BLASTX nr result
ID: Zingiber23_contig00047050
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00047050
(674 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ESW29612.1| hypothetical protein PHAVU_002G084700g [Phaseolus... 213 4e-53
ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containi... 213 6e-53
gb|EMJ28099.1| hypothetical protein PRUPE_ppa016366mg [Prunus pe... 209 5e-52
ref|XP_002466303.1| hypothetical protein SORBIDRAFT_01g005310 [S... 209 8e-52
ref|XP_004981445.1| PREDICTED: pentatricopeptide repeat-containi... 208 1e-51
ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containi... 208 1e-51
ref|XP_006650721.1| PREDICTED: pentatricopeptide repeat-containi... 207 2e-51
ref|XP_004298429.1| PREDICTED: pentatricopeptide repeat-containi... 207 2e-51
ref|XP_006438696.1| hypothetical protein CICLE_v10031011mg [Citr... 204 2e-50
ref|XP_006395744.1| hypothetical protein EUTSA_v10003852mg [Eutr... 204 2e-50
ref|XP_006290747.1| hypothetical protein CARUB_v10016843mg [Caps... 204 3e-50
ref|XP_003557509.1| PREDICTED: pentatricopeptide repeat-containi... 200 3e-49
dbj|BAJ88458.1| predicted protein [Hordeum vulgare subsp. vulgare] 200 3e-49
gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thali... 200 4e-49
ref|NP_178398.1| RNA editing factor OTP85 [Arabidopsis thaliana]... 199 6e-49
ref|NP_001130403.1| uncharacterized protein LOC100191499 [Zea ma... 199 8e-49
gb|EOY01914.1| Pentatricopeptide repeat (PPR) superfamily protei... 198 1e-48
ref|XP_002316137.1| pentatricopeptide repeat-containing family p... 198 1e-48
gb|EAZ28899.1| hypothetical protein OsJ_12939 [Oryza sativa Japo... 197 2e-48
ref|NP_001051546.1| Os03g0795200 [Oryza sativa Japonica Group] g... 197 2e-48
>gb|ESW29612.1| hypothetical protein PHAVU_002G084700g [Phaseolus vulgaris]
Length = 600
Score = 213 bits (542), Expect = 4e-53
Identities = 106/198 (53%), Positives = 143/198 (72%), Gaps = 4/198 (2%)
Frame = -1
Query: 584 LLARCSSLRDLQQLHALAIKYQLHHRPPFVARLIASC---PPSAS-DYARSLFDQIPHPD 417
L+ +C+SLR+L+Q+ A IK LH+ + +LI C P +AS DYA +FDQIP PD
Sbjct: 31 LIPKCTSLRELKQIQAYTIKTHLHNSGTVLTKLINFCTCNPTTASMDYAHQMFDQIPQPD 90
Query: 416 SVLFNVLSRGYARSHHPLRSVSLFAQMLLSGVAPDAYSFPALLKACATARALPEGRQAHA 237
VLFN ++RGYAR PLR++ LF+Q+L SG+ PD Y+F +L KACA +A+ EG+Q H
Sbjct: 91 IVLFNTMARGYARFDDPLRAILLFSQVLFSGLLPDDYTFSSLFKACARLKAIQEGKQLHC 150
Query: 236 AALKLGLADNAYVLPTLISMYAECSDLDAARGVFCREGARCVVSYNSLITACVRSSRPGE 57
