BLASTX nr result
ID: Zingiber23_contig00047169
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00047169
(308 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263663.2| PREDICTED: sister chromatid cohesion 1 prote... 75 7e-12
emb|CBI24843.3| unnamed protein product [Vitis vinifera] 75 7e-12
ref|XP_006482841.1| PREDICTED: sister chromatid cohesion 1 prote... 74 3e-11
ref|XP_006439063.1| hypothetical protein CICLE_v100309242mg, par... 74 3e-11
gb|EOX96748.1| Cohesin subunit rad21, putative isoform 1 [Theobr... 73 3e-11
ref|XP_006659986.1| PREDICTED: sister chromatid cohesion 1 prote... 73 4e-11
ref|XP_006845133.1| hypothetical protein AMTR_s00005p00204930 [A... 72 1e-10
ref|XP_003571593.1| PREDICTED: sister chromatid cohesion 1 prote... 71 1e-10
ref|XP_004973133.1| PREDICTED: sister chromatid cohesion 1 prote... 71 2e-10
ref|XP_004150164.1| PREDICTED: sister chromatid cohesion 1 prote... 70 4e-10
ref|NP_001061406.1| Os08g0266700 [Oryza sativa Japonica Group] g... 69 5e-10
gb|EMT29103.1| Sister chromatid cohesion 1 protein 3 [Aegilops t... 69 6e-10
gb|EMT03612.1| Sister chromatid cohesion 1 protein 3 [Aegilops t... 68 1e-09
ref|XP_002444148.1| hypothetical protein SORBIDRAFT_07g009570 [S... 68 1e-09
gb|AAG53668.1| RIX4 [Oryza sativa] 68 1e-09
ref|NP_001159213.1| hypothetical protein [Zea mays] gi|223942693... 67 2e-09
ref|XP_006290264.1| hypothetical protein CARUB_v10016763mg [Caps... 67 2e-09
ref|XP_003598058.1| Sister chromatid cohesion 1 protein [Medicag... 67 2e-09
gb|AAG44843.1|AF281155_1 cohesion family protein SYN3 [Arabidops... 66 4e-09
ref|NP_191514.1| sister chromatid cohesion 1 protein 3 [Arabidop... 66 4e-09
>ref|XP_002263663.2| PREDICTED: sister chromatid cohesion 1 protein 3-like [Vitis
vinifera]
Length = 761
Score = 75.5 bits (184), Expect = 7e-12
Identities = 37/55 (67%), Positives = 42/55 (76%)
Frame = -2
Query: 295 LSLNDILEGKTRRRCAQMFFESLVLKTYGFVDVQQEEAYGDIVISPTPALFATKF 131
LSLN ILEGKTR+ A+MFFE+LVLK YG VDVQQEE YGDI + TP L +F
Sbjct: 707 LSLNKILEGKTRKIAARMFFETLVLKNYGLVDVQQEEPYGDITLKMTPKLSKARF 761
>emb|CBI24843.3| unnamed protein product [Vitis vinifera]
Length = 709
Score = 75.5 bits (184), Expect = 7e-12
Identities = 37/55 (67%), Positives = 42/55 (76%)
Frame = -2
Query: 295 LSLNDILEGKTRRRCAQMFFESLVLKTYGFVDVQQEEAYGDIVISPTPALFATKF 131
LSLN ILEGKTR+ A+MFFE+LVLK YG VDVQQEE YGDI + TP L +F
Sbjct: 655 LSLNKILEGKTRKIAARMFFETLVLKNYGLVDVQQEEPYGDITLKMTPKLSKARF 709
>ref|XP_006482841.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Citrus
sinensis]
Length = 735
Score = 73.6 bits (179), Expect = 3e-11
Identities = 34/53 (64%), Positives = 43/53 (81%)
Frame = -2
Query: 295 LSLNDILEGKTRRRCAQMFFESLVLKTYGFVDVQQEEAYGDIVISPTPALFAT 137
