BLASTX nr result
ID: Zingiber23_contig00047175
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00047175
(523 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002460193.1| hypothetical protein SORBIDRAFT_02g024370 [S... 100 2e-19
ref|XP_004956779.1| PREDICTED: DNA mismatch repair protein MSH6-... 95 1e-17
gb|AAF35250.1|AF227632_1 mismatch binding protein Mus3 [Zea mays] 93 4e-17
gb|ACN36611.1| unknown [Zea mays] 93 4e-17
gb|EMS59892.1| DNA mismatch repair protein Msh6-1 [Triticum urartu] 90 3e-16
ref|XP_003576514.1| PREDICTED: DNA mismatch repair protein Msh6-... 89 5e-16
dbj|BAK02401.1| predicted protein [Hordeum vulgare subsp. vulgare] 88 1e-15
gb|EMT09462.1| DNA mismatch repair protein Msh6-1 [Aegilops taus... 87 2e-15
gb|EMJ02419.1| hypothetical protein PRUPE_ppa000344mg [Prunus pe... 87 2e-15
ref|XP_006661208.1| PREDICTED: DNA mismatch repair protein MSH6-... 87 2e-15
dbj|BAD36244.1| putative mismatch binding protein Mus3 [Oryza sa... 86 5e-15
gb|EAZ44682.1| hypothetical protein OsJ_29308 [Oryza sativa Japo... 86 5e-15
gb|EAZ09056.1| hypothetical protein OsI_31317 [Oryza sativa Indi... 86 5e-15
ref|XP_006604739.1| PREDICTED: DNA mismatch repair protein MSH6-... 83 3e-14
emb|CBI36942.3| unnamed protein product [Vitis vinifera] 82 1e-13
ref|XP_002275930.1| PREDICTED: DNA mismatch repair protein Msh6-... 82 1e-13
gb|AAT67045.1| DNA mismatch repair protein [Petunia x hybrida] 81 2e-13
gb|EXB28598.1| DNA mismatch repair protein Msh6-1 [Morus notabilis] 80 3e-13
ref|XP_004136154.1| PREDICTED: DNA mismatch repair protein MSH6-... 80 4e-13
ref|XP_006349194.1| PREDICTED: DNA mismatch repair protein MSH6-... 79 6e-13
>ref|XP_002460193.1| hypothetical protein SORBIDRAFT_02g024370 [Sorghum bicolor]
gi|241923570|gb|EER96714.1| hypothetical protein
SORBIDRAFT_02g024370 [Sorghum bicolor]
Length = 638
Score = 100 bits (250), Expect = 2e-19
Identities = 49/99 (49%), Positives = 70/99 (70%)
Frame = +1
Query: 1 TFLYRLTPGSCPKRYGVNVARLAGLPLSVLQKAAKKSNDFENDNQKGHTATERVISDEKT 180
TFLYRLTPG+CPK YGVNVARLAG+P SVLQ+A +KS+DFE + K H T+ ++
Sbjct: 534 TFLYRLTPGACPKSYGVNVARLAGIPTSVLQRANEKSSDFEANYGKRHKMTKDKHVSAQS 593
Query: 181 NAETTLIKELLSVVETWNLRRDSQAVNLSLLSNIQQRAK 297
+ + I++L +V+ W R + QA ++S+L +Q+RAK
Sbjct: 594 DDVFSAIRDLFCIVKAWPCRPEDQATSISMLREVQKRAK 632
>ref|XP_004956779.1| PREDICTED: DNA mismatch repair protein MSH6-like [Setaria italica]
Length = 1135
Score = 94.7 bits (234), Expect = 1e-17
Identities = 51/103 (49%), Positives = 71/103 (68%), Gaps = 4/103 (3%)
Frame = +1
Query: 1 TFLYRLTPGSCPKRYGVNVARLAGLPLSVLQKAAKKSNDFENDNQKGHTATERVISDEKT 180