A+KLG++ N YV PTLI+MY C+D+DAAR VF + CVV+YN++I++C RSS+P E
Sbjct: 151 LAVKLGVSGNMYVCPTLINMYTACNDMDAARRVFDKIDEPCVVAYNAIISSCARSSQPNE 210
Query: 56 ALALFREMQAKALGPTDV 3
ALALFRE+Q L PTDV
Sbjct: 211 ALALFRELQESGLKPTDV 228
Score = 83.2 bits (204), Expect = 7e-14
Identities = 55/195 (28%), Positives = 94/195 (48%), Gaps = 3/195 (1%)
Frame = -1
Query: 578 ARCSSLRDLQQLHALAIKYQLHHRP---PFVARLIASCPPSASDYARSLFDQIPHPDSVL 408
AR ++++ +QLH LA+K + P + + +C + D AR +FD+I P V
Sbjct: 137 ARLKAIQEGKQLHCLAVKLGVSGNMYVCPTLINMYTAC--NDMDAARRVFDKIDEPCVVA 194
Query: 407 FNVLSRGYARSHHPLRSVSLFAQMLLSGVAPDAYSFPALLKACATARALPEGRQAHAAAL 228
+N + ARS P +++LF ++ SG+ P + L +CA AL G+ H
Sbjct: 195 YNAIISSCARSSQPNEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGKWIHEYVK 254
Query: 227 KLGLADNAYVLPTLISMYAECSDLDAARGVFCREGARCVVSYNSLITACVRSSRPGEALA 48
K G V LI MYA+C L+ A VF R +++++I +AL+
Sbjct: 255 KNGFDKYVKVNTALIDMYAKCGSLEDAVSVFREMPRRDTQAWSAMIVGYATHGHGYQALS 314
Query: 47 LFREMQAKALGPTDV 3
+ EM+ + + P ++
Sbjct: 315 MLEEMKKEKVQPDEI 329
>ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera] gi|296086362|emb|CBI31951.3| unnamed
protein product [Vitis vinifera]
Length = 595
Score = 213 bits (541), Expect = 6e-53
Identities = 109/198 (55%), Positives = 142/198 (71%), Gaps = 4/198 (2%)
Frame = -1
Query: 584 LLARCSSLRDLQQLHALAIKYQLHHRPPFVARLIASC---PPSAS-DYARSLFDQIPHPD 417
LL +C+SLR+L+QL A AIK LH + + I C P + S +A LFDQIP PD
Sbjct: 26 LLPKCTSLRELKQLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQHAHHLFDQIPQPD 85
Query: 416 SVLFNVLSRGYARSHHPLRSVSLFAQMLLSGVAPDAYSFPALLKACATARALPEGRQAHA 237
VLFN ++RGYAR+ PLR+ +LF Q+L SG+ PD Y+FP+LLKACA+ +AL EGRQ H
Sbjct: 86 IVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKALEEGRQLHC 145
Query: 236 AALKLGLADNAYVLPTLISMYAECSDLDAARGVFCREGARCVVSYNSLITACVRSSRPGE 57
A+KLGL++N YV PTLI+MY C+++D AR VF + CVV+YN++IT R SRP E
Sbjct: 146 LAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMITGYARGSRPNE 205
Query: 56 ALALFREMQAKALGPTDV 3
AL+LFRE+QA+ L PTDV
Sbjct: 206 ALSLFRELQARNLKPTDV 223
Score = 90.9 bits (224), Expect = 3e-16
Identities = 61/195 (31%), Positives = 95/195 (48%), Gaps = 3/195 (1%)
Frame = -1
Query: 578 ARCSSLRDLQQLHALAIKYQLHHRP---PFVARLIASCPPSASDYARSLFDQIPHPDSVL 408
A C +L + +QLH LAIK L P + + +C + D AR +FD+I P V
Sbjct: 132 ASCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTAC--NEMDCARRVFDKIWEPCVVT 189
Query: 407 FNVLSRGYARSHHPLRSVSLFAQMLLSGVAPDAYSFPALLKACATARALPEGRQAHAAAL 228
