BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00047440
         (268 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat...   112   5e-23
ref|XP_006826681.1| hypothetical protein AMTR_s00137p00065490 [A...   111   1e-22
gb|EOX93881.1| Tetratricopeptide repeat (TPR)-like superfamily p...   110   3e-22
ref|XP_006479255.1| PREDICTED: putative pentatricopeptide repeat...   105   5e-21
ref|XP_006443577.1| hypothetical protein CICLE_v10019402mg [Citr...   105   5e-21
ref|XP_006340008.1| PREDICTED: putative pentatricopeptide repeat...   105   8e-21
gb|EMJ00280.1| hypothetical protein PRUPE_ppa019139mg [Prunus pe...   104   1e-20
ref|XP_002465009.1| hypothetical protein SORBIDRAFT_01g030410 [S...   104   1e-20
ref|NP_001065185.1| Os10g0540100 [Oryza sativa Japonica Group] g...   104   1e-20
gb|EAY79370.1| hypothetical protein OsI_34497 [Oryza sativa Indi...   104   1e-20
gb|AAG46111.1|AC073166_9 hypothetical protein [Oryza sativa Japo...   104   1e-20
ref|XP_004292362.1| PREDICTED: putative pentatricopeptide repeat...   103   2e-20
ref|XP_004247284.1| PREDICTED: putative pentatricopeptide repeat...   103   2e-20
ref|XP_006662558.1| PREDICTED: putative pentatricopeptide repeat...    99   6e-19
ref|NP_189142.1| pentatricopeptide repeat-containing protein [Ar...    99   8e-19
gb|EXB99118.1| hypothetical protein L484_007026 [Morus notabilis]      98   1e-18
ref|XP_004983795.1| PREDICTED: putative pentatricopeptide repeat...    97   2e-18
ref|XP_006297261.1| hypothetical protein CARUB_v10013275mg [Caps...    97   3e-18
ref|XP_002521068.1| pentatricopeptide repeat-containing protein,...    96   5e-18
ref|XP_002301797.2| pentatricopeptide repeat-containing family p...    96   6e-18

>ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25060, mitochondrial-like [Vitis vinifera]
          Length = 678

 Score =  112 bits (280), Expect = 5e-23
 Identities = 54/89 (60%), Positives = 70/89 (78%)
 Frame = -2

Query: 267 LRHHLQMNVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEAL 88
           +R  + M+V++ TSLVDMYAKNG L+LA  VF R+  +NV+SWSALISG+AQNG A  AL
Sbjct: 233 IRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSALISGFAQNGFAGNAL 292

Query: 87  QMLIKMQEFGLCPDSVALVSAILACSHIG 1
           Q+++ MQ FG  PDSV+LVS +LACS +G
Sbjct: 293 QLVVDMQSFGYKPDSVSLVSVLLACSQVG 321



 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 34/85 (40%), Positives = 53/85 (62%)
 Frame = -2

Query: 255 LQMNVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEALQMLI 76
           L  + V  T+++DMY+K G L  A+ VFD+IS R+ +SW+A+I+ Y  +G   EAL + +
Sbjct: 337 LHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLFL 396

Query: 75  KMQEFGLCPDSVALVSAILACSHIG 1
           +M+E  + PD     S + A SH G
Sbjct: 397 QMRETNVKPDHATFASLLSAFSHSG 421



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 29/82 (35%), Positives = 53/82 (64%)
 Frame = -2

Query: 246 NVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEALQMLIKMQ 67
           +V +G +++++YAK G +  A  VFD++  R++V W+ +I+G AQNG A EA+ +  +M 
Sbjct: 139 DVFVGAAVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMH 198

Query: 66  EFGLCPDSVALVSAILACSHIG 1
           +  +  D V ++  I AC+ +G
Sbjct: 199 KKRVEGDGVVMLGLIQACTTLG 220


>ref|XP_006826681.1| hypothetical protein AMTR_s00137p00065490 [Amborella trichopoda]
           gi|548831082|gb|ERM93918.1| hypothetical protein
           AMTR_s00137p00065490 [Amborella trichopoda]
          Length = 513

 Score =  111 bits (277), Expect = 1e-22
 Identities = 52/89 (58%), Positives = 71/89 (79%)
 Frame = -2

Query: 267 LRHHLQMNVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEAL 88
           +R  ++++VV+ TSLVD+Y K GFL+ AQ +FDR+  RN+VSWSA++SGYAQNG A++A+
Sbjct: 222 IRRDIKVDVVLETSLVDLYVKFGFLERAQRMFDRMDDRNLVSWSAMVSGYAQNGFAADAI 281

