BLASTX nr result
ID: Zingiber23_contig00047065
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00047065
(256 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006645199.1| PREDICTED: endoribonuclease Dicer homolog 3a... 86 7e-15
ref|XP_006645200.1| PREDICTED: endoribonuclease Dicer homolog 3a... 84 2e-14
gb|EEE55857.1| hypothetical protein OsJ_04485 [Oryza sativa Japo... 84 2e-14
gb|EEC72002.1| hypothetical protein OsI_04862 [Oryza sativa Indi... 84 2e-14
ref|NP_001045148.1| Os01g0909200 [Oryza sativa Japonica Group] g... 84 2e-14
ref|XP_002458957.1| hypothetical protein SORBIDRAFT_03g043355 [S... 82 1e-13
ref|XP_006578101.1| PREDICTED: endoribonuclease Dicer homolog 3a... 81 2e-13
ref|XP_006578100.1| PREDICTED: endoribonuclease Dicer homolog 3a... 81 2e-13
ref|XP_006578099.1| PREDICTED: endoribonuclease Dicer homolog 3a... 81 2e-13
ref|XP_004970995.1| PREDICTED: LOW QUALITY PROTEIN: endoribonucl... 81 2e-13
tpg|DAA56229.1| TPA: hypothetical protein ZEAMMB73_255524 [Zea m... 80 2e-13
gb|ACN27050.1| unknown [Zea mays] 80 2e-13
gb|AFD22620.1| dicer-like 3 protein, partial [Nicotiana attenuata] 79 5e-13
ref|XP_002467056.1| hypothetical protein SORBIDRAFT_01g018890 [S... 78 1e-12
emb|CAX18338.1| dicel-like 3 [Nicotiana benthamiana] 78 1e-12
gb|EMT13587.1| Endoribonuclease Dicer-3b-like protein [Aegilops ... 78 1e-12
ref|XP_004245201.1| PREDICTED: endoribonuclease Dicer homolog 3a... 78 1e-12
gb|EXB74915.1| Endoribonuclease Dicer-3a-like protein [Morus not... 77 3e-12
ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a... 77 3e-12
emb|CBI20740.3| unnamed protein product [Vitis vinifera] 77 3e-12
>ref|XP_006645199.1| PREDICTED: endoribonuclease Dicer homolog 3a-like isoform X1 [Oryza
brachyantha]
Length = 1654
Score = 85.5 bits (210), Expect = 7e-15
Identities = 41/81 (50%), Positives = 55/81 (67%), Gaps = 6/81 (7%)
Frame = -3
Query: 227 LTVKMTKGGPRMVLYELCKKCKWPMPTFDSKEWKPSELDTCAQSKSHQ------IFVSSI 66
+TVK +KGGPR+ LYELCKK +WPMPT +S++ +PS + + S + F S++
Sbjct: 1549 VTVKTSKGGPRIALYELCKKLQWPMPTMESEKVQPSSVCSSPGGSSQKATPQAFAFASTV 1608
Query: 65 TLHIPNVNVFELTGERRADKK 3
TLHIPN NV TG+ RADKK
Sbjct: 1609 TLHIPNANVISQTGDGRADKK 1629
>ref|XP_006645200.1| PREDICTED: endoribonuclease Dicer homolog 3a-like isoform X2 [Oryza
brachyantha]
Length = 1653
Score = 84.0 bits (206), Expect = 2e-14
Identities = 41/80 (51%), Positives = 53/80 (66%), Gaps = 5/80 (6%)
Frame = -3
Query: 227 LTVKMTKGGPRMVLYELCKKCKWPMPTFDSKEWKPSELDTCAQSKSHQ-----IFVSSIT 63