TFLYRLTPG+CPK YGVNVARLAG+P SVLQ+A +KSNDFE + K H R+I D+
Sbjct: 1032 TFLYRLTPGACPKSYGVNVARLAGIPASVLQRANEKSNDFEANYGKRH----RMIKDKHA 1087
Query: 181 NAET----TLIKELLSVVETWNLRRDSQAVNLSLLSNIQQRAK 297
+A++ + I++L +V W D QA ++++L +Q+ AK
Sbjct: 1088 SAQSEDKFSAIRDLFRIVNAWPC-PDGQAASINMLREVQKLAK 1129
>gb|AAF35250.1|AF227632_1 mismatch binding protein Mus3 [Zea mays]
Length = 629
Score = 92.8 bits (229), Expect = 4e-17
Identities = 46/99 (46%), Positives = 69/99 (69%)
Frame = +1
Query: 1 TFLYRLTPGSCPKRYGVNVARLAGLPLSVLQKAAKKSNDFENDNQKGHTATERVISDEKT 180
TFLYRLTPG+CPK YGVNVARLAG+P +LQ+A +KS++FE + K H T ++
Sbjct: 531 TFLYRLTPGACPKSYGVNVARLAGIPTKLLQRANEKSSEFEANYGKRHKMTNDKHVSAQS 590
Query: 181 NAETTLIKELLSVVETWNLRRDSQAVNLSLLSNIQQRAK 297
+ + + I++L +V+TW R + Q ++S+L +Q+RAK
Sbjct: 591 DDKFSAIRDLFRIVKTWP-RPEDQEASISMLRKLQKRAK 628
>gb|ACN36611.1| unknown [Zea mays]
Length = 126
Score = 92.8 bits (229), Expect = 4e-17
Identities = 46/99 (46%), Positives = 69/99 (69%)
Frame = +1
Query: 1 TFLYRLTPGSCPKRYGVNVARLAGLPLSVLQKAAKKSNDFENDNQKGHTATERVISDEKT 180
TFLYRLTPG+CPK YGVNVARLAG+P +LQ+A +KS++FE + K H T ++
Sbjct: 28 TFLYRLTPGACPKSYGVNVARLAGIPTKLLQRANEKSSEFEANYGKRHKMTNDKHVSAQS 87
Query: 181 NAETTLIKELLSVVETWNLRRDSQAVNLSLLSNIQQRAK 297
+ + + I++L +V+TW R + Q ++S+L +Q+RAK
Sbjct: 88 DDKFSAIRDLFRIVKTWP-RPEDQEASISMLRKLQKRAK 125
>gb|EMS59892.1| DNA mismatch repair protein Msh6-1 [Triticum urartu]
Length = 626
Score = 90.1 bits (222), Expect = 3e-16
Identities = 53/102 (51%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Frame = +1
Query: 1 TFLYRLTPGSCPKRYGVNVARLAGLPLSVLQKAAKKSNDFENDNQKGHTAT-ERVISDEK 177
TFLYRLT GSCPK YGVNVARLAG+P SVLQ+A +KS DFE + K AT ++ I ++
Sbjct: 527 TFLYRLTAGSCPKSYGVNVARLAGIPASVLQRANEKSIDFEANYGKRRCATKDKAICTQE 586
Query: 178 TNAETTLIKELLSVVETWNLRRDSQAVNLSLLSNIQQRAKSL 303
N T IK+L VV+ N + D QA +LS + +Q RA+ +
Sbjct: 587 DNFAT--IKDLFCVVKAGNHQED-QATSLSRIREVQMRAREI 625
>ref|XP_003576514.1| PREDICTED: DNA mismatch repair protein Msh6-1-like [Brachypodium
distachyon]
Length = 1318
Score = 89.4 bits (220), Expect = 5e-16
Identities = 50/99 (50%), Positives = 64/99 (64%)
Frame = +1
Query: 1 TFLYRLTPGSCPKRYGVNVARLAGLPLSVLQKAAKKSNDFENDNQKGHTATERVISDEKT 180
TFLYRLT GSCPK YGVNVARLAG+P SVLQ+A +KSN+FE + K H AT+
Sbjct: 1215 TFLYRLTAGSCPKSYGVNVARLAGIPASVLQRANQKSNEFEANYGKQHFATKDKFVCALR 1274
Query: 181 NAETTLIKELLSVVETWNLRRDSQAVNLSLLSNIQQRAK 297
IK+L VV+ N ++ Q +LS+L IQ+ A+
Sbjct: 1275 EDNFATIKDLFRVVKAGN-HQEGQVASLSMLREIQKLAR 1312
>dbj|BAK02401.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1331
Score = 88.2 bits (217), Expect = 1e-15
