BLASTX nr result
ID: Zingiber23_contig00047477
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00047477
(420 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putat... 196 2e-48
ref|XP_002297732.2| DNA-directed RNA polymerase family protein [... 192 3e-47
ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I sub... 187 9e-46
emb|CBI35100.3| unnamed protein product [Vitis vinifera] 187 9e-46
gb|EXC31692.1| putative DNA-directed RNA polymerase I subunit RP... 187 2e-45
ref|XP_004982736.1| PREDICTED: LOW QUALITY PROTEIN: probable DNA... 187 2e-45
tpg|DAA49470.1| TPA: hypothetical protein ZEAMMB73_824600 [Zea m... 184 8e-45
tpg|DAA49469.1| TPA: hypothetical protein ZEAMMB73_824600 [Zea m... 184 8e-45
gb|EOY19647.1| Nuclear RNA polymerase A2 isoform 2 [Theobroma ca... 184 1e-44
gb|EOY19646.1| DNA-directed RNA polymerase isoform 1 [Theobroma ... 184 1e-44
gb|EMJ26191.1| hypothetical protein PRUPE_ppa020507mg [Prunus pe... 180 2e-43
gb|EEE51207.1| hypothetical protein OsJ_32024 [Oryza sativa Japo... 180 2e-43
gb|EEC67242.1| hypothetical protein OsI_34174 [Oryza sativa Indi... 180 2e-43
gb|ABB47823.2| DNA-directed RNA polymerase, beta subunit family ... 180 2e-43
gb|AAM92814.1| putative DNA-directed RNA polymerase I subunit, 5... 180 2e-43
ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I sub... 179 3e-43
ref|XP_006366498.1| PREDICTED: probable DNA-directed RNA polymer... 179 4e-43
ref|XP_003574126.1| PREDICTED: DNA-directed RNA polymerase I sub... 179 4e-43
gb|ESW05690.1| hypothetical protein PHAVU_011G201300g [Phaseolus... 178 6e-43
ref|XP_006661904.1| PREDICTED: probable DNA-directed RNA polymer... 177 1e-42
>ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putative [Ricinus communis]
gi|223530519|gb|EEF32401.1| DNA-directed RNA polymerase I
subunit, putative [Ricinus communis]
Length = 1159
Score = 196 bits (499), Expect = 2e-48
Identities = 95/140 (67%), Positives = 114/140 (81%), Gaps = 1/140 (0%)
Frame = -3
Query: 418 KTYHLQTPQSPIVRTASYTKYCMDEFPTGTNAIVAVLSYTGYDMEDAMILNKMSVERGFG 239
K YHLQTPQ+PIVRT+SYTKYC+DE+PTGTNAIVAVL+YTGYDMEDAMILNK SVERG
Sbjct: 710 KLYHLQTPQTPIVRTSSYTKYCVDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMC 769
Query: 238 RGHIYQTESIDLKKK-HESDRVQEIFARSNTDRNMMSSIDSDGLPYVGQIVHPHEPIYST 62
G IYQTE+IDL ++ SDR Q +F RSN D+++ S IDSDGLPYVGQ++HP+EP S