+TVK +KGGPR+ LYELCKK +WPMPT +S++ +PS + S F S++T
Sbjct: 1549 VTVKTSKGGPRIALYELCKKLQWPMPTMESEKVQPSVCSSPGGSSQKATPQAFAFASTVT 1608
Query: 62 LHIPNVNVFELTGERRADKK 3
LHIPN NV TG+ RADKK
Sbjct: 1609 LHIPNANVISQTGDGRADKK 1628
>gb|EEE55857.1| hypothetical protein OsJ_04485 [Oryza sativa Japonica Group]
Length = 1839
Score = 84.0 bits (206), Expect = 2e-14
Identities = 43/81 (53%), Positives = 55/81 (67%), Gaps = 8/81 (9%)
Frame = -3
Query: 221 VKMTKGGPRMVLYELCKKCKWPMPTFDSKEWKPSELDTC------AQSKSHQ--IFVSSI 66
VK +KGGPR+ LYELCKK +WPMPT +S++ +PS C +Q + Q F S+I
Sbjct: 1480 VKTSKGGPRIALYELCKKLQWPMPTMESEKVQPSFSSVCSSPGGSSQKATPQAFAFASTI 1539
Query: 65 TLHIPNVNVFELTGERRADKK 3
TLHIPN +V LTG+ RADKK
Sbjct: 1540 TLHIPNADVISLTGDGRADKK 1560
>gb|EEC72002.1| hypothetical protein OsI_04862 [Oryza sativa Indica Group]
Length = 1858
Score = 84.0 bits (206), Expect = 2e-14
Identities = 43/81 (53%), Positives = 55/81 (67%), Gaps = 8/81 (9%)
Frame = -3
Query: 221 VKMTKGGPRMVLYELCKKCKWPMPTFDSKEWKPSELDTC------AQSKSHQ--IFVSSI 66
VK +KGGPR+ LYELCKK +WPMPT +S++ +PS C +Q + Q F S+I
Sbjct: 1480 VKTSKGGPRIALYELCKKLQWPMPTMESEKVQPSFSSVCSSPGGSSQKATPQAFAFASTI 1539
Query: 65 TLHIPNVNVFELTGERRADKK 3
TLHIPN +V LTG+ RADKK
Sbjct: 1540 TLHIPNADVISLTGDGRADKK 1560
>ref|NP_001045148.1| Os01g0909200 [Oryza sativa Japonica Group]
gi|75321191|sp|Q5N870.1|DCL3A_ORYSJ RecName:
Full=Endoribonuclease Dicer homolog 3a; AltName:
Full=Dicer-like protein 3a; Short=OsDCL3a
gi|56785369|dbj|BAD82327.1| putative Endoribonuclease
Dicer homolog [Oryza sativa Japonica Group]
gi|113534679|dbj|BAF07062.1| Os01g0909200 [Oryza sativa
Japonica Group]
Length = 1651
Score = 84.0 bits (206), Expect = 2e-14
Identities = 43/81 (53%), Positives = 55/81 (67%), Gaps = 8/81 (9%)
Frame = -3
Query: 221 VKMTKGGPRMVLYELCKKCKWPMPTFDSKEWKPSELDTC------AQSKSHQ--IFVSSI 66
VK +KGGPR+ LYELCKK +WPMPT +S++ +PS C +Q + Q F S+I
Sbjct: 1546 VKTSKGGPRIALYELCKKLQWPMPTMESEKVQPSFSSVCSSPGGSSQKATPQAFAFASTI 1605
Query: 65 TLHIPNVNVFELTGERRADKK 3
TLHIPN +V LTG+ RADKK
Sbjct: 1606 TLHIPNADVISLTGDGRADKK 1626
>ref|XP_002458957.1| hypothetical protein SORBIDRAFT_03g043355 [Sorghum bicolor]
gi|241930932|gb|EES04077.1| hypothetical protein
SORBIDRAFT_03g043355 [Sorghum bicolor]
Length = 1651
Score = 81.6 bits (200), Expect = 1e-13
Identities = 40/84 (47%), Positives = 56/84 (66%), Gaps = 8/84 (9%)
Frame = -3
Query: 230 VLTVKMTKGGPRMVLYELCKKCKWPMPTFDSKEWKPSELDTCAQS--KSHQI------FV 75
