BLASTX nr result
ID: Zingiber23_contig00047139
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00047139
(235 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003539637.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 87 2e-15
ref|XP_003537982.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 87 2e-15
ref|XP_006846282.1| hypothetical protein AMTR_s00012p00250160 [A... 83 4e-14
ref|XP_004302753.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 81 2e-13
ref|XP_006346709.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 80 2e-13
ref|NP_001054437.2| Os05g0110000 [Oryza sativa Japonica Group] g... 80 3e-13
gb|AAK73147.1|AC079022_20 putative RING-H2 finger protein [Oryza... 80 3e-13
gb|ESW04040.1| hypothetical protein PHAVU_011G062400g [Phaseolus... 80 4e-13
ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 79 6e-13
emb|CAN72193.1| hypothetical protein VITISV_022309 [Vitis vinifera] 79 6e-13
gb|EOY07471.1| Zinc finger family protein, putative [Theobroma c... 79 8e-13
gb|EMJ06640.1| hypothetical protein PRUPE_ppa007829mg [Prunus pe... 79 8e-13
gb|EAY77601.1| hypothetical protein OsI_32642 [Oryza sativa Indi... 79 8e-13
ref|XP_006435652.1| hypothetical protein CICLE_v10031679mg [Citr... 78 1e-12
ref|XP_006435651.1| hypothetical protein CICLE_v10031679mg [Citr... 78 1e-12
gb|AAM23237.1|AC092553_3 Putative RING-H2 finger protein [Oryza ... 78 1e-12
gb|EAZ15189.1| hypothetical protein OsJ_30608 [Oryza sativa Japo... 78 1e-12
gb|ESW35419.1| hypothetical protein PHAVU_001G233700g [Phaseolus... 78 1e-12
ref|XP_002315214.2| hypothetical protein POPTR_0010s20890g, part... 78 1e-12
ref|XP_004161919.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 78 1e-12
>ref|XP_003539637.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
Length = 361
Score = 87.0 bits (214), Expect = 2e-15
Identities = 39/72 (54%), Positives = 52/72 (72%)
Frame = -2
Query: 216 FRSNSRPSTSDRSPFNPLIVLLGPGGSRRDADRDTINSFEMYHYDGTGSGLRPLPENMSD 37
FR R +RSPFNP+IVL GPG AD D ++FE+++ DG G+GLRPLP MS+
Sbjct: 69 FRRRRREGAGNRSPFNPVIVLRGPGDDSAAADHDGASTFELFYDDGDGTGLRPLPPTMSE 128
Query: 36 FLIGSGFERILD 1
FL+GSGF+R+L+
Sbjct: 129 FLLGSGFDRLLE 140
>ref|XP_003537982.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
Length = 361
Score = 87.0 bits (214), Expect = 2e-15
Identities = 38/72 (52%), Positives = 54/72 (75%)
Frame = -2