Sbjct: 770 HGQIYQTETIDLSEEGSRSDRAQRMFRRSNIDKSLHSVIDSDGLPYVGQMIHPNEPYCSI 829
Query: 61 YNTLTSTTKPTYSKGSEDAI 2
YN +T+TT+ KGS+ I
Sbjct: 830 YNEITNTTRTNNRKGSDPVI 849
>ref|XP_002297732.2| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|550346693|gb|EEE82537.2| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 1117
Score = 192 bits (489), Expect = 3e-47
Identities = 97/140 (69%), Positives = 111/140 (79%), Gaps = 1/140 (0%)
Frame = -3
Query: 418 KTYHLQTPQSPIVRTASYTKYCMDEFPTGTNAIVAVLSYTGYDMEDAMILNKMSVERGFG 239
K YHLQTPQ+PIVRT +YTKY +DE PTGTNAIVAVL+YTGYDMEDAMILNK SV+RG
Sbjct: 671 KIYHLQTPQTPIVRTGAYTKYSIDEHPTGTNAIVAVLAYTGYDMEDAMILNKSSVDRGMF 730
Query: 238 RGHIYQTESIDLKKK-HESDRVQEIFARSNTDRNMMSSIDSDGLPYVGQIVHPHEPIYST 62
G IYQTE+IDL + SDR F RSNTDR+ S IDSDGLPYVGQI++P+EP S
Sbjct: 731 HGQIYQTETIDLSDEGSRSDRSHRRFRRSNTDRSSHSLIDSDGLPYVGQIINPNEPYCSI 790
Query: 61 YNTLTSTTKPTYSKGSEDAI 2
YN +T+T+KP Y KGSE AI
Sbjct: 791 YNDITNTSKPKYRKGSEPAI 810
>ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Vitis
vinifera]
Length = 1142
Score = 187 bits (476), Expect = 9e-46
Identities = 93/140 (66%), Positives = 113/140 (80%), Gaps = 1/140 (0%)
Frame = -3
Query: 418 KTYHLQTPQSPIVRTASYTKYCMDEFPTGTNAIVAVLSYTGYDMEDAMILNKMSVERGFG 239
K YHLQTPQ+PIVRT++Y KY MDEFPTGTNAIVAVL+Y+GYDMEDAMILNK SV+RG
Sbjct: 694 KLYHLQTPQTPIVRTSAYVKYSMDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLC 753
Query: 238 RGHIYQTESIDLK-KKHESDRVQEIFARSNTDRNMMSSIDSDGLPYVGQIVHPHEPIYST 62
G IYQTE+IDL + ++SDR Q +F RSN D++ S IDSDGLPYVGQ+++P+EP S
Sbjct: 754 HGQIYQTETIDLSDENNKSDRGQRMFRRSNVDKSANSLIDSDGLPYVGQMINPNEPYCSI 813
Query: 61 YNTLTSTTKPTYSKGSEDAI 2
YN +TS+T+ T KGSE I
Sbjct: 814 YNEVTSSTRATKLKGSEPVI 833
>emb|CBI35100.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 187 bits (476), Expect = 9e-46
Identities = 93/140 (66%), Positives = 113/140 (80%), Gaps = 1/140 (0%)
Frame = -3
Query: 418 KTYHLQTPQSPIVRTASYTKYCMDEFPTGTNAIVAVLSYTGYDMEDAMILNKMSVERGFG 239
K YHLQTPQ+PIVRT++Y KY MDEFPTGTNAIVAVL+Y+GYDMEDAMILNK SV+RG
Sbjct: 687 KLYHLQTPQTPIVRTSAYVKYSMDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLC 746
Query: 238 RGHIYQTESIDLK-KKHESDRVQEIFARSNTDRNMMSSIDSDGLPYVGQIVHPHEPIYST 62
G IYQTE+IDL + ++SDR Q +F RSN D++ S IDSDGLPYVGQ+++P+EP S
Sbjct: 747 HGQIYQTETIDLSDENNKSDRGQRMFRRSNVDKSANSLIDSDGLPYVGQMINPNEPYCSI 806