V+ VK++KGGPR+ LYE CKK +WPMP F+ + +P + C+ S S ++ F
Sbjct: 1543 VVKVKLSKGGPRVSLYESCKKLQWPMPMFEFVKVEPKNISVCSSSGDSSQKVAPQGYAFA 1602
Query: 74 SSITLHIPNVNVFELTGERRADKK 3
S+ITLHIPN ++ LTG+ RADKK
Sbjct: 1603 STITLHIPNGDIISLTGDGRADKK 1626
>ref|XP_006578101.1| PREDICTED: endoribonuclease Dicer homolog 3a-like isoform X3 [Glycine
max]
Length = 1435
Score = 80.9 bits (198), Expect = 2e-13
Identities = 42/79 (53%), Positives = 51/79 (64%), Gaps = 4/79 (5%)
Frame = -3
Query: 227 LTVKMTKGGPRMVLYELCKKCKWPMPTFDSKEWKPSEL-DTC---AQSKSHQIFVSSITL 60
L++ M KGGPR LYE+CKK +WP+PTFDS E+K L ++C SK FVS ITL
Sbjct: 1329 LSINMKKGGPRTTLYEVCKKLQWPVPTFDSTEYKDRSLFESCEGLQGSKGQNCFVSKITL 1388
Query: 59 HIPNVNVFELTGERRADKK 3
IPN E GE R+DKK
Sbjct: 1389 CIPNYGNIESKGEARSDKK 1407
>ref|XP_006578100.1| PREDICTED: endoribonuclease Dicer homolog 3a-like isoform X2 [Glycine
max]
Length = 1563
Score = 80.9 bits (198), Expect = 2e-13
Identities = 42/79 (53%), Positives = 51/79 (64%), Gaps = 4/79 (5%)
Frame = -3
Query: 227 LTVKMTKGGPRMVLYELCKKCKWPMPTFDSKEWKPSEL-DTC---AQSKSHQIFVSSITL 60
L++ M KGGPR LYE+CKK +WP+PTFDS E+K L ++C SK FVS ITL
Sbjct: 1457 LSINMKKGGPRTTLYEVCKKLQWPVPTFDSTEYKDRSLFESCEGLQGSKGQNCFVSKITL 1516
Query: 59 HIPNVNVFELTGERRADKK 3
IPN E GE R+DKK
Sbjct: 1517 CIPNYGNIESKGEARSDKK 1535
>ref|XP_006578099.1| PREDICTED: endoribonuclease Dicer homolog 3a-like isoform X1 [Glycine
max]
Length = 1674
Score = 80.9 bits (198), Expect = 2e-13
Identities = 42/79 (53%), Positives = 51/79 (64%), Gaps = 4/79 (5%)
Frame = -3
Query: 227 LTVKMTKGGPRMVLYELCKKCKWPMPTFDSKEWKPSEL-DTC---AQSKSHQIFVSSITL 60
L++ M KGGPR LYE+CKK +WP+PTFDS E+K L ++C SK FVS ITL
Sbjct: 1568 LSINMKKGGPRTTLYEVCKKLQWPVPTFDSTEYKDRSLFESCEGLQGSKGQNCFVSKITL 1627
Query: 59 HIPNVNVFELTGERRADKK 3
IPN E GE R+DKK
Sbjct: 1628 CIPNYGNIESKGEARSDKK 1646
>ref|XP_004970995.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer homolog
3a-like [Setaria italica]
Length = 1662
Score = 80.9 bits (198), Expect = 2e-13
Identities = 44/81 (54%), Positives = 55/81 (67%), Gaps = 5/81 (6%)
Frame = -3
Query: 230 VLTVKMTKGGPRMVLYELCKKCKWPMPTFDSKEWKPS---ELDTCAQSKSHQ--IFVSSI 66
V+ VK++KGGPR+ LYE CKK +WPMPTF+ + KPS D +Q + Q F S I
Sbjct: 1557 VVKVKLSKGGPRISLYESCKKLQWPMPTFEYVKVKPSVCPSSDGSSQKAAPQGFAFSSII 1616
Query: 65 TLHIPNVNVFELTGERRADKK 3
TLHIPN +V LTG+ RADKK
Sbjct: 1617 TLHIPNGDVISLTGDGRADKK 1637
>tpg|DAA56229.1| TPA: hypothetical protein ZEAMMB73_255524 [Zea mays]
Length = 595
Score = 80.5 bits (197), Expect = 2e-13