Query: 216 FRSNSRPSTSDRSPFNPLIVLLGPGGSRRDADRDTINSFEMYHYDGTGSGLRPLPENMSD 37
FR R ++ +RSPFNP+IVL GPG AD D +++FE+++ DG G+GLRPLP MS+
Sbjct: 71 FRRRRREASGNRSPFNPVIVLRGPGDDSAAADHDGVSTFELFYDDGDGTGLRPLPPTMSE 130
Query: 36 FLIGSGFERILD 1
L+GSGF+R+L+
Sbjct: 131 LLLGSGFDRLLE 142
>ref|XP_006846282.1| hypothetical protein AMTR_s00012p00250160 [Amborella trichopoda]
gi|548849052|gb|ERN07957.1| hypothetical protein
AMTR_s00012p00250160 [Amborella trichopoda]
Length = 399
Score = 82.8 bits (203), Expect = 4e-14
Identities = 44/77 (57%), Positives = 54/77 (70%)
Frame = -2
Query: 231 HSGIRFRSNSRPSTSDRSPFNPLIVLLGPGGSRRDADRDTINSFEMYHYDGTGSGLRPLP 52
HS R RS + +DR+PFNP+IVL GP A+ SFE+Y+ DG GSGLRPLP
Sbjct: 69 HSEPRRRSRTN---ADRTPFNPVIVLRGPSDGADGAEN---GSFELYYDDGVGSGLRPLP 122
Query: 51 ENMSDFLIGSGFERILD 1
+MSDFL+GSGFER+LD
Sbjct: 123 TSMSDFLMGSGFERLLD 139
>ref|XP_004302753.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Fragaria vesca
subsp. vesca]
Length = 373
Score = 80.9 bits (198), Expect = 2e-13
Identities = 39/67 (58%), Positives = 49/67 (73%)
Frame = -2
Query: 204 SRPSTSDRSPFNPLIVLLGPGGSRRDADRDTINSFEMYHYDGTGSGLRPLPENMSDFLIG 25
S+ S+ DRSPFNP+IVL GP S A +FE+Y+ DG G GLRPLP +MSDFL+G
Sbjct: 73 SQRSSRDRSPFNPVIVLRGPPDSGAPATETDPGTFELYYDDGAGLGLRPLPSSMSDFLMG 132
Query: 24 SGFERIL 4
SGF+R+L
Sbjct: 133 SGFDRLL 139
>ref|XP_006346709.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform X1
[Solanum tuberosum]
Length = 394
Score = 80.5 bits (197), Expect = 2e-13
Identities = 40/71 (56%), Positives = 52/71 (73%), Gaps = 3/71 (4%)
Frame = -2
Query: 204 SRPSTSDRSPFNPLIVLLGP---GGSRRDADRDTINSFEMYHYDGTGSGLRPLPENMSDF 34
+R +T DRSPFNP+IVL G GG+ + FE+Y+ DGTGSGLRPLP +MS+F
Sbjct: 82 NRRNTGDRSPFNPVIVLRGSTNGGGAGGEGGGGGGGGFELYYDDGTGSGLRPLPTSMSEF 141
Query: 33 LIGSGFERILD 1
L+GSGF+R+LD
Sbjct: 142 LLGSGFDRLLD 152
>ref|NP_001054437.2| Os05g0110000 [Oryza sativa Japonica Group]
gi|52353630|gb|AAU44196.1| putative ring-H2 finger
protein [Oryza sativa Japonica Group]
gi|255675945|dbj|BAF16351.2| Os05g0110000 [Oryza sativa
Japonica Group]
Length = 333
Score = 80.1 bits (196), Expect = 3e-13
Identities = 40/72 (55%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Frame = -2
Query: 213 RSNSRPSTSDRSPFNPLIVLL-GPGGSRRDADRDTINSFEMYHYDGTGSGLRPLPENMSD 37
R+ + + DRSPFNP+IVL P + D SFE+++ DG GSGLRPLPE MSD
Sbjct: 29 RAAAAAAAGDRSPFNPVIVLRRSPAAAGDDDSLAAATSFELFYDDGAGSGLRPLPETMSD 88