+N + GYAR P ++SLF ++ + P + ++L +CA AL G+ H
Sbjct: 190 YNAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVK 249
Query: 227 KLGLADNAYVLPTLISMYAECSDLDAARGVFCREGARCVVSYNSLITACVRSSRPGEALA 48
K G V LI MYA+C LD A VF R +++++I A +A++
Sbjct: 250 KNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVS 309
Query: 47 LFREMQAKALGPTDV 3
LF+EM+ P ++
Sbjct: 310 LFKEMRKAGTEPDEI 324
>gb|EMJ28099.1| hypothetical protein PRUPE_ppa016366mg [Prunus persica]
Length = 593
Score = 209 bits (533), Expect = 5e-52
Identities = 110/198 (55%), Positives = 141/198 (71%), Gaps = 4/198 (2%)
Frame = -1
Query: 584 LLARCSSLRDLQQLHALAIKYQLHHRPPFVARLIASC---PPSAS-DYARSLFDQIPHPD 417
L+ +C+SLR+L+Q+ A +IK L + + +LI C P S DYA LFDQIPHPD
Sbjct: 24 LIPKCTSLRELKQIQAFSIKTHLQYDISVLTKLINFCTLNPTGTSMDYAHHLFDQIPHPD 83
Query: 416 SVLFNVLSRGYARSHHPLRSVSLFAQMLLSGVAPDAYSFPALLKACATARALPEGRQAHA 237
V+FN ++RGYARSH P R++SLFA +L S + PD Y+F +LLKACA+++AL EGRQ H
Sbjct: 84 IVVFNTMARGYARSHAPFRAISLFAHILSSDLFPDDYTFASLLKACASSKALEEGRQLHC 143
Query: 236 AALKLGLADNAYVLPTLISMYAECSDLDAARGVFCREGARCVVSYNSLITACVRSSRPGE 57
A+K GL N YV PTLI+MY EC+D+DAAR VF + CVV +N++I RSSRP E
Sbjct: 144 FAIKCGLHLNIYVCPTLINMYTECNDVDAARRVFDKIPDPCVVVHNAMIKGYARSSRPNE 203
Query: 56 ALALFREMQAKALGPTDV 3
ALALFRE+QA L PTDV
Sbjct: 204 ALALFRELQASNLKPTDV 221
Score = 92.4 bits (228), Expect = 1e-16
Identities = 62/200 (31%), Positives = 99/200 (49%), Gaps = 6/200 (3%)
Frame = -1
Query: 584 LLARCSSLRDLQ---QLHALAIKYQLH---HRPPFVARLIASCPPSASDYARSLFDQIPH 423
LL C+S + L+ QLH AIK LH + P + + C + D AR +FD+IP
Sbjct: 125 LLKACASSKALEEGRQLHCFAIKCGLHLNIYVCPTLINMYTEC--NDVDAARRVFDKIPD 182
Query: 422 PDSVLFNVLSRGYARSHHPLRSVSLFAQMLLSGVAPDAYSFPALLKACATARALPEGRQA 243
P V+ N + +GYARS P +++LF ++ S + P + + L +CA AL G+
Sbjct: 183 PCVVVHNAMIKGYARSSRPNEALALFRELQASNLKPTDVTMLSALSSCALLGALDLGKWI 242
Query: 242 HAAALKLGLADNAYVLPTLISMYAECSDLDAARGVFCREGARCVVSYNSLITACVRSSRP 63
H K V LI MYA+C L+ A VF + +++++I A
Sbjct: 243 HEYVKKNRFDRYVKVNTALIDMYAKCGSLEDAVSVFEDMSVKDTQAWSAMIVAYATHGNG 302
Query: 62 GEALALFREMQAKALGPTDV 3
+AL++F EM+ + P ++
Sbjct: 303 SKALSMFEEMKKARIRPDEI 322
>ref|XP_002466303.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
gi|241920157|gb|EER93301.1| hypothetical protein
SORBIDRAFT_01g005310 [Sorghum bicolor]
Length = 606
Score = 209 bits (531), Expect = 8e-52
Identities = 117/204 (57%), Positives = 137/204 (67%), Gaps = 11/204 (5%)
Frame = -1
Query: 581 LARCSSLRDLQQLHALAIKYQLHHRPPFVARLIASCP-----PSASDYARSLFDQIPHP- 420