Identities = 51/100 (51%), Positives = 68/100 (68%), Gaps = 1/100 (1%)
Frame = +1
Query: 1 TFLYRLTPGSCPKRYGVNVARLAGLPLSVLQKAAKKSNDFENDNQKGHTAT-ERVISDEK 177
TFLYRLT GSCPK YGVNVARLAG+P SVLQ+A +KS DFE + K AT ++ I ++
Sbjct: 1229 TFLYRLTAGSCPKSYGVNVARLAGIPASVLQRANEKSIDFEANYGKRRCATKDKAICTQE 1288
Query: 178 TNAETTLIKELLSVVETWNLRRDSQAVNLSLLSNIQQRAK 297
N T IK+L +V+ N + D +A +LS + +Q RA+
Sbjct: 1289 DNFAT--IKDLFRIVKAGNHKED-EAASLSRIREVQMRAR 1325
>gb|EMT09462.1| DNA mismatch repair protein Msh6-1 [Aegilops tauschii]
Length = 551
Score = 87.4 bits (215), Expect = 2e-15
Identities = 53/101 (52%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Frame = +1
Query: 1 TFLYRLTPGSCPKRYGVNVARLAGLPLSVLQKAAKKSNDFENDNQKGHTAT-ERVISDEK 177
TFLYRLT GSCPK YGVNVARLAG+P SVLQ+A +KS DFE K AT ++ I ++
Sbjct: 449 TFLYRLTAGSCPKSYGVNVARLAGIPASVLQRANEKSIDFEASYGKRCCATKDKAICTQE 508
Query: 178 TNAETTLIKELLSVVETWNLRRDSQAVNLSLLSNIQQRAKS 300
N T IK+L VV+ N + D QA +LS + +Q RA++
Sbjct: 509 DN--FTTIKDLFRVVKAGNHQGD-QATSLSRIREVQMRARA 546
>gb|EMJ02419.1| hypothetical protein PRUPE_ppa000344mg [Prunus persica]
Length = 1263
Score = 87.4 bits (215), Expect = 2e-15
Identities = 45/101 (44%), Positives = 62/101 (61%)
Frame = +1
Query: 1 TFLYRLTPGSCPKRYGVNVARLAGLPLSVLQKAAKKSNDFENDNQKGHTATERVISDEKT 180
TFLYRLTPG+CPK YGVN+ARLAGLP+SVLQKAA KS +FE K
Sbjct: 1171 TFLYRLTPGACPKSYGVNIARLAGLPISVLQKAAAKSREFEATYGK------------HR 1218
Query: 181 NAETTLIKELLSVVETWNLRRDSQAVNLSLLSNIQQRAKSL 303
A++ + L+S VE W ++++++ L+ + RA+ L
Sbjct: 1219 KADSFFFQRLISAVEKWTSHESAKSIDIDSLTEVWHRARIL 1259
>ref|XP_006661208.1| PREDICTED: DNA mismatch repair protein MSH6-like, partial [Oryza
brachyantha]
Length = 1227
Score = 87.0 bits (214), Expect = 2e-15
Identities = 48/99 (48%), Positives = 68/99 (68%)
Frame = +1
Query: 1 TFLYRLTPGSCPKRYGVNVARLAGLPLSVLQKAAKKSNDFENDNQKGHTATERVISDEKT 180
TFLY+LTPGSCPK YGVNVARLAG+P SVL++A +KS DFE K T+ + +
Sbjct: 1125 TFLYKLTPGSCPKSYGVNVARLAGIPASVLRRANEKSIDFEASYGKRQYITKNKLGCAQE 1184
Query: 181 NAETTLIKELLSVVETWNLRRDSQAVNLSLLSNIQQRAK 297
+ + +IK+L V + + ++D QA +LS+L +Q+RAK
Sbjct: 1185 D-KFAVIKDLFRVAKAMHRQKD-QATSLSMLREVQKRAK 1221
>dbj|BAD36244.1| putative mismatch binding protein Mus3 [Oryza sativa Japonica Group]
gi|51091562|dbj|BAD36299.1| putative mismatch binding
protein Mus3 [Oryza sativa Japonica Group]
Length = 1253
Score = 85.9 bits (211), Expect = 5e-15
Identities = 50/99 (50%), Positives = 66/99 (66%)
Frame = +1
Query: 1 TFLYRLTPGSCPKRYGVNVARLAGLPLSVLQKAAKKSNDFENDNQKGHTATERVISDEKT 180
TFLY+LTPGSCPK YGVNVARLAG+P SVLQ+A +KS+DFE K T+ S +
Sbjct: 1151 TFLYKLTPGSCPKSYGVNVARLAGIPASVLQRANEKSSDFEASYGKRPGITKNKPSCAQE 1210