LSLN IL+GKTR+ CA+MFFE+LVLK+YG +DV+QE+ YGDI + TP L T
Sbjct: 681 LSLNKILQGKTRKLCARMFFETLVLKSYGLLDVEQEQPYGDITLKLTPKLSKT 733
>ref|XP_006439063.1| hypothetical protein CICLE_v100309242mg, partial [Citrus
clementina] gi|557541259|gb|ESR52303.1| hypothetical
protein CICLE_v100309242mg, partial [Citrus clementina]
Length = 123
Score = 73.6 bits (179), Expect = 3e-11
Identities = 34/53 (64%), Positives = 43/53 (81%)
Frame = -2
Query: 295 LSLNDILEGKTRRRCAQMFFESLVLKTYGFVDVQQEEAYGDIVISPTPALFAT 137
LSLN IL+GKTR+ CA+MFFE+LVLK+YG +DV+QE+ YGDI + TP L T
Sbjct: 69 LSLNKILQGKTRKLCARMFFETLVLKSYGLLDVEQEQPYGDITLKLTPKLSKT 121
>gb|EOX96748.1| Cohesin subunit rad21, putative isoform 1 [Theobroma cacao]
Length = 677
Score = 73.2 bits (178), Expect = 3e-11
Identities = 35/53 (66%), Positives = 43/53 (81%)
Frame = -2
Query: 304 HGVLSLNDILEGKTRRRCAQMFFESLVLKTYGFVDVQQEEAYGDIVISPTPAL 146
H LSLN ILEGKTR+ CA+MFFE+LVLK+YG VDV+Q++A GDI + TP L
Sbjct: 620 HRDLSLNKILEGKTRKICARMFFETLVLKSYGLVDVRQDDANGDITLKLTPTL 672
>ref|XP_006659986.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Oryza
brachyantha]
Length = 733
Score = 72.8 bits (177), Expect = 4e-11
Identities = 33/56 (58%), Positives = 44/56 (78%)
Frame = -2
Query: 301 GVLSLNDILEGKTRRRCAQMFFESLVLKTYGFVDVQQEEAYGDIVISPTPALFATK 134
G SLN ILEG+ R++ A+MFFE+LVLK+Y ++DVQQ+EAYGDI +S P+L K
Sbjct: 677 GKFSLNKILEGRARKQAARMFFETLVLKSYDYIDVQQDEAYGDIAVSVKPSLSGAK 732
>ref|XP_006845133.1| hypothetical protein AMTR_s00005p00204930 [Amborella trichopoda]
gi|548847646|gb|ERN06808.1| hypothetical protein
AMTR_s00005p00204930 [Amborella trichopoda]
Length = 606
Score = 71.6 bits (174), Expect = 1e-10
Identities = 36/53 (67%), Positives = 43/53 (81%)
Frame = -2
Query: 298 VLSLNDILEGKTRRRCAQMFFESLVLKTYGFVDVQQEEAYGDIVISPTPALFA 140
VLSLND LEGKTRR CA+MFFE LVLK+ G V+VQQE ++GDI++ T AL A
Sbjct: 553 VLSLNDTLEGKTRRECAKMFFEILVLKSSGCVNVQQESSFGDILLFATSALTA 605
>ref|XP_003571593.1| PREDICTED: sister chromatid cohesion 1 protein 2-like [Brachypodium
distachyon]
Length = 677
Score = 71.2 bits (173), Expect = 1e-10
Identities = 34/56 (60%), Positives = 43/56 (76%)
Frame = -2
Query: 301 GVLSLNDILEGKTRRRCAQMFFESLVLKTYGFVDVQQEEAYGDIVISPTPALFATK 134
G SLN ILEG+ R++ A+MFFE+L LK+Y ++DVQQEEAY DI IS P+L A K
Sbjct: 621 GKFSLNSILEGRRRKQAARMFFETLALKSYDYIDVQQEEAYSDIKISVRPSLSAAK 676
>ref|XP_004973133.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Setaria
italica]
Length = 686
Score = 70.9 bits (172), Expect = 2e-10
Identities = 34/56 (60%), Positives = 42/56 (75%)
Frame = -2
Query: 301 GVLSLNDILEGKTRRRCAQMFFESLVLKTYGFVDVQQEEAYGDIVISPTPALFATK 134
G SLN ILEGK R++ A+MFFE+ VLK+Y ++DVQQEE YGDI IS P+L K
Sbjct: 630 GKFSLNKILEGKARKQAARMFFETTVLKSYDYIDVQQEEPYGDIEISVKPSLSTAK 685