L C+SLR L QLHA A+K L P V RL+ C P+ YAR +FD++PHP
Sbjct: 32 LPHCTSLRTLAQLHAAAVKAGLAAHPALVTRLLTLCTGPDAGPAHLAYARQVFDRVPHPA 91
Query: 419 DSVLFNVLSRGYARSHHPLRS-----VSLFAQMLLSGVAPDAYSFPALLKACATARALPE 255
D+V +N L RGYARS +P S V +F +ML GVAPD Y+F +LLKACA ARA E
Sbjct: 92 DAVWYNTLLRGYARSSNPSSSEAAAAVRVFVRMLEEGVAPDTYTFVSLLKACAAARAGEE 151
Query: 254 GRQAHAAALKLGLADNAYVLPTLISMYAECSDLDAARGVFCREGARCVVSYNSLITACVR 75
GRQAHA A+KLG AD+ YV PTLI+MYAEC D AAR +F CVVSYN++I A VR
Sbjct: 152 GRQAHALAVKLGAADHDYVRPTLINMYAECGDARAARVMFGGTDGGCVVSYNAMIAAAVR 211
Query: 74 SSRPGEALALFREMQAKALGPTDV 3
SSRPGEAL LFREMQ K L PT V
Sbjct: 212 SSRPGEALVLFREMQGKGLKPTSV 235
Score = 78.2 bits (191), Expect = 2e-12
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 6/200 (3%)
Frame = -1
Query: 584 LLARCSSLR---DLQQLHALAIKYQLHHRP---PFVARLIASCPPSASDYARSLFDQIPH 423
LL C++ R + +Q HALA+K P + + A C + + AR +F
Sbjct: 139 LLKACAAARAGEEGRQAHALAVKLGAADHDYVRPTLINMYAECGDARA--ARVMFGGTDG 196
Query: 422 PDSVLFNVLSRGYARSHHPLRSVSLFAQMLLSGVAPDAYSFPALLKACATARALPEGRQA 243
V +N + RS P ++ LF +M G+ P + + ++L ACA AL GR
Sbjct: 197 GCVVSYNAMIAAAVRSSRPGEALVLFREMQGKGLKPTSVTVISVLSACALLGALELGRWV 256
Query: 242 HAAALKLGLADNAYVLPTLISMYAECSDLDAARGVFCREGARCVVSYNSLITACVRSSRP 63
H K+GL V LI MYA+C L+ A VF ++ +++ +I A
Sbjct: 257 HDYVRKIGLGSLVKVSTALIDMYAKCGSLEDAIDVFQGMESKDRQAWSVMIVAYANHGYG 316
Query: 62 GEALALFREMQAKALGPTDV 3
EA++LF EM+ + + P D+
Sbjct: 317 REAISLFEEMKKEGMKPDDI 336
>ref|XP_004981445.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like isoform X1 [Setaria italica]
gi|514813325|ref|XP_004981446.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g02980-like isoform X2 [Setaria italica]
gi|514813327|ref|XP_004981447.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g02980-like isoform X3 [Setaria italica]
Length = 605
Score = 208 bits (530), Expect = 1e-51
Identities = 117/204 (57%), Positives = 138/204 (67%), Gaps = 11/204 (5%)
Frame = -1
Query: 581 LARCSSLRDLQQLHALAIKYQLHHRPPFVARLIASCP-----PSASDYARSLFDQIPHP- 420
L C+SLR L QLHA A+K L P FV RL+ C P+ YAR +FD++PHP
Sbjct: 31 LPHCTSLRSLAQLHAAAVKAGLAAHPAFVTRLLTLCTAPGAAPAHLAYARQVFDRVPHPA 90
Query: 419 DSVLFNVLSRGYAR-----SHHPLRSVSLFAQMLLSGVAPDAYSFPALLKACATARALPE 255
D+V +N L RGYAR S +V +FA+ML GVAPD Y+F +LLKACA ARA E
Sbjct: 91 DAVWYNTLLRGYARGSPSSSAAAEAAVRVFARMLEEGVAPDTYTFVSLLKACAAARAGEE 150
Query: 254 GRQAHAAALKLGLADNAYVLPTLISMYAECSDLDAARGVFCREGARCVVSYNSLITACVR 75
