BLASTX nr result
ID: Zingiber23_contig00048772
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00048772
(278 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002267837.1| PREDICTED: PHD finger protein At1g33420 [Vit... 44 4e-09
ref|XP_004165011.1| PREDICTED: PHD finger protein At1g33420-like... 44 1e-07
ref|XP_004144350.1| PREDICTED: PHD finger protein At1g33420-like... 44 1e-07
gb|EXB64073.1| PHD finger protein [Morus notabilis] 44 3e-07
ref|XP_006360454.1| PREDICTED: PHD finger protein At1g33420-like... 39 7e-07
ref|XP_004236973.1| PREDICTED: PHD finger protein At1g33420-like... 40 1e-06
ref|XP_002518819.1| DNA binding protein, putative [Ricinus commu... 41 4e-06
gb|EXC32483.1| PHD finger protein [Morus notabilis] 39 1e-05
>ref|XP_002267837.1| PREDICTED: PHD finger protein At1g33420 [Vitis vinifera]
gi|296084820|emb|CBI27702.3| unnamed protein product
[Vitis vinifera]
Length = 692
Score = 43.9 bits (102), Expect(2) = 4e-09
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +3
Query: 9 GALCAWPREQVDLAKATVRKFLQAVVGPRWVAWRALR 119
G LCAW R ++ + + + L+AV G WV+WRALR
Sbjct: 348 GILCAWTRNDIERVEEAMFRVLRAVTGSNWVSWRALR 384
Score = 42.4 bits (98), Expect(2) = 4e-09
Identities = 20/39 (51%), Positives = 24/39 (61%)
Frame = +1
Query: 136 IVPPELLDYCLKATIGKHVGDELVVVALYNPESKTIEYR 252
+ PPELLDYCLK GK +VV NP+S +EYR
Sbjct: 390 VAPPELLDYCLKELGGKLTSYGVVVQVRCNPDSGAVEYR 428
>ref|XP_004165011.1| PREDICTED: PHD finger protein At1g33420-like [Cucumis sativus]
Length = 668
Score = 43.9 bits (102), Expect(2) = 1e-07
Identities = 22/37 (59%), Positives = 24/37 (64%)
Frame = +1
Query: 142 PPELLDYCLKATIGKHVGDELVVVALYNPESKTIEYR 252
PPELLDYCLK GK D +VV A NP+S EYR
Sbjct: 367 PPELLDYCLKNLGGKVSSDGMVVNAQRNPQSGAFEYR 403
Score = 37.4 bits (85), Expect(2) = 1e-07
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 15 LCAWPREQVDLAKATVRKFLQAVVGPRWVAWRALR 119
LC+W + V + + K L AV G WV WR LR
Sbjct: 325 LCSWTKSDVTRVEEAMLKVLHAVSGSNWVTWRTLR 359
>ref|XP_004144350.1| PREDICTED: PHD finger protein At1g33420-like [Cucumis sativus]
Length = 668
Score = 43.9 bits (102), Expect(2) = 1e-07
Identities = 22/37 (59%), Positives = 24/37 (64%)
Frame = +1
Query: 142 PPELLDYCLKATIGKHVGDELVVVALYNPESKTIEYR 252
PPELLDYCLK GK D +VV A NP+S EYR
Sbjct: 367 PPELLDYCLKNLGGKVSSDGMVVNAQRNPQSGAFEYR 403
Score = 37.4 bits (85), Expect(2) = 1e-07
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 15 LCAWPREQVDLAKATVRKFLQAVVGPRWVAWRALR 119
LC+W + V + + K L AV G WV WR LR
Sbjct: 325 LCSWTKSDVTRVEEAMLKVLHAVSGSNWVTWRTLR 359
>gb|EXB64073.1| PHD finger protein [Morus notabilis]
Length = 645
Score = 44.3 bits (103), Expect(2) = 3e-07
Identities = 24/45 (53%), Positives = 29/45 (64%)
Frame = +1