Query: 61 YNTLTSTTKPTYSKGSEDAI 2
YN +TS+T+ T KGSE I
Sbjct: 807 YNEVTSSTRATKLKGSEPVI 826
>gb|EXC31692.1| putative DNA-directed RNA polymerase I subunit RPA2 [Morus notabilis]
Length = 1243
Score = 187 bits (474), Expect = 2e-45
Identities = 93/140 (66%), Positives = 109/140 (77%), Gaps = 1/140 (0%)
Frame = -3
Query: 418 KTYHLQTPQSPIVRTASYTKYCMDEFPTGTNAIVAVLSYTGYDMEDAMILNKMSVERGFG 239
K YHLQTPQSPIVRT++YTKY MD +P+GTNAIVAVL+YTGYDMEDAMILNK SV+RG
Sbjct: 727 KLYHLQTPQSPIVRTSTYTKYNMDAYPSGTNAIVAVLAYTGYDMEDAMILNKSSVDRGMF 786
Query: 238 RGHIYQTESIDLK-KKHESDRVQEIFARSNTDRNMMSSIDSDGLPYVGQIVHPHEPIYST 62
G IYQTE+IDL + + SDRVQ +F RSN DR+M S IDSDGLPYVGQ + P+EP S
Sbjct: 787 HGQIYQTETIDLSDQSNRSDRVQSVFRRSNVDRSMHSLIDSDGLPYVGQTIKPNEPFCSI 846
Query: 61 YNTLTSTTKPTYSKGSEDAI 2
YN +T T+ KGSE +
Sbjct: 847 YNEVTGGTRTMKRKGSEPVV 866
>ref|XP_004982736.1| PREDICTED: LOW QUALITY PROTEIN: probable DNA-directed RNA polymerase
I subunit RPA2-like [Setaria italica]
Length = 1172
Score = 187 bits (474), Expect = 2e-45
Identities = 92/138 (66%), Positives = 109/138 (78%)
Frame = -3
Query: 418 KTYHLQTPQSPIVRTASYTKYCMDEFPTGTNAIVAVLSYTGYDMEDAMILNKMSVERGFG 239
K +HLQTPQ+PIVRTA+Y KYCMDEFP+GTNAIVAVL+YTGYDMEDAMILNK +V+RG
Sbjct: 711 KAFHLQTPQTPIVRTATYGKYCMDEFPSGTNAIVAVLAYTGYDMEDAMILNKSAVDRGMF 770
Query: 238 RGHIYQTESIDLKKKHESDRVQEIFARSNTDRNMMSSIDSDGLPYVGQIVHPHEPIYSTY 59
RGHIYQTE IDL KK+ + V EIFA+S R+ ++IDSDGLP +GQ VHP+E YS Y
Sbjct: 771 RGHIYQTECIDLSKKNR-ENVPEIFAKSVLSRDTSTAIDSDGLPRLGQTVHPNEQYYSVY 829
Query: 58 NTLTSTTKPTYSKGSEDA 5
N LT +P KG+E A
Sbjct: 830 NRLTGAIRPVRLKGTEPA 847
>tpg|DAA49470.1| TPA: hypothetical protein ZEAMMB73_824600 [Zea mays]
Length = 1162
Score = 184 bits (468), Expect = 8e-45
Identities = 92/138 (66%), Positives = 107/138 (77%)
Frame = -3
Query: 418 KTYHLQTPQSPIVRTASYTKYCMDEFPTGTNAIVAVLSYTGYDMEDAMILNKMSVERGFG 239
K +HLQTPQ+PIVRT +YTKYCMDEFP+GTNAIVAVLSYTGYDMEDAMILNK +VERG
Sbjct: 712 KAFHLQTPQTPIVRTGTYTKYCMDEFPSGTNAIVAVLSYTGYDMEDAMILNKSAVERGMF 771
Query: 238 RGHIYQTESIDLKKKHESDRVQEIFARSNTDRNMMSSIDSDGLPYVGQIVHPHEPIYSTY 59
RGHIYQTE IDL K D V E FA+S R+ + IDSDGLP +GQ VHP+E YS +
Sbjct: 772 RGHIYQTECIDLSTK-SRDNVPETFAKSILTRDTSNVIDSDGLPRLGQAVHPNEQYYSVH 830
Query: 58 NTLTSTTKPTYSKGSEDA 5
N+LT+ +P KG+E A
Sbjct: 831 NSLTNVIRPVKLKGTEPA 848
>tpg|DAA49469.1| TPA: hypothetical protein ZEAMMB73_824600 [Zea mays]