Query: 87  QMLIKMQEFGLCPDSVALVSAILACSHIG 1
              I+MQE G  PD VALVS +LACSH+G
Sbjct: 282 SFFIEMQEEGFSPDVVALVSVLLACSHLG 310



 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 38/85 (44%), Positives = 52/85 (61%)
 Frame = -2

Query: 255 LQMNVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEALQMLI 76
           L+ +VV GT+LVDMYAK G L  A  +FD+IS R+ ++W+A+IS Y  +G    AL +  
Sbjct: 326 LEFDVVSGTALVDMYAKCGSLGKAHVLFDQISSRDAIAWNAMISSYGMHGNGEAALSLFT 385

Query: 75  KMQEFGLCPDSVALVSAILACSHIG 1
           +M E    PD     S + ACSH G
Sbjct: 386 QMLETPSKPDHATFASLLSACSHAG 410



 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 31/82 (37%), Positives = 58/82 (70%)
 Frame = -2

Query: 246 NVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEALQMLIKMQ 67
           +V +G+ L+++YAK   L  A+ VFD ++ R++VSW+++++GY+QNG  +EA  +  +M+
Sbjct: 128 DVFVGSGLLNLYAKCSRLCEARRVFDEMTKRDLVSWTSMVTGYSQNGFGNEAFAVFREME 187

Query: 66  EFGLCPDSVALVSAILACSHIG 1
             G+  DSV +V  + AC+++G
Sbjct: 188 YEGVRADSVVMVGLVQACTNLG 209


>gb|EOX93881.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           [Theobroma cacao]
          Length = 597

 Score =  110 bits (274), Expect = 3e-22
 Identities = 52/89 (58%), Positives = 69/89 (77%)
 Frame = -2

Query: 267 LRHHLQMNVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEAL 88
           +R    M+VV+ TSLVDMYAKNG+L+ A  VF +IS +NV+SW ALISGYAQNG A  AL
Sbjct: 233 IRKGFSMDVVVQTSLVDMYAKNGYLEYASRVFKKISSKNVISWGALISGYAQNGFARNAL 292

Query: 87  QMLIKMQEFGLCPDSVALVSAILACSHIG 1
           ++L++MQ +G  PD V+LVS ++ACS +G
Sbjct: 293 ELLVEMQCYGFKPDLVSLVSTLMACSQVG 321



 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 31/80 (38%), Positives = 49/80 (61%)
 Frame = -2

Query: 240 VIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEALQMLIKMQEF 61
           V  T+++DMYAK G L  A+ +FD+I  R+ +SW+A+I+ Y  +G   EAL + ++M+  
Sbjct: 342 VSATAVIDMYAKCGALSYARALFDQIDSRDRISWNAMIASYGVHGHGKEALSLFLQMRNT 401

Query: 60  GLCPDSVALVSAILACSHIG 1
            L PD     + + A SH G
Sbjct: 402 NLKPDHATFAALLSALSHSG 421



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 28/82 (34%), Positives = 55/82 (67%)
 Frame = -2

Query: 246 NVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEALQMLIKMQ 67
           +V + +S++++YAK G +  A  VF ++  +++V W+ +++G+AQ+GLA EA+ +   MQ
Sbjct: 139 DVFVASSVLNLYAKCGKMDEAMVVFSKMPRKDLVCWTTIVTGFAQSGLAREAIDLYRNMQ 198

Query: 66  EFGLCPDSVALVSAILACSHIG 1
             G+  D V ++  I AC+++G
Sbjct: 199 VEGMEGDGVVMLGLIQACANLG 220


>ref|XP_006479255.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25060, mitochondrial-like [Citrus sinensis]
          Length = 596

 Score =  105 bits (263), Expect = 5e-21
 Identities = 52/89 (58%), Positives = 67/89 (75%)
 Frame = -2

Query: 267 LRHHLQMNVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEAL 88
           +R HL ++V + TSLVDMYAK G L LA  VF  +S  N+V+W ALISG+AQNGLA   L
Sbjct: 233 IRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTL 292

Query: 87  QMLIKMQEFGLCPDSVALVSAILACSHIG 1
           ++L++MQ  G  PDSV+LVSA+LAC+ IG
Sbjct: 293 ELLMEMQSCGFEPDSVSLVSALLACAQIG 321



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 31/82 (37%), Positives = 52/82 (63%)
 Frame = -2

Query: 246 NVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEALQMLIKMQ 67
           N+V+GTS++DMY+K G    A+ +FD++  R+++SW+ +I+ Y  +G   EAL + ++M 
Sbjct: 340 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 399

Query: 66  EFGLCPDSVALVSAILACSHIG 1
           E  + PD     S + A SH G
Sbjct: 400 ETMVKPDHSTFASLLSALSHSG 421



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 25/82 (30%), Positives = 51/82 (62%)
 Frame = -2