>ref|XP_004150164.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Cucumis
sativus]
Length = 908
Score = 69.7 bits (169), Expect = 4e-10
Identities = 32/50 (64%), Positives = 40/50 (80%)
Frame = -2
Query: 295 LSLNDILEGKTRRRCAQMFFESLVLKTYGFVDVQQEEAYGDIVISPTPAL 146
LSLN ILEGK R+ CA+MF+E+LVLK+YG +DVQQ+ YGDI + TP L
Sbjct: 854 LSLNGILEGKRRKLCARMFYETLVLKSYGLIDVQQDVPYGDITLKLTPKL 903
>ref|NP_001061406.1| Os08g0266700 [Oryza sativa Japonica Group]
gi|37806398|dbj|BAC99936.1| unknown protein [Oryza
sativa Japonica Group] gi|113623375|dbj|BAF23320.1|
Os08g0266700 [Oryza sativa Japonica Group]
gi|133925837|gb|ABO43671.1| RIX4-4 [Oryza sativa
Japonica Group] gi|215715232|dbj|BAG94983.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|222640231|gb|EEE68363.1| hypothetical protein
OsJ_26669 [Oryza sativa Japonica Group]
Length = 728
Score = 69.3 bits (168), Expect = 5e-10
Identities = 32/57 (56%), Positives = 43/57 (75%)
Frame = -2
Query: 301 GVLSLNDILEGKTRRRCAQMFFESLVLKTYGFVDVQQEEAYGDIVISPTPALFATKF 131
G LN ILEG+ R++ A+MFFE+LVLK+Y ++DV+QE AYGDI +S P+L KF
Sbjct: 672 GKFILNRILEGRHRKQAARMFFETLVLKSYDYIDVEQEAAYGDIAVSVKPSLSGAKF 728
>gb|EMT29103.1| Sister chromatid cohesion 1 protein 3 [Aegilops tauschii]
Length = 626
Score = 68.9 bits (167), Expect = 6e-10
Identities = 31/56 (55%), Positives = 43/56 (76%)
Frame = -2
Query: 301 GVLSLNDILEGKTRRRCAQMFFESLVLKTYGFVDVQQEEAYGDIVISPTPALFATK 134
G SLN IL+G+T+++ A MFFE+L LK+Y ++DV QEEAYGDI +S P+L + K
Sbjct: 570 GKFSLNRILDGRTKKQAASMFFETLALKSYDYIDVHQEEAYGDISVSVRPSLSSAK 625
>gb|EMT03612.1| Sister chromatid cohesion 1 protein 3 [Aegilops tauschii]
Length = 651
Score = 68.2 bits (165), Expect = 1e-09
Identities = 31/58 (53%), Positives = 44/58 (75%)
Frame = -2
Query: 307 EHGVLSLNDILEGKTRRRCAQMFFESLVLKTYGFVDVQQEEAYGDIVISPTPALFATK 134
+ G SL+ IL+G+TR++ A MFFE+L LK+Y ++DV QEEAYGDI +S P+L + K
Sbjct: 593 QRGKFSLSIILDGRTRKQAASMFFETLALKSYDYIDVYQEEAYGDISVSVRPSLSSAK 650
>ref|XP_002444148.1| hypothetical protein SORBIDRAFT_07g009570 [Sorghum bicolor]
gi|241940498|gb|EES13643.1| hypothetical protein
SORBIDRAFT_07g009570 [Sorghum bicolor]
Length = 687
Score = 68.2 bits (165), Expect = 1e-09
Identities = 35/57 (61%), Positives = 44/57 (77%), Gaps = 1/57 (1%)
Frame = -2
Query: 301 GVLSLNDILEGKTRRRCAQMFFESLVLKTYGFVDVQQ-EEAYGDIVISPTPALFATK 134
G SLN ILEGKTR++ A+MFFE+ VLK+Y ++DVQQ EE +GDI IS P+L A K
Sbjct: 630 GKFSLNKILEGKTRKQAARMFFETTVLKSYDYIDVQQAEEPFGDIEISVKPSLSAAK 686
>gb|AAG53668.1| RIX4 [Oryza sativa]
Length = 528
Score = 67.8 bits (164), Expect = 1e-09
Identities = 31/57 (54%), Positives = 43/57 (75%)
Frame = -2
Query: 301 GVLSLNDILEGKTRRRCAQMFFESLVLKTYGFVDVQQEEAYGDIVISPTPALFATKF 131