Query: 36 FLIGSGFERILD 1
FL+GSGFER+LD
Sbjct: 89 FLMGSGFERLLD 100
>gb|AAK73147.1|AC079022_20 putative RING-H2 finger protein [Oryza sativa]
Length = 386
Score = 80.1 bits (196), Expect = 3e-13
Identities = 40/72 (55%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Frame = -2
Query: 213 RSNSRPSTSDRSPFNPLIVLL-GPGGSRRDADRDTINSFEMYHYDGTGSGLRPLPENMSD 37
R+ + + DRSPFNP+IVL P + D SFE+++ DG GSGLRPLPE MSD
Sbjct: 82 RAAAAAAAGDRSPFNPVIVLRRSPAAAGDDDSLAAATSFELFYDDGAGSGLRPLPETMSD 141
Query: 36 FLIGSGFERILD 1
FL+GSGFER+LD
Sbjct: 142 FLMGSGFERLLD 153
>gb|ESW04040.1| hypothetical protein PHAVU_011G062400g [Phaseolus vulgaris]
Length = 353
Score = 79.7 bits (195), Expect = 4e-13
Identities = 37/71 (52%), Positives = 52/71 (73%)
Frame = -2
Query: 213 RSNSRPSTSDRSPFNPLIVLLGPGGSRRDADRDTINSFEMYHYDGTGSGLRPLPENMSDF 34
R R + +RSPFNP+IVL GPG A+ D ++FE+++ DG G+GLRPLP MS+F
Sbjct: 68 RRRRRDAAGNRSPFNPVIVLRGPGDDSA-AEHDGASTFELFYDDGDGTGLRPLPPTMSEF 126
Query: 33 LIGSGFERILD 1
L+GSGF+R+L+
Sbjct: 127 LLGSGFDRLLE 137
>ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
Length = 388
Score = 79.0 bits (193), Expect = 6e-13
Identities = 41/72 (56%), Positives = 52/72 (72%), Gaps = 4/72 (5%)
Frame = -2
Query: 204 SRPSTSDRSPFNPLIVLLGP----GGSRRDADRDTINSFEMYHYDGTGSGLRPLPENMSD 37
SR + DRSPFNP+IVL GP GG +R +SFE+Y+ DG GSGLRPLP MS+
Sbjct: 78 SRRNAGDRSPFNPVIVLRGPADGGGGEGGVVER---SSFELYYDDGAGSGLRPLPATMSE 134
Query: 36 FLIGSGFERILD 1
FL+GSGF+R+L+
Sbjct: 135 FLMGSGFDRLLE 146
>emb|CAN72193.1| hypothetical protein VITISV_022309 [Vitis vinifera]
Length = 1218
Score = 79.0 bits (193), Expect = 6e-13
Identities = 41/72 (56%), Positives = 52/72 (72%), Gaps = 4/72 (5%)
Frame = -2
Query: 204 SRPSTSDRSPFNPLIVLLGP----GGSRRDADRDTINSFEMYHYDGTGSGLRPLPENMSD 37
SR + DRSPFNP+IVL GP GG +R +SFE+Y+ DG GSGLRPLP MS+
Sbjct: 188 SRRNAGDRSPFNPVIVLRGPADGGGGEGGVVER---SSFELYYDDGAGSGLRPLPATMSE 244
Query: 36 FLIGSGFERILD 1
FL+GSGF+R+L+
Sbjct: 245 FLMGSGFDRLLE 256
>gb|EOY07471.1| Zinc finger family protein, putative [Theobroma cacao]
Length = 369
Score = 78.6 bits (192), Expect = 8e-13
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Frame = -2
Query: 219 RFRSNSRPSTSDRSPFNPLIVLLGPGGSRRDADRDT-INSFEMYHYDGTGSGLRPLPENM 43
RFR +R + DRSPFNP++VL GP + N+FE+Y+ DG+GSGLRPLP M
Sbjct: 76 RFR-RARRNAGDRSPFNPVVVLRGPTSETDGVVPERGNNNFELYYDDGSGSGLRPLPARM 134
Query: 42 SDFLIGSGFERILD 1
S+FL+GSGF+R+LD