Length = 1128
Score = 184 bits (468), Expect = 8e-45
Identities = 92/138 (66%), Positives = 107/138 (77%)
Frame = -3
Query: 418 KTYHLQTPQSPIVRTASYTKYCMDEFPTGTNAIVAVLSYTGYDMEDAMILNKMSVERGFG 239
K +HLQTPQ+PIVRT +YTKYCMDEFP+GTNAIVAVLSYTGYDMEDAMILNK +VERG
Sbjct: 678 KAFHLQTPQTPIVRTGTYTKYCMDEFPSGTNAIVAVLSYTGYDMEDAMILNKSAVERGMF 737
Query: 238 RGHIYQTESIDLKKKHESDRVQEIFARSNTDRNMMSSIDSDGLPYVGQIVHPHEPIYSTY 59
RGHIYQTE IDL K D V E FA+S R+ + IDSDGLP +GQ VHP+E YS +
Sbjct: 738 RGHIYQTECIDLSTK-SRDNVPETFAKSILTRDTSNVIDSDGLPRLGQAVHPNEQYYSVH 796
Query: 58 NTLTSTTKPTYSKGSEDA 5
N+LT+ +P KG+E A
Sbjct: 797 NSLTNVIRPVKLKGTEPA 814
>gb|EOY19647.1| Nuclear RNA polymerase A2 isoform 2 [Theobroma cacao]
Length = 1180
Score = 184 bits (466), Expect = 1e-44
Identities = 91/140 (65%), Positives = 111/140 (79%), Gaps = 1/140 (0%)
Frame = -3
Query: 418 KTYHLQTPQSPIVRTASYTKYCMDEFPTGTNAIVAVLSYTGYDMEDAMILNKMSVERGFG 239
K YHLQTPQ+PIVRT +YTKYCMDE+P+GTNAIVAVL+YTGYDMEDAMILNK SVERG
Sbjct: 732 KLYHLQTPQTPIVRTKTYTKYCMDEYPSGTNAIVAVLAYTGYDMEDAMILNKSSVERGMC 791
Query: 238 RGHIYQTESIDL-KKKHESDRVQEIFARSNTDRNMMSSIDSDGLPYVGQIVHPHEPIYST 62
G IYQTE+IDL K +SDR Q IF R ++DR++ S +DSDGLP+VGQ++ P+EP ST
Sbjct: 792 HGQIYQTETIDLGDDKSKSDRGQRIFKREHSDRSISSCLDSDGLPHVGQVIRPNEPYCST 851
Query: 61 YNTLTSTTKPTYSKGSEDAI 2
N +T++ + KGSE I
Sbjct: 852 INQVTNSKRLYNHKGSETVI 871
>gb|EOY19646.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
Length = 1074
Score = 184 bits (466), Expect = 1e-44
Identities = 91/140 (65%), Positives = 111/140 (79%), Gaps = 1/140 (0%)
Frame = -3
Query: 418 KTYHLQTPQSPIVRTASYTKYCMDEFPTGTNAIVAVLSYTGYDMEDAMILNKMSVERGFG 239
K YHLQTPQ+PIVRT +YTKYCMDE+P+GTNAIVAVL+YTGYDMEDAMILNK SVERG
Sbjct: 605 KLYHLQTPQTPIVRTKTYTKYCMDEYPSGTNAIVAVLAYTGYDMEDAMILNKSSVERGMC 664
Query: 238 RGHIYQTESIDL-KKKHESDRVQEIFARSNTDRNMMSSIDSDGLPYVGQIVHPHEPIYST 62
G IYQTE+IDL K +SDR Q IF R ++DR++ S +DSDGLP+VGQ++ P+EP ST
Sbjct: 665 HGQIYQTETIDLGDDKSKSDRGQRIFKREHSDRSISSCLDSDGLPHVGQVIRPNEPYCST 724
Query: 61 YNTLTSTTKPTYSKGSEDAI 2
N +T++ + KGSE I
Sbjct: 725 INQVTNSKRLYNHKGSETVI 744
>gb|EMJ26191.1| hypothetical protein PRUPE_ppa020507mg [Prunus persica]
Length = 1037
Score = 180 bits (456), Expect = 2e-43
Identities = 91/140 (65%), Positives = 111/140 (79%), Gaps = 1/140 (0%)
Frame = -3
Query: 418 KTYHLQTPQSPIVRTASYTKYCMDEFPTGTNAIVAVLSYTGYDMEDAMILNKMSVERGFG 239