Query: 246 NVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEALQMLIKMQ 67
           +V +G+S++++Y K G +  A   F+++  +++V WS++I+G   NG   EA+    +M+
Sbjct: 139 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK 198

Query: 66  EFGLCPDSVALVSAILACSHIG 1
           + G+  D V ++  I AC+ +G
Sbjct: 199 KEGIDGDEVVMMGLIQACADLG 220


>ref|XP_006443577.1| hypothetical protein CICLE_v10019402mg [Citrus clementina]
           gi|557545839|gb|ESR56817.1| hypothetical protein
           CICLE_v10019402mg [Citrus clementina]
          Length = 596

 Score =  105 bits (263), Expect = 5e-21
 Identities = 52/89 (58%), Positives = 67/89 (75%)
 Frame = -2

Query: 267 LRHHLQMNVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEAL 88
           +R HL ++V + TSLVDMYAK G L LA  VF  +S  N+V+W ALISG+AQNGLA   L
Sbjct: 233 IRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTL 292

Query: 87  QMLIKMQEFGLCPDSVALVSAILACSHIG 1
           ++L++MQ  G  PDSV+LVSA+LAC+ IG
Sbjct: 293 ELLMEMQSCGFEPDSVSLVSALLACAQIG 321



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 31/82 (37%), Positives = 52/82 (63%)
 Frame = -2

Query: 246 NVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEALQMLIKMQ 67
           N+V+GTS++DMY+K G    A+ +FD++  R+++SW+ +I+ Y  +G   EAL + ++M 
Sbjct: 340 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 399

Query: 66  EFGLCPDSVALVSAILACSHIG 1
           E  + PD     S + A SH G
Sbjct: 400 ETMVKPDHSTFASLLSALSHSG 421



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 25/82 (30%), Positives = 51/82 (62%)
 Frame = -2

Query: 246 NVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEALQMLIKMQ 67
           +V +G+S++++Y K G +  A   F+++  +++V WS++I+G   NG   EA+    +M+
Sbjct: 139 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK 198

Query: 66  EFGLCPDSVALVSAILACSHIG 1
           + G+  D V ++  I AC+ +G
Sbjct: 199 KEGIDGDEVVMMGLIQACADLG 220


>ref|XP_006340008.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25060, mitochondrial-like [Solanum tuberosum]
          Length = 675

 Score =  105 bits (261), Expect = 8e-21
 Identities = 55/89 (61%), Positives = 67/89 (75%)
 Frame = -2

Query: 267 LRHHLQMNVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEAL 88
           +R  L M+V I TSLVDMYAKNG L++A  VF ++  RN V+WSALISGYAQNG A  AL
Sbjct: 231 IRRALPMDVNILTSLVDMYAKNGELEIATRVFRKMPFRNTVTWSALISGYAQNGFAVNAL 290

Query: 87  QMLIKMQEFGLCPDSVALVSAILACSHIG 1
           Q+LI+MQ  G  PD  +LVSA+LACS +G
Sbjct: 291 QLLIEMQLLGFTPDVASLVSALLACSDVG 319



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 29/83 (34%), Positives = 51/83 (61%)
 Frame = -2

Query: 249 MNVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEALQMLIKM 70
           M+ V+ T L+DMYAK G +  A+ ++DRIS ++++ W+ +I+ Y  +G   EAL +  +M
Sbjct: 337 MDQVLSTGLIDMYAKCGLISCARSIYDRISSKDLICWNTIIACYGIHGQGREALTLFQQM 396

Query: 69  QEFGLCPDSVALVSAILACSHIG 1
           ++  + PD     + + A SH G
Sbjct: 397 KD-EIEPDHATFAALLSALSHSG 418



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 27/81 (33%), Positives = 53/81 (65%)
 Frame = -2

Query: 246 NVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEALQMLIKMQ 67
           +V +G+S++++YAK G +  A  VF+++  R+VV W+ +I+G+ Q+G   EA+ +  +MQ
Sbjct: 137 DVFVGSSVLNLYAKCGKMDKAGAVFEKMQRRDVVCWTTMITGFVQSGKGREAVDLYRRMQ 196

Query: 66  EFGLCPDSVALVSAILACSHI 4
             G+  D V ++  + A ++I
Sbjct: 197 REGMVGDGVVMLGLMQASANI 217


>gb|EMJ00280.1| hypothetical protein PRUPE_ppa019139mg [Prunus persica]
          Length = 607

 Score =  104 bits (260), Expect = 1e-20
 Identities = 51/89 (57%), Positives = 69/89 (77%)
 Frame = -2

