BLASTX nr result

ID: Zingiber23_contig00047264 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00047264
         (286 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ02994.1| hypothetical protein PRUPE_ppa003245mg [Prunus pe...    62   6e-08
ref|XP_004298070.1| PREDICTED: pentatricopeptide repeat-containi...    61   1e-07
emb|CBI19924.3| unnamed protein product [Vitis vinifera]               59   7e-07
ref|XP_002279206.1| PREDICTED: pentatricopeptide repeat-containi...    59   7e-07
gb|EOY16503.1| Tetratricopeptide repeat (TPR)-like superfamily p...    56   4e-06
ref|XP_006356336.1| PREDICTED: pentatricopeptide repeat-containi...    55   7e-06

>gb|EMJ02994.1| hypothetical protein PRUPE_ppa003245mg [Prunus persica]
          Length = 589

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 40/96 (41%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
 Frame = +2

Query: 5   TSPAATSA--STIIRHLDSGDLRKAIATLSSSASPFPDNVYAXXXXXXXXXXXXXXXXXX 178
           ++P A  A  STI+ HLDSG L KA++ L +S  PF  ++YA                  
Sbjct: 23  SNPTAVKAISSTILTHLDSGHLPKAVSILFASPHPFQFSLYARLFQLCSSNHAILEVRKV 82

Query: 179 XXHLVAFXXXXXXXIFLLNRTIVTYARCGSPADARE 286
             HLV F       IFLLNR I  YA+CGS  DARE
Sbjct: 83  ESHLVTF--SPVPPIFLLNRAIEAYAKCGSLGDARE 116


>ref|XP_004298070.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g26540-like [Fragaria vesca subsp. vesca]
          Length = 693

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 37/93 (39%), Positives = 48/93 (51%)
 Frame = +2

Query: 8   SPAATSASTIIRHLDSGDLRKAIATLSSSASPFPDNVYAXXXXXXXXXXXXXXXXXXXXH 187
           S A  + + I+ HL SG LRKA++ L S+  PF  ++Y+                    H
Sbjct: 26  SEAKAATAAILSHLSSGHLRKAVSLLFSTPFPFHFSLYSHLFHLCSSSRSLLETRKLESH 85

Query: 188 LVAFXXXXXXXIFLLNRTIVTYARCGSPADARE 286
           LV F       IFLLNRTI +YA+CGS  DARE
Sbjct: 86  LVTFSPTPP--IFLLNRTIESYAKCGSLGDARE 116


>emb|CBI19924.3| unnamed protein product [Vitis vinifera]
          Length = 912

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 34/94 (36%), Positives = 47/94 (50%)
 Frame = +2

Query: 5   TSPAATSASTIIRHLDSGDLRKAIATLSSSASPFPDNVYAXXXXXXXXXXXXXXXXXXXX 184
           T   A + +T++ HL++G LRKA++ L +S  PFP ++YA                    
Sbjct: 25  TDSKALTTTTVLTHLNAGRLRKAVSILFASPVPFPFSLYARLFQICSSNLAIVEARKVES 84

Query: 185 HLVAFXXXXXXXIFLLNRTIVTYARCGSPADARE 286
           HL+ F       IFLLNR I TY +C    DARE
Sbjct: 85  HLITF--SPAPPIFLLNRAIETYGKCSCLDDARE 116


>ref|XP_002279206.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26540
           [Vitis vinifera]
          Length = 711

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 34/94 (36%), Positives = 47/94 (50%)
 Frame = +2

Query: 5   TSPAATSASTIIRHLDSGDLRKAIATLSSSASPFPDNVYAXXXXXXXXXXXXXXXXXXXX 184
           T   A + +T++ HL++G LRKA++ L +S  PFP ++YA                    
Sbjct: 25  TDSKALTTTTVLTHLNAGRLRKAVSILFASPVPFPFSLYARLFQICSSNLAIVEARKVES 84

Query: 185 HLVAFXXXXXXXIFLLNRTIVTYARCGSPADARE 286
           HL+ F       IFLLNR I TY +C    DARE
Sbjct: 85  HLITF--SPAPPIFLLNRAIETYGKCSCLDDARE 116


>gb|EOY16503.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           [Theobroma cacao]
          Length = 731

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 32/85 (37%), Positives = 42/85 (49%)
 Frame = +2

Query: 32  TIIRHLDSGDLRKAIATLSSSASPFPDNVYAXXXXXXXXXXXXXXXXXXXXHLVAFXXXX 211
           +I+ HL SG L+KA++ L +   PFP ++YA                    HLV F    
Sbjct: 54  SILTHLKSGRLQKAVSVLFAYPEPFPHSLYAHLFHLCSAKDAIVEARKLESHLVTF--CP 111

Query: 212 XXXIFLLNRTIVTYARCGSPADARE 286
              +FLLNR I TY +CG   DARE
Sbjct: 112 LPPVFLLNRAIETYGKCGCLVDARE 136


>ref|XP_006356336.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g26540-like [Solanum tuberosum]
          Length = 698

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 35/94 (37%), Positives = 44/94 (46%)
 Frame = +2

Query: 5   TSPAATSASTIIRHLDSGDLRKAIATLSSSASPFPDNVYAXXXXXXXXXXXXXXXXXXXX 184
           +S A    +TII HL  G L KA++ L S+  PFP  +YA                    
Sbjct: 28  SSQAKALTTTIINHLRLGRLGKAVSVLFSAPVPFPFALYAHLFRICASKKAIVEVRKVES 87

Query: 185 HLVAFXXXXXXXIFLLNRTIVTYARCGSPADARE 286
           HLV+F       +FLLNR I  Y +CG   DARE
Sbjct: 88  HLVSF--APTPPVFLLNRAIEAYGKCGCLVDARE 119


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