Identities = 42/81 (51%), Positives = 55/81 (67%), Gaps = 5/81 (6%)
Frame = -3
Query: 230 VLTVKMTKGGPRMVLYELCKKCKWPMPTFDSKEWKPSEL-DTCAQSKSHQ----IFVSSI 66
V+ VK++KGGPR+ LYE CKK +WPMPTF+ + +PS +C S+ F S+I
Sbjct: 490 VVKVKLSKGGPRISLYESCKKLQWPMPTFEFVKVEPSVCSSSCGSSQKVAPQGFAFASTI 549
Query: 65 TLHIPNVNVFELTGERRADKK 3
TLHIPN +V LTG+ RADKK
Sbjct: 550 TLHIPNGDVISLTGDGRADKK 570
>gb|ACN27050.1| unknown [Zea mays]
Length = 293
Score = 80.5 bits (197), Expect = 2e-13
Identities = 42/81 (51%), Positives = 55/81 (67%), Gaps = 5/81 (6%)
Frame = -3
Query: 230 VLTVKMTKGGPRMVLYELCKKCKWPMPTFDSKEWKPSEL-DTCAQSKSHQ----IFVSSI 66
V+ VK++KGGPR+ LYE CKK +WPMPTF+ + +PS +C S+ F S+I
Sbjct: 188 VVKVKLSKGGPRISLYESCKKLQWPMPTFEFVKVEPSVCSSSCGSSQKVAPQGFAFASTI 247
Query: 65 TLHIPNVNVFELTGERRADKK 3
TLHIPN +V LTG+ RADKK
Sbjct: 248 TLHIPNGDVISLTGDGRADKK 268
>gb|AFD22620.1| dicer-like 3 protein, partial [Nicotiana attenuata]
Length = 596
Score = 79.3 bits (194), Expect = 5e-13
Identities = 40/85 (47%), Positives = 54/85 (63%), Gaps = 4/85 (4%)
Frame = -3
Query: 245 IKSVGVLTVKMTKGGPRMVLYELCKKCKWPMPTFDSKEWKPSELDTCAQS----KSHQIF 78
I+++G + +K KGGPR LYELCKK +WPMP+ +S E K L C + K + F
Sbjct: 489 IQAIGPINMK--KGGPRQSLYELCKKLQWPMPSLESTERKSKSLTECGEGSDKRKVYNTF 546
Query: 77 VSSITLHIPNVNVFELTGERRADKK 3
S I+L IP+ + ELTG+ RADKK
Sbjct: 547 ASQISLTIPDYGLIELTGDERADKK 571
>ref|XP_002467056.1| hypothetical protein SORBIDRAFT_01g018890 [Sorghum bicolor]
gi|241920910|gb|EER94054.1| hypothetical protein
SORBIDRAFT_01g018890 [Sorghum bicolor]
Length = 1586
Score = 78.2 bits (191), Expect = 1e-12
Identities = 41/85 (48%), Positives = 55/85 (64%), Gaps = 3/85 (3%)
Frame = -3
Query: 248 SIKSVGVLTVKMTKGGPRMVLYELCKKCKWPMPTFDSKEWK---PSELDTCAQSKSHQIF 78
S+++ VL +KM KGGPR L+ LCK+ +WP+P F+ E + P LD + + F
Sbjct: 1468 SVRAAVVLPLKMDKGGPRTALFRLCKRLQWPIPEFEFVEQRFRTPIVLDGVTTTNFNS-F 1526
Query: 77 VSSITLHIPNVNVFELTGERRADKK 3
VS+ITLHIP+V V L GERR DKK
Sbjct: 1527 VSTITLHIPDVTVITLQGERRTDKK 1551
>emb|CAX18338.1| dicel-like 3 [Nicotiana benthamiana]
Length = 99
Score = 78.2 bits (191), Expect = 1e-12
Identities = 38/77 (49%), Positives = 48/77 (62%), Gaps = 4/77 (5%)
Frame = -3
Query: 221 VKMTKGGPRMVLYELCKKCKWPMPTFDSKEWKPSELDTCAQS----KSHQIFVSSITLHI 54
+ M KGGPR LYELCKK +WPMP+ +S E K L C + K + F S I+L I
Sbjct: 5 INMKKGGPRQSLYELCKKLQWPMPSLESTERKSKSLVECGEGSDKRKVYNTFASQISLTI 64
Query: 53 PNVNVFELTGERRADKK 3
P+ + ELTG+ RADKK
Sbjct: 65 PDYGLIELTGDERADKK 81
>gb|EMT13587.1| Endoribonuclease Dicer-3b-like protein [Aegilops tauschii]