K YHL+TPQSPIVRT++Y KYC+DE+PTGTNAIVAVLSYTGYDMEDAMILNK SV+RG
Sbjct: 596 KLYHLKTPQSPIVRTSAYKKYCIDEYPTGTNAIVAVLSYTGYDMEDAMILNKSSVDRGMF 655
Query: 238 RGHIYQTESIDLK-KKHESDRVQEIFARSNTDRNMMSSIDSDGLPYVGQIVHPHEPIYST 62
G IYQTE+IDL +K SDR ++ F RSN ++N SSIDSDGLPYVGQ + P+E +YS
Sbjct: 656 HGLIYQTETIDLSDQKSRSDRSRKFFRRSNINKN--SSIDSDGLPYVGQTIKPNEELYSI 713
Query: 61 YNTLTSTTKPTYSKGSEDAI 2
+N +T+ ++ KGSE I
Sbjct: 714 HNEVTNESRSIKHKGSEPVI 733
>gb|EEE51207.1| hypothetical protein OsJ_32024 [Oryza sativa Japonica Group]
Length = 1150
Score = 180 bits (456), Expect = 2e-43
Identities = 88/138 (63%), Positives = 106/138 (76%)
Frame = -3
Query: 418 KTYHLQTPQSPIVRTASYTKYCMDEFPTGTNAIVAVLSYTGYDMEDAMILNKMSVERGFG 239
K +HLQTPQ+PIVRTA+Y+KYCMDEFP+GTNAIVAVLSYTGYDMEDAMILNK +V+RG
Sbjct: 700 KAFHLQTPQTPIVRTATYSKYCMDEFPSGTNAIVAVLSYTGYDMEDAMILNKSAVDRGMF 759
Query: 238 RGHIYQTESIDLKKKHESDRVQEIFARSNTDRNMMSSIDSDGLPYVGQIVHPHEPIYSTY 59
RGHI+QTE IDL K D V E F +SN R+ ++I+SDGLP +G+ + P+E YS
Sbjct: 760 RGHIFQTECIDLSAK-SRDNVTEFFCKSNLSRDTTAAIESDGLPRIGENIFPNEQYYSVC 818
Query: 58 NTLTSTTKPTYSKGSEDA 5
N LT T +P KGSE A
Sbjct: 819 NNLTGTVRPIKLKGSEPA 836
>gb|EEC67242.1| hypothetical protein OsI_34174 [Oryza sativa Indica Group]
Length = 1086
Score = 180 bits (456), Expect = 2e-43
Identities = 88/138 (63%), Positives = 106/138 (76%)
Frame = -3
Query: 418 KTYHLQTPQSPIVRTASYTKYCMDEFPTGTNAIVAVLSYTGYDMEDAMILNKMSVERGFG 239
K +HLQTPQ+PIVRTA+Y+KYCMDEFP+GTNAIVAVLSYTGYDMEDAMILNK +V+RG
Sbjct: 636 KAFHLQTPQTPIVRTATYSKYCMDEFPSGTNAIVAVLSYTGYDMEDAMILNKSAVDRGMF 695
Query: 238 RGHIYQTESIDLKKKHESDRVQEIFARSNTDRNMMSSIDSDGLPYVGQIVHPHEPIYSTY 59
RGHI+QTE IDL K D V E F +SN R+ ++I+SDGLP +G+ + P+E YS
Sbjct: 696 RGHIFQTECIDLSAK-SRDNVTEFFCKSNLSRDTTAAIESDGLPRIGENIFPNEQYYSVC 754
Query: 58 NTLTSTTKPTYSKGSEDA 5
N LT T +P KGSE A
Sbjct: 755 NNLTGTVRPIKLKGSEPA 772
>gb|ABB47823.2| DNA-directed RNA polymerase, beta subunit family protein, expressed
[Oryza sativa Japonica Group]
Length = 1044
Score = 180 bits (456), Expect = 2e-43
Identities = 88/138 (63%), Positives = 106/138 (76%)
Frame = -3
Query: 418 KTYHLQTPQSPIVRTASYTKYCMDEFPTGTNAIVAVLSYTGYDMEDAMILNKMSVERGFG 239
K +HLQTPQ+PIVRTA+Y+KYCMDEFP+GTNAIVAVLSYTGYDMEDAMILNK +V+RG
Sbjct: 594 KAFHLQTPQTPIVRTATYSKYCMDEFPSGTNAIVAVLSYTGYDMEDAMILNKSAVDRGMF 653
