BLASTX nr result

ID: Zingiber23_contig00049552 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00049552
         (337 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006444438.1| hypothetical protein CICLE_v10018574mg [Citr...    59   7e-07
gb|ADQ28096.1| celullose synthase-like D protein [Gossypium hirs...    59   9e-07
ref|XP_003575482.1| PREDICTED: cellulose synthase-like protein D...    58   1e-06
dbj|BAK06393.1| predicted protein [Hordeum vulgare subsp. vulgare]     58   1e-06
ref|XP_002523143.1| Cellulose synthase A catalytic subunit 3 [UD...    57   3e-06
gb|EOX95192.1| Cellulose synthase-like D5 [Theobroma cacao]            55   1e-05

>ref|XP_006444438.1| hypothetical protein CICLE_v10018574mg [Citrus clementina]
           gi|568852740|ref|XP_006480029.1| PREDICTED: cellulose
           synthase-like protein D5-like [Citrus sinensis]
           gi|557546700|gb|ESR57678.1| hypothetical protein
           CICLE_v10018574mg [Citrus clementina]
          Length = 1165

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 39/83 (46%), Positives = 46/83 (55%)
 Frame = +1

Query: 88  PVTITVSSSGGKEGGDGPLRRSIGLTSPVPRHSFSKADXXXXXXXXXXXXXXXXXYFSAA 267
           PVTITVSS GGK GG     RS+GLTSPVPR SFS                     +  +
Sbjct: 12  PVTITVSS-GGKGGGS----RSMGLTSPVPRASFSNNPNSPLSGRAHRARSSSGGRY-VS 65

Query: 268 DNNDESHERTSSDFVRYTVHIPP 336
            + D++ E  SS+FV YTVHIPP
Sbjct: 66  MSKDDATEEISSEFVTYTVHIPP 88


>gb|ADQ28096.1| celullose synthase-like D protein [Gossypium hirsutum]
          Length = 1175

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 39/85 (45%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
 Frame = +1

Query: 88  PVTITVSSSGGKEGGDGPLRRSIGLTSPVPRHSFSK--ADXXXXXXXXXXXXXXXXXYFS 261
           PVTITVSSSGGKE G     RS+GLTSPVPR S S                      Y S
Sbjct: 13  PVTITVSSSGGKETGS----RSMGLTSPVPRASKSNNPNSPSPLGSRGNRRASSGGRYCS 68

Query: 262 AADNNDESHERTSSDFVRYTVHIPP 336
            + ++    E  +S+FV YTVHIPP
Sbjct: 69  MSQDDPIPIEEINSEFVTYTVHIPP 93


>ref|XP_003575482.1| PREDICTED: cellulose synthase-like protein D4-like [Brachypodium
           distachyon]
          Length = 1211

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 34/85 (40%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
 Frame = +1

Query: 88  PVTITVSSS--GGKEGGDGPLRRSIGLTSPVPRHSFSKADXXXXXXXXXXXXXXXXXYFS 261
           PVT+T+S    GG   GDG +RR   LTSPVPRHS   +                  Y  
Sbjct: 12  PVTVTLSPGRGGGGSPGDGVVRRGSALTSPVPRHSIGSSSSTATLQVSPVRRSGGSRYLG 71

Query: 262 AADNNDESHERTSSDFVRYTVHIPP 336
           A+ + D      S++FV YTVHIPP
Sbjct: 72  ASRDAD-----ASAEFVHYTVHIPP 91


>dbj|BAK06393.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1208

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 36/88 (40%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
 Frame = +1

Query: 88  PVTITVSSSGGKEGG-----DGPLRRSIGLTSPVPRHSFSKADXXXXXXXXXXXXXXXXX 252
           PVT+TVS + GK GG     DG +RR  GLTSPVPRHS   +                  
Sbjct: 12  PVTVTVSPTRGKAGGGGSPGDGVVRRGSGLTSPVPRHSIGSSTATLQVSPVRRSGGSRYA 71

Query: 253 YFSAADNNDESHERTSSDFVRYTVHIPP 336
               AD         S++FV+YTVHIPP
Sbjct: 72  SRDGAD--------ASAEFVQYTVHIPP 91


>ref|XP_002523143.1| Cellulose synthase A catalytic subunit 3 [UDP-forming], putative
           [Ricinus communis] gi|223537705|gb|EEF39328.1| Cellulose
           synthase A catalytic subunit 3 [UDP-forming], putative
           [Ricinus communis]
          Length = 1162

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 40/83 (48%), Positives = 46/83 (55%)
 Frame = +1

Query: 88  PVTITVSSSGGKEGGDGPLRRSIGLTSPVPRHSFSKADXXXXXXXXXXXXXXXXXYFSAA 267
           PVTITVSS GGKE G     RS+GLTSPVPR S S  +                 Y S +
Sbjct: 12  PVTITVSS-GGKERGS----RSMGLTSPVPRASISN-NPNSPLTNSKNRTSSGGRYCSMS 65

Query: 268 DNNDESHERTSSDFVRYTVHIPP 336
              D++ E  +SDFV YTVHIPP
Sbjct: 66  --RDDTTEEINSDFVTYTVHIPP 86


>gb|EOX95192.1| Cellulose synthase-like D5 [Theobroma cacao]
          Length = 1170

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 37/83 (44%), Positives = 43/83 (51%)
 Frame = +1

Query: 88  PVTITVSSSGGKEGGDGPLRRSIGLTSPVPRHSFSKADXXXXXXXXXXXXXXXXXYFSAA 267
           PVTITVSS GGKE G     RS+GLTSPVPR S +                        +
Sbjct: 12  PVTITVSS-GGKETGS----RSMGLTSPVPRASIANNPNSPSPLGSRGNRRASSGGRYCS 66

Query: 268 DNNDESHERTSSDFVRYTVHIPP 336
            + DE  E  +S+FV YTVHIPP
Sbjct: 67  MSKDEPIEEINSEFVSYTVHIPP 89


Top