GRQAHA A K+G A + YV PTLI+MYAEC D+ AAR +F R CVVSYN++I A VR
Sbjct: 151 GRQAHAVAAKVGAAGHEYVRPTLINMYAECGDVRAARAMFDRMEGDCVVSYNAMIAAAVR 210
Query: 74 SSRPGEALALFREMQAKALGPTDV 3
SSRPGEAL LFREMQAK L PT V
Sbjct: 211 SSRPGEALVLFREMQAKGLKPTSV 234
Score = 81.3 bits (199), Expect = 3e-13
Identities = 60/200 (30%), Positives = 95/200 (47%), Gaps = 6/200 (3%)
Frame = -1
Query: 584 LLARCSSLR---DLQQLHALAIKYQL---HHRPPFVARLIASCPPSASDYARSLFDQIPH 423
LL C++ R + +Q HA+A K + P + + A C + AR++FD++
Sbjct: 138 LLKACAAARAGEEGRQAHAVAAKVGAAGHEYVRPTLINMYAECGDVRA--ARAMFDRMEG 195
Query: 422 PDSVLFNVLSRGYARSHHPLRSVSLFAQMLLSGVAPDAYSFPALLKACATARALPEGRQA 243
V +N + RS P ++ LF +M G+ P + + + L ACA AL GR
Sbjct: 196 DCVVSYNAMIAAAVRSSRPGEALVLFREMQAKGLKPTSVTVISALSACALLGALELGRWI 255
Query: 242 HAAALKLGLADNAYVLPTLISMYAECSDLDAARGVFCREGARCVVSYNSLITACVRSSRP 63
H K+GL V LI MYA+C L+ A VF +R +++ +I A
Sbjct: 256 HDYVRKIGLDSLVKVSTALIDMYAKCGSLEDAVAVFQGMESRDKQAWSVMIVAYANHGYG 315
Query: 62 GEALALFREMQAKALGPTDV 3
EA+ LF EM+ + + P D+
Sbjct: 316 REAILLFEEMKKQGIKPDDI 335
>ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Glycine max]
Length = 609
Score = 208 bits (529), Expect = 1e-51
Identities = 107/198 (54%), Positives = 142/198 (71%), Gaps = 4/198 (2%)
Frame = -1
Query: 584 LLARCSSLRDLQQLHALAIKYQLHHRPPFVARLIASC---PPSAS-DYARSLFDQIPHPD 417
L+ +C+SLR+L+Q+ A IK + P + +LI C P AS D+A +FD+IP PD
Sbjct: 41 LIPKCTSLRELKQIQAYTIKTH-QNNPTVLTKLINFCTSNPTIASMDHAHRMFDKIPQPD 99
Query: 416 SVLFNVLSRGYARSHHPLRSVSLFAQMLLSGVAPDAYSFPALLKACATARALPEGRQAHA 237
VLFN ++RGYAR PLR++ L +Q+L SG+ PD Y+F +LLKACA +AL EG+Q H
Sbjct: 100 IVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLLKACARLKALEEGKQLHC 159
Query: 236 AALKLGLADNAYVLPTLISMYAECSDLDAARGVFCREGARCVVSYNSLITACVRSSRPGE 57
A+KLG+ DN YV PTLI+MY C+D+DAAR VF + G CVV+YN++IT+C R+SRP E
Sbjct: 160 LAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIGEPCVVAYNAIITSCARNSRPNE 219
Query: 56 ALALFREMQAKALGPTDV 3
ALALFRE+Q L PTDV
Sbjct: 220 ALALFRELQESGLKPTDV 237
Score = 87.0 bits (214), Expect = 5e-15
Identities = 58/195 (29%), Positives = 94/195 (48%), Gaps = 3/195 (1%)
Frame = -1
Query: 578 ARCSSLRDLQQLHALAIKYQLHHRP---PFVARLIASCPPSASDYARSLFDQIPHPDSVL 408
AR +L + +QLH LA+K + P + + +C + D AR +FD+I P V
Sbjct: 146 ARLKALEEGKQLHCLAVKLGVGDNMYVCPTLINMYTAC--NDVDAARRVFDKIGEPCVVA 203
Query: 407 FNVLSRGYARSHHPLRSVSLFAQMLLSGVAPDAYSFPALLKACATARALPEGRQAHAAAL 228
+N + AR+ P +++LF ++ SG+ P + L +CA AL GR H