Query: 267 LRHHLQMNVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEAL 88
           +R  L M+V++ TSLV MYAK+G L+LA  VF+++  +N +SW ALISG+AQNG A  AL
Sbjct: 233 IRTGLPMDVMVQTSLVHMYAKSGHLELASCVFNKMPYKNAISWGALISGFAQNGFAGHAL 292

Query: 87  QMLIKMQEFGLCPDSVALVSAILACSHIG 1
           +ML++MQ  G  PDSV+LVSA+LACS +G
Sbjct: 293 EMLVEMQGSGFEPDSVSLVSALLACSQVG 321



 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 34/85 (40%), Positives = 54/85 (63%)
 Frame = -2

Query: 255 LQMNVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEALQMLI 76
           L  + V+GT+L+DMY+K G L  A+ +FD+I  R+++SW+A+I+ Y  +G   EAL + +
Sbjct: 337 LDFDEVLGTALIDMYSKCGSLSYARALFDQIVSRDLISWNAMIASYGIHGHGEEALVLFL 396

Query: 75  KMQEFGLCPDSVALVSAILACSHIG 1
           +M E  + PD     S + A SH G
Sbjct: 397 QMTETNIKPDHATFASLLSAFSHSG 421



 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 28/84 (33%), Positives = 55/84 (65%)
 Frame = -2

Query: 252 QMNVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEALQMLIK 73
           + +V +G+S++++YAK G +  A  VF+++  R++V W+ +++G+ Q+G   EA+ M  +
Sbjct: 137 EYDVFVGSSVLNLYAKCGKMDEAVVVFNKMPRRDLVCWTTMVTGFVQSGRPMEAVDMYKR 196

Query: 72  MQEFGLCPDSVALVSAILACSHIG 1
           MQ  G+  D V L+  + AC+ +G
Sbjct: 197 MQNEGMEFDGVVLMGLVQACASLG 220


>ref|XP_002465009.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
           gi|241918863|gb|EER92007.1| hypothetical protein
           SORBIDRAFT_01g030410 [Sorghum bicolor]
          Length = 684

 Score =  104 bits (260), Expect = 1e-20
 Identities = 54/89 (60%), Positives = 67/89 (75%)
 Frame = -2

Query: 267 LRHHLQMNVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEAL 88
           LRH ++M+VVI TSLVDMYAKNG   +A+ VF  +  RN VSW+ALISG+AQNG A EAL
Sbjct: 239 LRHGMRMDVVIATSLVDMYAKNGHFDVARQVFRMMPYRNAVSWNALISGFAQNGHADEAL 298

Query: 87  QMLIKMQEFGLCPDSVALVSAILACSHIG 1
            +  +M   GL PDS ALVSA+LAC+ +G
Sbjct: 299 DLFREMSTSGLQPDSGALVSALLACADVG 327



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 29/85 (34%), Positives = 54/85 (63%)
 Frame = -2

Query: 255 LQMNVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEALQMLI 76
           L+   ++GT+++DMY+K G L+ A+ +F+++S R++V W+A+I+    +G   +AL +  
Sbjct: 343 LEFQCILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAMIACCGTHGCGHDALALFQ 402

Query: 75  KMQEFGLCPDSVALVSAILACSHIG 1
           ++ E G+ PD     S + A SH G
Sbjct: 403 ELNETGIKPDHATFASLLSALSHSG 427


>ref|NP_001065185.1| Os10g0540100 [Oryza sativa Japonica Group]
           gi|78708963|gb|ABB47938.1| PPR986-12, putative,
           expressed [Oryza sativa Japonica Group]
           gi|113639794|dbj|BAF27099.1| Os10g0540100 [Oryza sativa
           Japonica Group] gi|125575555|gb|EAZ16839.1| hypothetical
           protein OsJ_32311 [Oryza sativa Japonica Group]
           gi|215704329|dbj|BAG93763.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 681

 Score =  104 bits (259), Expect = 1e-20
 Identities = 55/89 (61%), Positives = 68/89 (76%)
 Frame = -2

Query: 267 LRHHLQMNVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEAL 88
           LRH ++M+VV  TSLVDMYAKNG L +A  VF  +  RN VSWSA+ISG+AQNG + EAL
Sbjct: 236 LRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEAL 295

Query: 87  QMLIKMQEFGLCPDSVALVSAILACSHIG 1
           ++   MQ  G+ PDS ALVSA+LACS+IG
Sbjct: 296 RLFRNMQASGIQPDSGALVSALLACSNIG 324



 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 31/82 (37%), Positives = 50/82 (60%)
 Frame = -2

Query: 246 NVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEALQMLIKMQ 67
           N ++GT+ +DMY+K G L  AQ +F+ IS R+++ W+A+I+    +G   +AL +  +M 
Sbjct: 343 NCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMN 402