Length = 1647
Score = 77.8 bits (190), Expect = 1e-12
Identities = 41/85 (48%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Frame = -3
Query: 248 SIKSVGVLTVKMTKGGPRMVLYELCKKCKWPMPTFDSKEWK---PSELDTCAQSKSHQIF 78
S+K VL +K+ KGGPR L++LCK+ +WPMP F+ E + P LD + + F
Sbjct: 1540 SLKEAVVLRLKLDKGGPRSALFKLCKRLQWPMPEFEFVEQRFRTPIVLDGVTTTNFNS-F 1598
Query: 77 VSSITLHIPNVNVFELTGERRADKK 3
VS+ITLHIP+V L GERR DKK
Sbjct: 1599 VSTITLHIPDVTAITLQGERRTDKK 1623
>ref|XP_004245201.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Solanum
lycopersicum]
Length = 1656
Score = 77.8 bits (190), Expect = 1e-12
Identities = 37/77 (48%), Positives = 50/77 (64%), Gaps = 4/77 (5%)
Frame = -3
Query: 221 VKMTKGGPRMVLYELCKKCKWPMPTFDSKEWKPSELDTCAQS----KSHQIFVSSITLHI 54
+ MT+GGPR+ L+ELCKK +WPMP+F+S E L C + K + F S I+L I
Sbjct: 1555 INMTRGGPRISLFELCKKLQWPMPSFESTERTSKSLIECGEGSDKRKVYNTFASRISLTI 1614
Query: 53 PNVNVFELTGERRADKK 3
P+ + ELTG+ RADKK
Sbjct: 1615 PDYGLIELTGDERADKK 1631
>gb|EXB74915.1| Endoribonuclease Dicer-3a-like protein [Morus notabilis]
Length = 1603
Score = 76.6 bits (187), Expect = 3e-12
Identities = 40/77 (51%), Positives = 50/77 (64%), Gaps = 4/77 (5%)
Frame = -3
Query: 221 VKMTKGGPRMVLYELCKKCKWPMPTFDSKEWK---PSELDTCAQSKS-HQIFVSSITLHI 54
+ M KGGPR L++LCKK +WPMPTFDS E K P EL + ++ FVSSI L++
Sbjct: 1502 INMKKGGPRTTLFDLCKKQQWPMPTFDSTETKSRTPVELGEGLERRTGFNSFVSSIVLYV 1561
Query: 53 PNVNVFELTGERRADKK 3
PN E TG+ RADKK
Sbjct: 1562 PNFGNIECTGDARADKK 1578
>ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a-like [Vitis vinifera]
Length = 1648
Score = 76.6 bits (187), Expect = 3e-12
Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 4/80 (5%)
Frame = -3
Query: 230 VLTVKMTKGGPRMVLYELCKKCKWPMPTFDSKEWKPSEL----DTCAQSKSHQIFVSSIT 63
+ ++ M KGGPR LYELCK+ +WPMP+F+SKE + + + + F+SSI+
Sbjct: 1545 IKSINMKKGGPRSSLYELCKRLQWPMPSFESKEQRSRFPIIFGEGSERREGFNSFISSIS 1604
Query: 62 LHIPNVNVFELTGERRADKK 3
LHIPN V E G+ RADKK
Sbjct: 1605 LHIPNCGVMECRGDHRADKK 1624
>emb|CBI20740.3| unnamed protein product [Vitis vinifera]
Length = 1688
Score = 76.6 bits (187), Expect = 3e-12
Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 4/80 (5%)
Frame = -3
Query: 230 VLTVKMTKGGPRMVLYELCKKCKWPMPTFDSKEWKPSEL----DTCAQSKSHQIFVSSIT 63
+ ++ M KGGPR LYELCK+ +WPMP+F+SKE + + + + F+SSI+
Sbjct: 1585 IKSINMKKGGPRSSLYELCKRLQWPMPSFESKEQRSRFPIIFGEGSERREGFNSFISSIS 1644
Query: 62 LHIPNVNVFELTGERRADKK 3
LHIPN V E G+ RADKK
Sbjct: 1645 LHIPNCGVMECRGDHRADKK 1664