Query: 181 NAETTLIKELLSVVETWNLRRDSQAVNLSLLSNIQQRAK 297
+ + IK+L VV+ + R D A +L +L +Q+RAK
Sbjct: 1211 D-KFAAIKDLFRVVKAMHHRED-HASSLGMLHEVQKRAK 1247
>gb|EAZ44682.1| hypothetical protein OsJ_29308 [Oryza sativa Japonica Group]
Length = 1293
Score = 85.9 bits (211), Expect = 5e-15
Identities = 50/99 (50%), Positives = 66/99 (66%)
Frame = +1
Query: 1 TFLYRLTPGSCPKRYGVNVARLAGLPLSVLQKAAKKSNDFENDNQKGHTATERVISDEKT 180
TFLY+LTPGSCPK YGVNVARLAG+P SVLQ+A +KS+DFE K T+ S +
Sbjct: 1191 TFLYKLTPGSCPKSYGVNVARLAGIPASVLQRANEKSSDFEASYGKRPGITKNKPSCAQE 1250
Query: 181 NAETTLIKELLSVVETWNLRRDSQAVNLSLLSNIQQRAK 297
+ + IK+L VV+ + R D A +L +L +Q+RAK
Sbjct: 1251 D-KFAAIKDLFRVVKAMHHRED-HASSLGMLHEVQKRAK 1287
>gb|EAZ09056.1| hypothetical protein OsI_31317 [Oryza sativa Indica Group]
Length = 1265
Score = 85.9 bits (211), Expect = 5e-15
Identities = 50/99 (50%), Positives = 66/99 (66%)
Frame = +1
Query: 1 TFLYRLTPGSCPKRYGVNVARLAGLPLSVLQKAAKKSNDFENDNQKGHTATERVISDEKT 180
TFLY+LTPGSCPK YGVNVARLAG+P SVLQ+A +KS+DFE K T+ S +
Sbjct: 1163 TFLYKLTPGSCPKSYGVNVARLAGIPASVLQRANEKSSDFEASYGKRPGITKNKPSCAQE 1222
Query: 181 NAETTLIKELLSVVETWNLRRDSQAVNLSLLSNIQQRAK 297
+ + IK+L VV+ + R D A +L +L +Q+RAK
Sbjct: 1223 D-KFAAIKDLFRVVKAMHHRED-HASSLGMLHEVQKRAK 1259
>ref|XP_006604739.1| PREDICTED: DNA mismatch repair protein MSH6-like [Glycine max]
Length = 1273
Score = 83.2 bits (204), Expect = 3e-14
Identities = 44/102 (43%), Positives = 62/102 (60%)
Frame = +1
Query: 1 TFLYRLTPGSCPKRYGVNVARLAGLPLSVLQKAAKKSNDFENDNQKGHTATERVISDEKT 180
TFLYRLTPG+CPK YGVNVAR+AGLP SVLQKAA KS +FE K R +S
Sbjct: 1174 TFLYRLTPGACPKSYGVNVARIAGLPTSVLQKAAAKSREFEATYGKC-----RKVSTVTN 1228
Query: 181 NAETTLIKELLSVVETWNLRRDSQAVNLSLLSNIQQRAKSLV 306
+ + E+ ++++ N + + + LS +Q +A+ L+
Sbjct: 1229 SPNKNWVDEIAAIIQILNNAATQETICVGSLSELQDKARELM 1270
>emb|CBI36942.3| unnamed protein product [Vitis vinifera]
Length = 1237
Score = 81.6 bits (200), Expect = 1e-13
Identities = 48/104 (46%), Positives = 65/104 (62%), Gaps = 5/104 (4%)
Frame = +1
Query: 1 TFLYRLTPGSCPKRYGVNVARLAGLPLSVLQKAAKKSNDFE---NDNQKGHT--ATERVI 165
TFLYRL PG+CPK YGVNVARLAGLP SVLQKAA KS + E ++KG ER+
Sbjct: 1128 TFLYRLRPGACPKSYGVNVARLAGLPNSVLQKAAAKSREIEGIYGRHRKGSDDGCDERLS 1187
Query: 166 SDEKTNAETTLIKELLSVVETWNLRRDSQAVNLSLLSNIQQRAK 297
S + I+ L++ V + + + ++ S LS++QQRA+
Sbjct: 1188 SQNSEDDVVFFIQSLINGVAKLSYHKSFKDIHASSLSDLQQRAR 1231
>ref|XP_002275930.1| PREDICTED: DNA mismatch repair protein Msh6-1-like [Vitis vinifera]
Length = 1297
Score = 81.6 bits (200), Expect = 1e-13
Identities = 48/104 (46%), Positives = 65/104 (62%), Gaps = 5/104 (4%)
Frame = +1