Query: 238 RGHIYQTESIDLKKKHESDRVQEIFARSNTDRNMMSSIDSDGLPYVGQIVHPHEPIYSTY 59
RGHI+QTE IDL K D V E F +SN R+ ++I+SDGLP +G+ + P+E YS
Sbjct: 654 RGHIFQTECIDLSAK-SRDNVTEFFCKSNLSRDTTAAIESDGLPRIGENIFPNEQYYSVC 712
Query: 58 NTLTSTTKPTYSKGSEDA 5
N LT T +P KGSE A
Sbjct: 713 NNLTGTVRPIKLKGSEPA 730
>gb|AAM92814.1| putative DNA-directed RNA polymerase I subunit, 5'-partial [Oryza
sativa Japonica Group]
Length = 855
Score = 180 bits (456), Expect = 2e-43
Identities = 88/138 (63%), Positives = 106/138 (76%)
Frame = -3
Query: 418 KTYHLQTPQSPIVRTASYTKYCMDEFPTGTNAIVAVLSYTGYDMEDAMILNKMSVERGFG 239
K +HLQTPQ+PIVRTA+Y+KYCMDEFP+GTNAIVAVLSYTGYDMEDAMILNK +V+RG
Sbjct: 405 KAFHLQTPQTPIVRTATYSKYCMDEFPSGTNAIVAVLSYTGYDMEDAMILNKSAVDRGMF 464
Query: 238 RGHIYQTESIDLKKKHESDRVQEIFARSNTDRNMMSSIDSDGLPYVGQIVHPHEPIYSTY 59
RGHI+QTE IDL K D V E F +SN R+ ++I+SDGLP +G+ + P+E YS
Sbjct: 465 RGHIFQTECIDLSAK-SRDNVTEFFCKSNLSRDTTAAIESDGLPRIGENIFPNEQYYSVC 523
Query: 58 NTLTSTTKPTYSKGSEDA 5
N LT T +P KGSE A
Sbjct: 524 NNLTGTVRPIKLKGSEPA 541
>ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Solanum
lycopersicum]
Length = 1184
Score = 179 bits (454), Expect = 3e-43
Identities = 87/140 (62%), Positives = 108/140 (77%), Gaps = 1/140 (0%)
Frame = -3
Query: 418 KTYHLQTPQSPIVRTASYTKYCMDEFPTGTNAIVAVLSYTGYDMEDAMILNKMSVERGFG 239
K YHLQTPQ+PIVRT +Y KYC+D++P GTNAIVAVL+Y+GYDMEDAM+LNK SV+RG
Sbjct: 740 KLYHLQTPQTPIVRTKAYEKYCVDDYPLGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGMC 799
Query: 238 RGHIYQTESIDL-KKKHESDRVQEIFARSNTDRNMMSSIDSDGLPYVGQIVHPHEPIYST 62
GHIYQTE+IDL ++ +SDR Q +F RSN D++ IDSDGLPYVGQ ++P+EP S
Sbjct: 800 HGHIYQTETIDLTEQSAKSDRAQRLFRRSNLDKSSHQLIDSDGLPYVGQRINPNEPYCSI 859
Query: 61 YNTLTSTTKPTYSKGSEDAI 2
YN +TS T KGSE +
Sbjct: 860 YNEITSQTTCMKLKGSEPVV 879
>ref|XP_006366498.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
[Solanum tuberosum]
Length = 1179
Score = 179 bits (453), Expect = 4e-43
Identities = 86/140 (61%), Positives = 108/140 (77%), Gaps = 1/140 (0%)
Frame = -3
Query: 418 KTYHLQTPQSPIVRTASYTKYCMDEFPTGTNAIVAVLSYTGYDMEDAMILNKMSVERGFG 239
K YHLQTPQ+PIVRT +Y KYC+D++P GTNAIVAVL+Y+GYDMEDAM+LNK SV+RG
Sbjct: 735 KLYHLQTPQTPIVRTKAYEKYCVDDYPLGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGMC 794
Query: 238 RGHIYQTESIDL-KKKHESDRVQEIFARSNTDRNMMSSIDSDGLPYVGQIVHPHEPIYST 62
GHIYQTE+IDL ++ +SDR Q +F RSN D++ ID+DGLPYVGQ ++P+EP S