Query: 66  EFGLCPDSVALVSAILACSHIG 1
           E G+ PD     S + A SH G
Sbjct: 403 ETGMRPDHATFASLLSALSHSG 424


>gb|EAY79370.1| hypothetical protein OsI_34497 [Oryza sativa Indica Group]
          Length = 681

 Score =  104 bits (259), Expect = 1e-20
 Identities = 55/89 (61%), Positives = 68/89 (76%)
 Frame = -2

Query: 267 LRHHLQMNVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEAL 88
           LRH ++M+VV  TSLVDMYAKNG L +A  VF  +  RN VSWSA+ISG+AQNG + EAL
Sbjct: 236 LRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEAL 295

Query: 87  QMLIKMQEFGLCPDSVALVSAILACSHIG 1
           ++   MQ  G+ PDS ALVSA+LACS+IG
Sbjct: 296 RLFRNMQASGIQPDSGALVSALLACSNIG 324



 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 31/82 (37%), Positives = 50/82 (60%)
 Frame = -2

Query: 246 NVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEALQMLIKMQ 67
           N ++GT+ +DMY+K G L  AQ +F+ IS R+++ W+A+I+    +G   +AL +  +M 
Sbjct: 343 NCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMN 402

Query: 66  EFGLCPDSVALVSAILACSHIG 1
           E G+ PD     S + A SH G
Sbjct: 403 ETGMRPDHATFASLLSALSHSG 424



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/79 (35%), Positives = 50/79 (63%)
 Frame = -2

Query: 246 NVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEALQMLIKMQ 67
           +V + +SL+ +YA+ G +  A  VFDR+  R+ V+WS +++G+   G   +A+QM  +M+
Sbjct: 142 DVFVCSSLLHLYARWGAMGDAVKVFDRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMR 201

Query: 66  EFGLCPDSVALVSAILACS 10
           E G+  D V ++  I AC+
Sbjct: 202 EDGVKGDEVVMIGVIQACT 220


>gb|AAG46111.1|AC073166_9 hypothetical protein [Oryza sativa Japonica Group]
          Length = 787

 Score =  104 bits (259), Expect = 1e-20
 Identities = 55/89 (61%), Positives = 68/89 (76%)
 Frame = -2

Query: 267 LRHHLQMNVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEAL 88
           LRH ++M+VV  TSLVDMYAKNG L +A  VF  +  RN VSWSA+ISG+AQNG + EAL
Sbjct: 236 LRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEAL 295

Query: 87  QMLIKMQEFGLCPDSVALVSAILACSHIG 1
           ++   MQ  G+ PDS ALVSA+LACS+IG
Sbjct: 296 RLFRNMQASGIQPDSGALVSALLACSNIG 324



 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 31/82 (37%), Positives = 50/82 (60%)
 Frame = -2

Query: 246 NVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEALQMLIKMQ 67
           N ++GT+ +DMY+K G L  AQ +F+ IS R+++ W+A+I+    +G   +AL +  +M 
Sbjct: 343 NCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMN 402

Query: 66  EFGLCPDSVALVSAILACSHIG 1
           E G+ PD     S + A SH G
Sbjct: 403 ETGMRPDHATFASLLSALSHSG 424


>ref|XP_004292362.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25060, mitochondrial-like [Fragaria vesca subsp.
           vesca]
          Length = 613

 Score =  103 bits (258), Expect = 2e-20
 Identities = 47/89 (52%), Positives = 71/89 (79%)
 Frame = -2

Query: 267 LRHHLQMNVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEAL 88
           +R  + M+V++ TSLVDMYAK+G L+LA  VF++++C+  +SW AL+SG+AQNG A +AL
Sbjct: 233 IRRGVPMDVMVQTSLVDMYAKSGHLELACCVFNKMTCKTAISWGALVSGFAQNGFAVQAL 292

Query: 87  QMLIKMQEFGLCPDSVALVSAILACSHIG 1
           + +++MQ  G  PDSV+LVS++LACS +G
Sbjct: 293 ETVLEMQSCGFEPDSVSLVSSLLACSQVG 321



 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 31/85 (36%), Positives = 54/85 (63%)
 Frame = -2

Query: 255 LQMNVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEALQMLI 76
           +++  V GT+++DMY+K G L  A+ +FD++  R+++SW+A+I+ Y  +G   EAL + +
Sbjct: 337 VEIGQVCGTAVIDMYSKCGSLSYARALFDQLVFRDLISWNAMIASYGIHGRGEEALSLFL 396

Query: 75  KMQEFGLCPDSVALVSAILACSHIG 1
           +M E  + PD     S + A SH G
Sbjct: 397 QMAETNIEPDHATFASLLSAFSHSG 421


>ref|XP_004247284.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25060, mitochondrial-like [Solanum lycopersicum]
          Length = 675