Sbjct: 135 SEFLMGSGFDRLLD 148
>gb|EMJ06640.1| hypothetical protein PRUPE_ppa007829mg [Prunus persica]
Length = 354
Score = 78.6 bits (192), Expect = 8e-13
Identities = 39/67 (58%), Positives = 49/67 (73%)
Frame = -2
Query: 204 SRPSTSDRSPFNPLIVLLGPGGSRRDADRDTINSFEMYHYDGTGSGLRPLPENMSDFLIG 25
S+ S+ DRSPFNP+IVL GP + D SFE+Y+ DG G GLRPLP +MSDFL+G
Sbjct: 77 SQRSSRDRSPFNPVIVLRGPPDTESDP-----GSFELYYDDGAGLGLRPLPSSMSDFLMG 131
Query: 24 SGFERIL 4
SGF+R+L
Sbjct: 132 SGFDRLL 138
>gb|EAY77601.1| hypothetical protein OsI_32642 [Oryza sativa Indica Group]
Length = 226
Score = 78.6 bits (192), Expect = 8e-13
Identities = 39/73 (53%), Positives = 51/73 (69%), Gaps = 3/73 (4%)
Frame = -2
Query: 210 SNSRPSTSDRSPFNPLIVLLGPGGSRRDADRD---TINSFEMYHYDGTGSGLRPLPENMS 40
+++ + DRSPFNP+IVL + D D T+ SFE+++ DG GSGLRPLPE MS
Sbjct: 86 ADAAAAADDRSPFNPVIVLCRSPAAVAAGDDDSLATVTSFELFYDDGVGSGLRPLPETMS 145
Query: 39 DFLIGSGFERILD 1
DFL+GS FER+LD
Sbjct: 146 DFLMGSAFERLLD 158
>ref|XP_006435652.1| hypothetical protein CICLE_v10031679mg [Citrus clementina]
gi|557537848|gb|ESR48892.1| hypothetical protein
CICLE_v10031679mg [Citrus clementina]
Length = 401
Score = 78.2 bits (191), Expect = 1e-12
Identities = 39/68 (57%), Positives = 51/68 (75%)
Frame = -2
Query: 204 SRPSTSDRSPFNPLIVLLGPGGSRRDADRDTINSFEMYHYDGTGSGLRPLPENMSDFLIG 25
SR + DRSPFNP+IVL GP D D + N +E+Y+ DG GSGLRPLP +M++FL+G
Sbjct: 108 SRRTGGDRSPFNPVIVLRGPVNG--DVDNNG-NGYELYYDDGEGSGLRPLPRSMTEFLLG 164
Query: 24 SGFERILD 1
SGFER+L+
Sbjct: 165 SGFERLLE 172
>ref|XP_006435651.1| hypothetical protein CICLE_v10031679mg [Citrus clementina]
gi|568866074|ref|XP_006486389.1| PREDICTED: E3
ubiquitin-protein ligase RING1-like [Citrus sinensis]
gi|557537847|gb|ESR48891.1| hypothetical protein
CICLE_v10031679mg [Citrus clementina]
Length = 411
Score = 78.2 bits (191), Expect = 1e-12
Identities = 39/68 (57%), Positives = 51/68 (75%)
Frame = -2
Query: 204 SRPSTSDRSPFNPLIVLLGPGGSRRDADRDTINSFEMYHYDGTGSGLRPLPENMSDFLIG 25
SR + DRSPFNP+IVL GP D D + N +E+Y+ DG GSGLRPLP +M++FL+G
Sbjct: 108 SRRTGGDRSPFNPVIVLRGPVNG--DVDNNG-NGYELYYDDGEGSGLRPLPRSMTEFLLG 164
Query: 24 SGFERILD 1
SGFER+L+
Sbjct: 165 SGFERLLE 172
>gb|AAM23237.1|AC092553_3 Putative RING-H2 finger protein [Oryza sativa Japonica Group]
gi|31429998|gb|AAP51975.1| zinc finger family protein,
putative [Oryza sativa Japonica Group]
Length = 217
Score = 78.2 bits (191), Expect = 1e-12