Sbjct: 204 YNAIITSCARNSRPNEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGRWIHEYVK 263
Query: 227 KLGLADNAYVLPTLISMYAECSDLDAARGVFCREGARCVVSYNSLITACVRSSRPGEALA 48
K G V LI MYA+C LD A VF R +++++I A +A++
Sbjct: 264 KNGFDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIVAYATHGHGSQAIS 323
Query: 47 LFREMQAKALGPTDV 3
+ REM+ + P ++
Sbjct: 324 MLREMKKAKVQPDEI 338
>ref|XP_006650721.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like isoform X1 [Oryza brachyantha]
Length = 601
Score = 207 bits (527), Expect = 2e-51
Identities = 112/200 (56%), Positives = 134/200 (67%), Gaps = 7/200 (3%)
Frame = -1
Query: 581 LARCSSLRDLQQLHALAIKYQLHHRPPFVARLIASCPPSASD------YARSLFDQIPHP 420
L C++LR L QLHA A+K L P FV RL+ C + YAR +FD+IPHP
Sbjct: 31 LPHCTTLRALAQLHAAAVKAGLQAHPAFVTRLLTLCTDQGAATRAHLAYARQVFDRIPHP 90
Query: 419 -DSVLFNVLSRGYARSHHPLRSVSLFAQMLLSGVAPDAYSFPALLKACATARALPEGRQA 243
D V +N L RGYAR + +F +M+ GVAPD Y+F +LLKACA ARA EGRQA
Sbjct: 91 GDVVWYNTLLRGYARGGGAGEAARVFVRMMEEGVAPDTYTFVSLLKACAAARAGEEGRQA 150
Query: 242 HAAALKLGLADNAYVLPTLISMYAECSDLDAARGVFCREGARCVVSYNSLITACVRSSRP 63
H A+K G A++ YV+PTLI+MYAEC D AAR +F R CVVSYN++ITA VRSSRP
Sbjct: 151 HGVAVKAGAAEHEYVVPTLINMYAECGDARAARVMFDRMDGECVVSYNAMITAAVRSSRP 210
Query: 62 GEALALFREMQAKALGPTDV 3
GEAL LFREMQAK L PT V
Sbjct: 211 GEALVLFREMQAKGLKPTSV 230
Score = 80.5 bits (197), Expect = 4e-13
Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 6/200 (3%)
Frame = -1
Query: 584 LLARCSSLR---DLQQLHALAIKY---QLHHRPPFVARLIASCPPSASDYARSLFDQIPH 423
LL C++ R + +Q H +A+K + + P + + A C + + AR +FD++
Sbjct: 134 LLKACAAARAGEEGRQAHGVAVKAGAAEHEYVVPTLINMYAECGDARA--ARVMFDRMDG 191
Query: 422 PDSVLFNVLSRGYARSHHPLRSVSLFAQMLLSGVAPDAYSFPALLKACATARALPEGRQA 243
V +N + RS P ++ LF +M G+ P + + ++L AC AL GR
Sbjct: 192 ECVVSYNAMITAAVRSSRPGEALVLFREMQAKGLKPTSVTLISVLSACGLLGALELGRWI 251
Query: 242 HAAALKLGLADNAYVLPTLISMYAECSDLDAARGVFCREGARCVVSYNSLITACVRSSRP 63
H K+ L V LI MYA+C L+ A GVF +R +++ +I A
Sbjct: 252 HEYIRKIRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVMIVAYANHGYG 311
Query: 62 GEALALFREMQAKALGPTDV 3
EA+++F EM+ + + P DV
Sbjct: 312 REAISMFEEMKKQGIKPDDV 331
>ref|XP_004298429.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Fragaria vesca subsp. vesca]
Length = 593
Score = 207 bits (527), Expect = 2e-51
Identities = 106/198 (53%), Positives = 140/198 (70%), Gaps = 4/198 (2%)
Frame = -1
Query: 584 LLARCSSLRDLQQLHALAIKYQLHHRPPFVARLIASCP--PSAS--DYARSLFDQIPHPD 417