 Score =  103 bits (258), Expect = 2e-20
 Identities = 54/89 (60%), Positives = 66/89 (74%)
 Frame = -2

Query: 267 LRHHLQMNVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEAL 88
           +R  L M+V + TSLVDMYAKNG L+ A  VF ++  RN V+WSALISGYAQNG A  AL
Sbjct: 231 IRRSLNMDVNVLTSLVDMYAKNGELEKATRVFRKMPFRNTVTWSALISGYAQNGFAVNAL 290

Query: 87  QMLIKMQEFGLCPDSVALVSAILACSHIG 1
           Q+LI+MQ  G  PD  +LVSA+LACS +G
Sbjct: 291 QLLIEMQLLGFTPDVASLVSALLACSDVG 319



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 27/81 (33%), Positives = 53/81 (65%)
 Frame = -2

Query: 246 NVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEALQMLIKMQ 67
           +V +G+S++++Y+K G +  A  VF+++  R+VV W+ +I+G+ Q+G   EA+ +  +MQ
Sbjct: 137 DVFVGSSVLNLYSKCGKMDKAGAVFEKMQRRDVVCWTTMITGFVQSGKGREAVDLYRRMQ 196

Query: 66  EFGLCPDSVALVSAILACSHI 4
             G+  D V ++  I A ++I
Sbjct: 197 REGMVGDGVVMLGLIQASANI 217


>ref|XP_006662558.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25060, mitochondrial-like [Oryza brachyantha]
          Length = 606

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 51/89 (57%), Positives = 63/89 (70%)
 Frame = -2

Query: 267 LRHHLQMNVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEAL 88
           LRH ++M+VV  TSLVDMY+KNG   +A+ VF  +  RN VSW ALISG+A NG + EAL
Sbjct: 78  LRHGMRMDVVTATSLVDMYSKNGLFDVARQVFGLMVHRNAVSWGALISGFAHNGHSDEAL 137

Query: 87  QMLIKMQEFGLCPDSVALVSAILACSHIG 1
            +  KMQ  G  PDS AL+SA+L CS IG
Sbjct: 138 HLFRKMQVSGFQPDSGALISALLVCSDIG 166



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 28/84 (33%), Positives = 50/84 (59%)
 Frame = -2

Query: 252 QMNVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEALQMLIK 73
           + + V+GT+ ++MY+K G L  AQ +F+ I  R+++ W+A+I+    +G   +AL +  +
Sbjct: 183 EFDCVLGTAAINMYSKCGSLASAQMLFNMIGARDLILWNAIIACCCAHGRGQDALTLFQE 242

Query: 72  MQEFGLCPDSVALVSAILACSHIG 1
           M + G+ PD     S + A SH G
Sbjct: 243 MNKTGMRPDHATFASLLSALSHSG 266


>ref|NP_189142.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75273633|sp|Q9LJR6.1|PP253_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At3g25060, mitochondrial; Flags: Precursor
           gi|9293988|dbj|BAB01891.1| unnamed protein product
           [Arabidopsis thaliana] gi|332643452|gb|AEE76973.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 601

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 47/88 (53%), Positives = 64/88 (72%)
 Frame = -2

Query: 264 RHHLQMNVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEALQ 85
           R  L MNVV+ TSLVDMYAK GF+++A  VF R+  +  VSW +LISG+AQNGLA++A +
Sbjct: 245 RTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFE 304

Query: 84  MLIKMQEFGLCPDSVALVSAILACSHIG 1
            +++MQ  G  PD V LV  ++ACS +G
Sbjct: 305 AVVEMQSLGFQPDLVTLVGVLVACSQVG 332



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 29/89 (32%), Positives = 52/89 (58%)
 Frame = -2

Query: 267 LRHHLQMNVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEAL 88
           L+ H+ ++ V  T+L+DMY+K G L  ++ +F+ +  +++V W+ +IS Y  +G   E +
Sbjct: 345 LKRHV-LDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVV 403

Query: 87  QMLIKMQEFGLCPDSVALVSAILACSHIG 1
            + +KM E  + PD     S + A SH G
Sbjct: 404 SLFLKMTESNIEPDHATFASLLSALSHSG 432


>gb|EXB99118.1| hypothetical protein L484_007026 [Morus notabilis]
          Length = 592

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 49/89 (55%), Positives = 68/89 (76%)
 Frame = -2

Query: 267 LRHHLQMNVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEAL 88
           +R    M+V++ TSLVDMY+K G L+ A  VFD +S +NVVSW ALI+G+AQNGLA  AL
Sbjct: 227 IRRDHPMDVMLQTSLVDMYSKTGKLEYACCVFDIMSHKNVVSWGALIAGHAQNGLAGNAL 286