Sbjct: 795 HGHIYQTETIDLTEQSAKSDRAQRLFRRSNLDKSSHQLIDTDGLPYVGQRINPNEPYCSI 854
Query: 61 YNTLTSTTKPTYSKGSEDAI 2
YN +TS T KGSE +
Sbjct: 855 YNEITSQTTSMKLKGSEPVV 874
>ref|XP_003574126.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Brachypodium
distachyon]
Length = 1181
Score = 179 bits (453), Expect = 4e-43
Identities = 92/138 (66%), Positives = 105/138 (76%)
Frame = -3
Query: 418 KTYHLQTPQSPIVRTASYTKYCMDEFPTGTNAIVAVLSYTGYDMEDAMILNKMSVERGFG 239
K +HLQTPQSPIVRTA+Y KY MDEFP+GTNAIVAVLSYTGYDMEDAMILNK +V+RG
Sbjct: 729 KAFHLQTPQSPIVRTATYKKYHMDEFPSGTNAIVAVLSYTGYDMEDAMILNKSAVDRGMF 788
Query: 238 RGHIYQTESIDLKKKHESDRVQEIFARSNTDRNMMSSIDSDGLPYVGQIVHPHEPIYSTY 59
RG IYQTE IDL V EIFA+S+ R+ S IDSDGLP VG+ + P+E YSTY
Sbjct: 789 RGDIYQTECIDLSTTRRGS-VAEIFAKSSLSRDSSSVIDSDGLPRVGETIVPNEQYYSTY 847
Query: 58 NTLTSTTKPTYSKGSEDA 5
NTLT +PT KG+E A
Sbjct: 848 NTLTGAIRPTRLKGTEPA 865
>gb|ESW05690.1| hypothetical protein PHAVU_011G201300g [Phaseolus vulgaris]
Length = 1180
Score = 178 bits (452), Expect = 6e-43
Identities = 90/137 (65%), Positives = 109/137 (79%), Gaps = 1/137 (0%)
Frame = -3
Query: 418 KTYHLQTPQSPIVRTASYTKYCMDEFPTGTNAIVAVLSYTGYDMEDAMILNKMSVERGFG 239
K YHLQTPQ+PIVRT++YTKY +DEFPTGTNAIVAVL+YTGYDMEDAMILNK SVERG
Sbjct: 725 KLYHLQTPQTPIVRTSTYTKYNIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMF 784
Query: 238 RGHIYQTESIDL-KKKHESDRVQEIFARSNTDRNMMSSIDSDGLPYVGQIVHPHEPIYST 62
G IYQTE+IDL +++ +SDR IF +SN ++ SIDSDGLP+VGQ++ P EP S
Sbjct: 785 HGQIYQTETIDLTEQRGKSDRSSRIFRKSNVEKLGCPSIDSDGLPHVGQMIRPDEPYCSI 844
Query: 61 YNTLTSTTKPTYSKGSE 11
YN +TS+T+ KGSE
Sbjct: 845 YNEVTSSTQTYKRKGSE 861
>ref|XP_006661904.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
[Oryza brachyantha]
Length = 1057
Score = 177 bits (450), Expect = 1e-42
Identities = 88/138 (63%), Positives = 104/138 (75%)
Frame = -3
Query: 418 KTYHLQTPQSPIVRTASYTKYCMDEFPTGTNAIVAVLSYTGYDMEDAMILNKMSVERGFG 239
K +HLQTPQ+PIVRTA+Y+KYCMDEFP+GTNAIVAVLSYTGYDMEDAMILNK +V+RG
Sbjct: 603 KAFHLQTPQTPIVRTATYSKYCMDEFPSGTNAIVAVLSYTGYDMEDAMILNKSAVDRGMF 662
Query: 238 RGHIYQTESIDLKKKHESDRVQEIFARSNTDRNMMSSIDSDGLPYVGQIVHPHEPIYSTY 59
RGHIYQTE IDL +K D E F +SN R+ + IDSDGLP +G+ + P+E YS
Sbjct: 663 RGHIYQTECIDLSEK-SRDNAVEFFCKSNLLRDTTAVIDSDGLPCIGEKIFPNEQYYSVC 721
Query: 58 NTLTSTTKPTYSKGSEDA 5
N LT +P KGSE A
Sbjct: 722 NNLTGVVRPVKLKGSEPA 739