G LN ILEG+ R++ A+MFFE+LVLK+Y ++DV+QE AYGDI +S P+L +F
Sbjct: 448 GKFILNRILEGRHRKQAARMFFETLVLKSYDYIDVEQEAAYGDIAVSVKPSLSGAQF 504
>ref|NP_001159213.1| hypothetical protein [Zea mays] gi|223942693|gb|ACN25430.1| unknown
[Zea mays] gi|413916835|gb|AFW56767.1| hypothetical
protein ZEAMMB73_164241 [Zea mays]
Length = 627
Score = 67.4 bits (163), Expect = 2e-09
Identities = 33/56 (58%), Positives = 41/56 (73%)
Frame = -2
Query: 301 GVLSLNDILEGKTRRRCAQMFFESLVLKTYGFVDVQQEEAYGDIVISPTPALFATK 134
G SLN ILEGKTR++ A+MFFE+ VLK+Y ++DVQQE+ YG I I P L A K
Sbjct: 570 GKFSLNKILEGKTRKQAARMFFETTVLKSYNYIDVQQEDPYGAIEILVKPLLSAAK 625
>ref|XP_006290264.1| hypothetical protein CARUB_v10016763mg [Capsella rubella]
gi|482558971|gb|EOA23162.1| hypothetical protein
CARUB_v10016763mg [Capsella rubella]
Length = 702
Score = 67.0 bits (162), Expect = 2e-09
Identities = 32/54 (59%), Positives = 43/54 (79%)
Frame = -2
Query: 301 GVLSLNDILEGKTRRRCAQMFFESLVLKTYGFVDVQQEEAYGDIVISPTPALFA 140
G LSL+DIL GKTR+ A+MFFE+LVLK+ G +D+QQ++ YGDI + PALF+
Sbjct: 645 GDLSLSDILAGKTRKLAARMFFETLVLKSRGLIDMQQDKPYGDIGLKLMPALFS 698
>ref|XP_003598058.1| Sister chromatid cohesion 1 protein [Medicago truncatula]
gi|355487106|gb|AES68309.1| Sister chromatid cohesion 1
protein [Medicago truncatula]
Length = 737
Score = 67.0 bits (162), Expect = 2e-09
Identities = 34/53 (64%), Positives = 39/53 (73%)
Frame = -2
Query: 292 SLNDILEGKTRRRCAQMFFESLVLKTYGFVDVQQEEAYGDIVISPTPALFATK 134
SLN IL+GKTR+ A+MFFE LVLKT+ +DVQQEE YGDI TPAL K
Sbjct: 684 SLNKILDGKTRKIAARMFFEVLVLKTHDLIDVQQEEPYGDISFKLTPALDKAK 736
>gb|AAG44843.1|AF281155_1 cohesion family protein SYN3 [Arabidopsis thaliana]
Length = 692
Score = 66.2 bits (160), Expect = 4e-09
Identities = 31/54 (57%), Positives = 42/54 (77%)
Frame = -2
Query: 301 GVLSLNDILEGKTRRRCAQMFFESLVLKTYGFVDVQQEEAYGDIVISPTPALFA 140
G LSL++IL GKTR+ A+MFFE+LVLK+ G +D+QQ+ YGDI + PALF+
Sbjct: 635 GDLSLSEILAGKTRKLAARMFFETLVLKSRGLIDMQQDRPYGDIALKLMPALFS 688
>ref|NP_191514.1| sister chromatid cohesion 1 protein 3 [Arabidopsis thaliana]
gi|30913284|sp|Q9FQ19.2|SCC13_ARATH RecName: Full=Sister
chromatid cohesion 1 protein 3; AltName: Full=SCC1
homolog 3; Short=AtRAD21-2
gi|18157647|gb|AAL62059.1|AF400128_1 RAD21-2
[Arabidopsis thaliana] gi|6996291|emb|CAB75452.1|
putative protein [Arabidopsis thaliana]
gi|332646418|gb|AEE79939.1| sister chromatid cohesion 1
protein 3 [Arabidopsis thaliana]
Length = 693
Score = 66.2 bits (160), Expect = 4e-09
Identities = 31/54 (57%), Positives = 42/54 (77%)
Frame = -2
Query: 301 GVLSLNDILEGKTRRRCAQMFFESLVLKTYGFVDVQQEEAYGDIVISPTPALFA 140
G LSL++IL GKTR+ A+MFFE+LVLK+ G +D+QQ+ YGDI + PALF+
Sbjct: 636 GDLSLSEILAGKTRKLAARMFFETLVLKSRGLIDMQQDRPYGDIALKLMPALFS 689