Query: 142 PPELLDYCLKATIGKHVGDELVVVALYNPESKTIEYR*LEINFVA 276
PPELLDYCLK GK D +VV A NP++ EYR LE+ V+
Sbjct: 330 PPELLDYCLKELGGKTTVDGMVVSARLNPDTGAFEYR-LELGRVS 373
Score = 35.4 bits (80), Expect(2) = 3e-07
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 24 WPREQVDLAKATVRKFLQAVVGPRWVAWRALR 119
W R +D + + + L+AV G WV+WRAL+
Sbjct: 291 WTRNDIDRVEEAMLRVLRAVSGANWVSWRALK 322
>ref|XP_006360454.1| PREDICTED: PHD finger protein At1g33420-like [Solanum tuberosum]
Length = 705
Score = 39.3 bits (90), Expect(2) = 7e-07
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +3
Query: 15 LCAWPREQVDLAKATVRKFLQAVVGPRWVAWRALR 119
LCAW + + + + L+AV GP WV+WRALR
Sbjct: 355 LCAWTSTDILRVEEAMFRVLRAVSGPNWVSWRALR 389
Score = 39.3 bits (90), Expect(2) = 7e-07
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +1
Query: 142 PPELLDYCLKATIGKHVGDELVVVALYNPESKTIEYR 252
PPELLDYCLKA GK D LVV + S +EY+
Sbjct: 397 PPELLDYCLKALHGKQAADGLVVNSRSVSGSGAMEYK 433
>ref|XP_004236973.1| PREDICTED: PHD finger protein At1g33420-like [Solanum lycopersicum]
Length = 703
Score = 39.7 bits (91), Expect(2) = 1e-06
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +1
Query: 142 PPELLDYCLKATIGKHVGDELVVVALYNPESKTIEYR 252
PPELLDYCLKA GK V D +VV S +EY+
Sbjct: 395 PPELLDYCLKALHGKQVADGMVVNVRSVSGSGAMEYK 431
Score = 38.1 bits (87), Expect(2) = 1e-06
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +3
Query: 15 LCAWPREQVDLAKATVRKFLQAVVGPRWVAWRALR 119
LC+W + + + + L+AV GP WV+WRALR
Sbjct: 353 LCSWTSTDILRVEEAMFRVLRAVSGPNWVSWRALR 387
>ref|XP_002518819.1| DNA binding protein, putative [Ricinus communis]
gi|223542200|gb|EEF43744.1| DNA binding protein,
putative [Ricinus communis]
Length = 677
Score = 40.8 bits (94), Expect(2) = 4e-06
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +1
Query: 136 IVPPELLDYCLKATIGKHVGDELVVVALYNPESKTIEYR 252
+ PP LLD+CLK GK D ++V NP+S EYR
Sbjct: 388 VAPPNLLDHCLKELGGKAAADGMIVGTRCNPDSGAFEYR 426
Score = 35.4 bits (80), Expect(2) = 4e-06
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +3
Query: 9 GALCAWPREQVDLAKATVRKFLQAVVGPRWVAWRALR 119
G +WP+ V+ + + + L+AV WV+WRALR
Sbjct: 346 GVSSSWPKNDVERVEEAMLRVLKAVSESTWVSWRALR 382
>gb|EXC32483.1| PHD finger protein [Morus notabilis]
Length = 732
Score = 38.9 bits (89), Expect(2) = 1e-05
Identities = 20/36 (55%), Positives = 23/36 (63%)
Frame = +1
Query: 145 PELLDYCLKATIGKHVGDELVVVALYNPESKTIEYR 252
PELL+YCLK G D +VV + NP S TIEYR
Sbjct: 413 PELLEYCLKHFGGNVTHDGMVVHSHCNPTSSTIEYR 448
Score = 35.8 bits (81), Expect(2) = 1e-05
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 12 ALCAWPREQVDLAKATVRKFLQAVVGPRWVAWRALRQVM 128
ALCAW R V+ + + K L+A G WV RAL+ M
Sbjct: 369 ALCAWTRNDVECLQQAMIKILRASTGCGWVTRRALKGTM 407