Identities = 39/68 (57%), Positives = 48/68 (70%), Gaps = 3/68 (4%)
Frame = -2
Query: 195 STSDRSPFNPLIVLLGPGGSRRDADRD---TINSFEMYHYDGTGSGLRPLPENMSDFLIG 25
+ DRSPFNP+IVL + D D T+ SFE+++ DG GSGLRPLPE MSDFL+G
Sbjct: 91 AADDRSPFNPVIVLCRSPAAVAAGDDDSLATVTSFELFYDDGVGSGLRPLPETMSDFLMG 150
Query: 24 SGFERILD 1
S FER+LD
Sbjct: 151 SAFERLLD 158
>gb|EAZ15189.1| hypothetical protein OsJ_30608 [Oryza sativa Japonica Group]
Length = 226
Score = 78.2 bits (191), Expect = 1e-12
Identities = 39/68 (57%), Positives = 48/68 (70%), Gaps = 3/68 (4%)
Frame = -2
Query: 195 STSDRSPFNPLIVLLGPGGSRRDADRD---TINSFEMYHYDGTGSGLRPLPENMSDFLIG 25
+ DRSPFNP+IVL + D D T+ SFE+++ DG GSGLRPLPE MSDFL+G
Sbjct: 91 AADDRSPFNPVIVLCRSPAAVAAGDDDSLATVTSFELFYDDGVGSGLRPLPETMSDFLMG 150
Query: 24 SGFERILD 1
S FER+LD
Sbjct: 151 SAFERLLD 158
>gb|ESW35419.1| hypothetical protein PHAVU_001G233700g [Phaseolus vulgaris]
Length = 386
Score = 77.8 bits (190), Expect = 1e-12
Identities = 35/68 (51%), Positives = 49/68 (72%)
Frame = -2
Query: 204 SRPSTSDRSPFNPLIVLLGPGGSRRDADRDTINSFEMYHYDGTGSGLRPLPENMSDFLIG 25
+R + DRSPFNP+IVL G + + D FE+++ DG GSGLRPLP +MS+FL+G
Sbjct: 80 TRRNGGDRSPFNPVIVLRGGAAATSASSEDESRGFELFYDDGAGSGLRPLPPSMSEFLLG 139
Query: 24 SGFERILD 1
SGF+R+L+
Sbjct: 140 SGFDRLLE 147
>ref|XP_002315214.2| hypothetical protein POPTR_0010s20890g, partial [Populus
trichocarpa] gi|550330258|gb|EEF01385.2| hypothetical
protein POPTR_0010s20890g, partial [Populus trichocarpa]
Length = 465
Score = 77.8 bits (190), Expect = 1e-12
Identities = 42/78 (53%), Positives = 51/78 (65%), Gaps = 5/78 (6%)
Frame = -2
Query: 219 RFRSNSRPSTSDRSPFNPLIVLLG-PGGSRRDADRDTIN----SFEMYHYDGTGSGLRPL 55
R R + DRSP NP+IVL G PGG+ D D FE+Y+ DG GSGLRPL
Sbjct: 77 RNRRGGAAGSGDRSPINPVIVLRGGPGGAAEDVVGDDGGRGGGGFELYYDDGGGSGLRPL 136
Query: 54 PENMSDFLIGSGFERILD 1
P +MS+FL+GSGFER+LD
Sbjct: 137 PPSMSEFLLGSGFERLLD 154
>ref|XP_004161919.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
Length = 380
Score = 77.8 bits (190), Expect = 1e-12
Identities = 43/77 (55%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Frame = -2
Query: 228 SGIRFRSNSRPSTSDRSPFNPLIVLLGPG-GSRRDADRDTINSFEMYHYDGTGSGLRPLP 52
SG+R SR + DRSPFNP+IVL GP GS R FE+Y+ DG GSGLRPLP
Sbjct: 74 SGLR---RSRRNGGDRSPFNPVIVLRGPSDGSEAGESR----RFELYYDDGGGSGLRPLP 126
Query: 51 ENMSDFLIGSGFERILD 1
+MS+FL+GSGF+R+L+
Sbjct: 127 PSMSEFLLGSGFDRLLE 143