RTLISFCIVHGHVKLGLASIAKMILLGQMDSSAFVLLSNLYAIEKKWHARTKVRDAM-EV 177
RTL+S C+VH ++++G + ++ L DS+ +VLLSNLYA+ +KW AR + R M E
Sbjct: 645 RTLLSACVVHKNLEIGEFAARHLVELEPEDSATYVLLSNLYAVCRKWDARDQTRQKMKEK 704
Query: 178 DIKNAKKVAVSWI 216
+K K+ SWI
Sbjct: 705 GVK--KEPGQSWI 715
>ref|XP_004961923.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Setaria italica]
Length = 872
Score = 56.6 bits (135), Expect = 3e-06
Identities = 29/72 (40%), Positives = 44/72 (61%)
Frame = +1
Query: 1 RTLISFCIVHGHVKLGLASIAKMILLGQMDSSAFVLLSNLYAIEKKWHARTKVRDAMEVD 180
RTL+ C VH +V+LG + K++ L +DS+ +VLLSN+Y+ KW + +VR M+
Sbjct: 673 RTLLGACRVHKNVELGKLAAEKLLSLEPLDSATYVLLSNIYSAAGKWKEKDEVRKLMDTR 732
Query: 181 IKNAKKVAVSWI 216
K K+ SWI
Sbjct: 733 -KVKKEAGCSWI 743
>ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein
SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 56.6 bits (135), Expect = 3e-06
Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Frame = +1
Query: 1 RTLISFCIVHGHVKLGLASIAKMILLGQMDSSAFVLLSNLYAIEKKWHARTKVRDAMEVD 180
RTL+ C VH +V+LG + K++ L DS+ +VLLSN+Y+ KW + +VR M D
Sbjct: 679 RTLLGACKVHKNVELGKLAAEKLLSLEPFDSATYVLLSNIYSAAGKWKEKDEVRKLM--D 736
Query: 181 IKNAKKVA-VSWI 216
K KK A SWI
Sbjct: 737 TKKVKKEAGCSWI 749
>ref|XP_006409754.1| hypothetical protein EUTSA_v10017649mg [Eutrema salsugineum]
gi|557110923|gb|ESQ51207.1| hypothetical protein
EUTSA_v10017649mg [Eutrema salsugineum]
Length = 861
Score = 56.2 bits (134), Expect = 4e-06
Identities = 33/73 (45%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Frame = +1
Query: 1 RTLISFCIVHGHVKLGLASIAKMILLGQMDSSAFVLLSNLYAIEKKWHARTKVRDAMEVD 180
RT+++ C VH +LG + K+I + DS+A+VLLSN+YA W R KVR M D
Sbjct: 661 RTILAACRVHKKTELGRLAAEKIIEMKPEDSAAYVLLSNMYAESGDWQKRAKVRKLM--D 718
Query: 181 IKNAKKVA-VSWI 216
+N KK A SWI
Sbjct: 719 ERNVKKEAGYSWI 731
>ref|XP_004291465.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Fragaria vesca subsp. vesca]
Length = 588
Score = 56.2 bits (134), Expect = 4e-06
Identities = 31/67 (46%), Positives = 40/67 (59%)
Frame = +1
Query: 1 RTLISFCIVHGHVKLGLASIAKMILLGQMDSSAFVLLSNLYAIEKKWHARTKVRDAMEVD 180
RTLIS C HG +KLG + ++I M S +VLLSN+YA W +TK R+AM D
Sbjct: 389 RTLISACRAHGELKLGESITKELIRAEPMHESNYVLLSNIYAKMNHWEKKTKTREAM--D 446
Query: 181 IKNAKKV 201
K KK+
Sbjct: 447 KKGMKKI 453