Query: 1 TFLYRLTPGSCPKRYGVNVARLAGLPLSVLQKAAKKSNDFE---NDNQKGHT--ATERVI 165
TFLYRL PG+CPK YGVNVARLAGLP SVLQKAA KS + E ++KG ER+
Sbjct: 1188 TFLYRLRPGACPKSYGVNVARLAGLPNSVLQKAAAKSREIEGIYGRHRKGSDDGCDERLS 1247
Query: 166 SDEKTNAETTLIKELLSVVETWNLRRDSQAVNLSLLSNIQQRAK 297
S + I+ L++ V + + + ++ S LS++QQRA+
Sbjct: 1248 SQNSEDDVVFFIQSLINGVAKLSYHKSFKDIHASSLSDLQQRAR 1291
>gb|AAT67045.1| DNA mismatch repair protein [Petunia x hybrida]
Length = 1303
Score = 80.9 bits (198), Expect = 2e-13
Identities = 49/103 (47%), Positives = 66/103 (64%), Gaps = 1/103 (0%)
Frame = +1
Query: 1 TFLYRLTPGSCPKRYGVNVARLAGLPLSVLQKAAKKSNDFENDNQKGH-TATERVISDEK 177
TFLYRLTPG+CPK YGVNVARLAGLP VLQKAA KS +FE GH ++ +S
Sbjct: 1202 TFLYRLTPGACPKSYGVNVARLAGLPDDVLQKAAAKSEEFE---MYGHIKQSKENLSGNL 1258
Query: 178 TNAETTLIKELLSVVETWNLRRDSQAVNLSLLSNIQQRAKSLV 306
E L++ L+++V N +++ V L L+ +Q RA+ L+
Sbjct: 1259 MKKEAALVQNLINLV-LENKCDNNEGVVLGELNGLQNRARILL 1300
>gb|EXB28598.1| DNA mismatch repair protein Msh6-1 [Morus notabilis]
Length = 1302
Score = 80.1 bits (196), Expect = 3e-13
Identities = 49/101 (48%), Positives = 60/101 (59%)
Frame = +1
Query: 1 TFLYRLTPGSCPKRYGVNVARLAGLPLSVLQKAAKKSNDFENDNQKGHTATERVISDEKT 180
TFLYRLT G+CPK YGVNVARLAGL SVLQ A KS +FE K E V +
Sbjct: 1198 TFLYRLTAGACPKSYGVNVARLAGLSDSVLQNATAKSREFEAMYGKHKKPPENVYTQSSI 1257
Query: 181 NAETTLIKELLSVVETWNLRRDSQAVNLSLLSNIQQRAKSL 303
LIK+L SVV N R + A ++S L ++Q+ A+ L
Sbjct: 1258 EKMAVLIKKLNSVVA--NSRCEESAESISCLIDLQKEARIL 1296
>ref|XP_004136154.1| PREDICTED: DNA mismatch repair protein MSH6-like [Cucumis sativus]
Length = 1307
Score = 79.7 bits (195), Expect = 4e-13
Identities = 45/103 (43%), Positives = 63/103 (61%), Gaps = 1/103 (0%)
Frame = +1
Query: 1 TFLYRLTPGSCPKRYGVNVARLAGLPLSVLQKAAKKSNDFE-NDNQKGHTATERVISDEK 177
TFLYRLTPG+CPK YGVNVARLAGLP VL +AA KS +FE G + + +
Sbjct: 1202 TFLYRLTPGTCPKSYGVNVARLAGLPNCVLTEAAAKSMEFEVTYGMAGEESEVDLCNQTW 1261
Query: 178 TNAETTLIKELLSVVETWNLRRDSQAVNLSLLSNIQQRAKSLV 306
+ TTLI++L+S+ +++ + L +QQ+A+ LV
Sbjct: 1262 VDDTTTLIQKLISLESAVRCNDETEKNGIGSLKQLQQQARILV 1304
>ref|XP_006349194.1| PREDICTED: DNA mismatch repair protein MSH6-like [Solanum tuberosum]
Length = 1308
Score = 79.0 bits (193), Expect = 6e-13
Identities = 49/103 (47%), Positives = 65/103 (63%), Gaps = 1/103 (0%)
Frame = +1
Query: 1 TFLYRLTPGSCPKRYGVNVARLAGLPLSVLQKAAKKSNDFENDNQKGHT-ATERVISDEK 177
TFLYRLTPG+CPK YGVNVARLAGLP VLQ+AA KS E GH +E S+
Sbjct: 1207 TFLYRLTPGACPKSYGVNVARLAGLPDDVLQRAAAKSEALE---IYGHNKQSEENPSENL 1263
Query: 178 TNAETTLIKELLSVVETWNLRRDSQAVNLSLLSNIQQRAKSLV 306
T TL++ L++++ N D++ V L L+ +Q RA+ L+
Sbjct: 1264 TGKIATLLQNLINLI-VHNKYDDNKGVILGELNGLQNRARILL 1305