Query: 87  QMLIKMQEFGLCPDSVALVSAILACSHIG 1
           ++L++MQ  G  P+ V+L+SA+LACS +G
Sbjct: 287 ELLVEMQNCGFKPNLVSLLSALLACSQLG 315



 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 37/88 (42%), Positives = 54/88 (61%)
 Frame = -2

Query: 264 RHHLQMNVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEALQ 85
           RH +    V GT+++DMY+K G L  AQ +FDR   R+++ W+A+I+ Y  +G   EAL 
Sbjct: 330 RHDIDQ--VSGTAVIDMYSKCGSLSCAQALFDRTKTRDLIFWNAMITSYGIHGQGEEALS 387

Query: 84  MLIKMQEFGLCPDSVALVSAILACSHIG 1
           + +KM+E GL PD     S + A SH G
Sbjct: 388 LFLKMREAGLKPDHTTFASLLSALSHSG 415



 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 28/89 (31%), Positives = 58/89 (65%)
 Frame = -2

Query: 267 LRHHLQMNVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEAL 88
           + H  + +  +G+S++++YAK G +  A+ VFD++  R++V W+++I+G+ ++G   EA+
Sbjct: 126 IEHGYEYDAFVGSSVLNLYAKCGKIDEARAVFDKLPRRDLVCWTSMITGFVKSGGPLEAV 185

Query: 87  QMLIKMQEFGLCPDSVALVSAILACSHIG 1
            M  +MQ+  L  D V ++  + AC+ +G
Sbjct: 186 DMYRRMQKEELEADGVVMLGLMQACASLG 214


>ref|XP_004983795.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25060, mitochondrial-like [Setaria italica]
          Length = 680

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 53/89 (59%), Positives = 64/89 (71%)
 Frame = -2

Query: 267 LRHHLQMNVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEAL 88
           LRH ++M+V   TSLVDMYAKN    +A+ VF  +  RN VSWSALISG AQNG A EAL
Sbjct: 235 LRHGMRMDVFTSTSLVDMYAKNRQFDVARRVFRMMPYRNAVSWSALISGLAQNGHADEAL 294

Query: 87  QMLIKMQEFGLCPDSVALVSAILACSHIG 1
            +  +MQ  GL PDS ALVSA+LAC+ +G
Sbjct: 295 DLFREMQVSGLQPDSGALVSALLACADMG 323



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 27/85 (31%), Positives = 51/85 (60%)
 Frame = -2

Query: 255 LQMNVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEALQMLI 76
           L+ + ++GT++++MY+K G L  AQ +F  +   ++V W+A+I+ Y  +G   +AL +  
Sbjct: 339 LEFDCILGTAVINMYSKCGSLASAQMLFSGVGSGDLVFWNAMIACYGAHGRGRDALALFQ 398

Query: 75  KMQEFGLCPDSVALVSAILACSHIG 1
           ++ + G+ PD     S + A SH G
Sbjct: 399 ELNDTGIRPDHATFASLLSALSHSG 423



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 29/82 (35%), Positives = 52/82 (63%)
 Frame = -2

Query: 246 NVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEALQMLIKMQ 67
           +V + ++L+ +Y++ G +  A  VFDR+  R+ V+WS +++G+   G   EAL M ++M+
Sbjct: 141 DVFVCSALLHLYSRCGSMGGAVKVFDRMPRRDRVAWSTMVAGFLSAGRPLEALDMYMRMR 200

Query: 66  EFGLCPDSVALVSAILACSHIG 1
           E G+  D V +V  I AC+ +G
Sbjct: 201 EDGVEGDEVVMVGVIQACAAVG 222


>ref|XP_006297261.1| hypothetical protein CARUB_v10013275mg [Capsella rubella]
           gi|482565970|gb|EOA30159.1| hypothetical protein
           CARUB_v10013275mg [Capsella rubella]
          Length = 599

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 46/83 (55%), Positives = 59/83 (71%)
 Frame = -2

Query: 249 MNVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEALQMLIKM 70
           MNVV+ TSLVDMYAK GF++LA  VF R+  +  VSW +LISG+AQNGLAS A   +++M
Sbjct: 242 MNVVVETSLVDMYAKVGFIELASRVFSRMMFKTTVSWGSLISGFAQNGLASNAFDAVVEM 301

Query: 69  QEFGLCPDSVALVSAILACSHIG 1
           Q  G  PD   LV  ++ACS +G
Sbjct: 302 QSLGFQPDLATLVGVLVACSQVG 324



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 31/89 (34%), Positives = 54/89 (60%)
 Frame = -2

Query: 267 LRHHLQMNVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEAL 88
           L+ H+ +N V  T+L+DMY+K G L  ++ +F+++  +++V W+ +IS Y  +G   E +
Sbjct: 337 LKRHV-LNRVAATALMDMYSKCGALSTSREIFEQVGKKDLVCWNTMISCYGIHGNGQEVV 395

Query: 87  QMLIKMQEFGLCPDSVALVSAILACSHIG 1
            M +KM+E  + PD     S + A SH G
Sbjct: 396 SMFLKMRESNIEPDHATFTSLLSALSHSG 424


>ref|XP_002521068.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539637|gb|EEF41219.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 579

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 45/89 (50%), Positives = 66/89 (74%)
 Frame = -2

Query: 267 LRHHLQMNVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEAL 88
           +R  + M+ V+ TSL+DMYAKNG L+LA  VF+ I  ++V+SW ALISG+AQNG A++ L
Sbjct: 212 VRREMNMDNVLQTSLIDMYAKNGKLELASRVFEGIPYKSVISWGALISGFAQNGFANKTL 271

Query: 87  QMLIKMQEFGLCPDSVALVSAILACSHIG 1
             L++MQ  G  PD V+L+S++ AC+ +G
Sbjct: 272 ASLVEMQNSGFKPDLVSLISSLSACAQVG 300



 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 37/85 (43%), Positives = 55/85 (64%)
 Frame = -2

Query: 255 LQMNVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEALQMLI 76
           L ++ V GT+L+DMYAK G L  A+ +FD+I  R+++ W+A+IS Y  +G   EAL + +
Sbjct: 316 LYLDKVSGTALIDMYAKCGALTFARALFDQIEPRDLILWNAMISSYGIHGDGIEALSLFL 375

Query: 75  KMQEFGLCPDSVALVSAILACSHIG 1
           KM+E  + PD     S + ACSH G
Sbjct: 376 KMKETNITPDHATFASLLSACSHSG 400



 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 30/82 (36%), Positives = 55/82 (67%)
 Frame = -2

Query: 246 NVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEALQMLIKMQ 67
           +V + +S++++YAK+G +  A+ VFD++  R+VVSW+ +I+G+AQ+G   +A+ +   MQ
Sbjct: 118 DVFVVSSVLNLYAKSGKMDKAKIVFDKMVKRDVVSWTTMITGFAQSGRPLDAIDIYRTMQ 177

Query: 66  EFGLCPDSVALVSAILACSHIG 1
           +     D V +V  I AC+ +G
Sbjct: 178 KERTEGDGVVMVGLIQACTSLG 199


>ref|XP_002301797.2| pentatricopeptide repeat-containing family protein, partial
           [Populus trichocarpa] gi|550345752|gb|EEE81070.2|
           pentatricopeptide repeat-containing family protein,
           partial [Populus trichocarpa]
          Length = 599

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 48/88 (54%), Positives = 63/88 (71%)
 Frame = -2

Query: 264 RHHLQMNVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEALQ 85
           R  L  +V++ TSLVDMYAK G L+LA  VF+++  +N VSW ALISG+AQNG A  AL 
Sbjct: 236 REMLMDDVILQTSLVDMYAKIGDLELASRVFEQMPRKNAVSWGALISGFAQNGFAEYALD 295

Query: 84  MLIKMQEFGLCPDSVALVSAILACSHIG 1
           +L++MQ     PD+  LVSA+LACS +G
Sbjct: 296 LLVEMQSLEFKPDTAVLVSALLACSQVG 323



 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 34/85 (40%), Positives = 51/85 (60%)
 Frame = -2

Query: 255 LQMNVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEALQMLI 76
           L   +V+GT+L+DMYAK G L  A  +FDR+  R+V+ W+ +I+ Y  +G   E L + +
Sbjct: 339 LGFELVLGTALIDMYAKCGSLSCAHAIFDRVDSRDVILWNTMIASYGIHGDGKEVLSLFL 398

Query: 75  KMQEFGLCPDSVALVSAILACSHIG 1
           KM+E  + PD     S + A SH G
Sbjct: 399 KMKEANISPDHATFASLLSALSHSG 423



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 29/82 (35%), Positives = 55/82 (67%)
 Frame = -2

Query: 246 NVVIGTSLVDMYAKNGFLKLAQFVFDRISCRNVVSWSALISGYAQNGLASEALQMLIKMQ 67
           +V +G+S++++Y K G +  A+ VFD++  R+VV W+ +I+G  QNG   EA+ M  +M+
Sbjct: 140 DVFVGSSVLNLYVKCGKIDEAKLVFDKMVKRDVVCWATMITGLVQNGNVLEAVDMFRRMR 199

Query: 66  EFGLCPDSVALVSAILACSHIG 1
           + G+  D V ++  + AC+++G
Sbjct: 200 KEGIEGDGVLMLGLVQACANLG 221