L+ +C+SL LQQ+ A +IK L + +++LI SC P+A+ DYA LFDQIPHPD
Sbjct: 24 LIPKCTSLTQLQQIQAFSIKTHLQYDLSVLSKLINSCTLNPTATSMDYAHQLFDQIPHPD 83
Query: 416 SVLFNVLSRGYARSHHPLRSVSLFAQMLLSGVAPDAYSFPALLKACATARALPEGRQAHA 237
V+FN ++RGY+RS P R++SLF+Q+L SG+ PD Y+FPALLKACA +AL EG+Q H
Sbjct: 84 IVVFNTMARGYSRSTTPFRAISLFSQVLSSGIFPDDYTFPALLKACAACKALEEGKQLHC 143
Query: 236 AALKLGLADNAYVLPTLISMYAECSDLDAARGVFCREGARCVVSYNSLITACVRSSRPGE 57
+K G+ N +V P LI+MY ECS +D AR VF + CVV +N++IT R+SRP E
Sbjct: 144 YVIKCGMQLNIFVCPALINMYTECSAVDVARQVFDKMPEPCVVVHNAMITGYARNSRPNE 203
Query: 56 ALALFREMQAKALGPTDV 3
ALALFRE+QA L PTDV
Sbjct: 204 ALALFRELQASGLKPTDV 221
Score = 89.7 bits (221), Expect = 7e-16
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 3/195 (1%)
Frame = -1
Query: 578 ARCSSLRDLQQLHALAIKYQLHHRP---PFVARLIASCPPSASDYARSLFDQIPHPDSVL 408
A C +L + +QLH IK + P + + C SA D AR +FD++P P V+
Sbjct: 130 AACKALEEGKQLHCYVIKCGMQLNIFVCPALINMYTEC--SAVDVARQVFDKMPEPCVVV 187
Query: 407 FNVLSRGYARSHHPLRSVSLFAQMLLSGVAPDAYSFPALLKACATARALPEGRQAHAAAL 228
N + GYAR+ P +++LF ++ SG+ P + + L +CA AL G+ H
Sbjct: 188 HNAMITGYARNSRPNEALALFRELQASGLKPTDVTMLSALSSCALLGALDLGKWIHEYVK 247
Query: 227 KLGLADNAYVLPTLISMYAECSDLDAARGVFCREGARCVVSYNSLITACVRSSRPGEALA 48
K V LI MY++C L+ A VF + +++++I A +A+
Sbjct: 248 KNRFDRYVKVNTALIDMYSKCGSLEDAVSVFENMSVKDTQAWSAMIVAYATHGNVSKAML 307
Query: 47 LFREMQAKALGPTDV 3
+F EM+ + P ++
Sbjct: 308 MFEEMKRARIRPDEI 322
>ref|XP_006438696.1| hypothetical protein CICLE_v10031011mg [Citrus clementina]
gi|568859243|ref|XP_006483151.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g02980-like [Citrus sinensis]
gi|557540892|gb|ESR51936.1| hypothetical protein
CICLE_v10031011mg [Citrus clementina]
Length = 598
Score = 204 bits (520), Expect = 2e-50
Identities = 108/200 (54%), Positives = 141/200 (70%), Gaps = 6/200 (3%)
Frame = -1
Query: 584 LLARCSSLRDLQQLHALAIKYQLHHRPPFVARLIASCPP----SASDYARSLFDQIPHPD 417
LL RC+S R L+Q+HA+ IK L + + +LI C S+ ++A LFD+IP PD
Sbjct: 27 LLPRCTSFRGLKQIHAVTIKTHLQNDLNVLTKLINFCTQNPTTSSMEHAHLLFDRIPEPD 86
Query: 416 SVLFNVLSRGYARSHHPLRSVSLFAQMLLSGVAPDAYSFPALLKACAT--ARALPEGRQA 243
VLFN ++RGY+RS P+R++ LF ++L SG+ PD YSFP+LLKACA A AL EG+Q
Sbjct: 87 IVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKACACVGAEALEEGKQL 146
Query: 242 HAAALKLGLADNAYVLPTLISMYAECSDLDAARGVFCREGARCVVSYNSLITACVRSSRP 63
H A+KLGL N YV TLI++YAECSD++AAR +F CVVSYN++ITA RSSRP
Sbjct: 147 HCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNAIITAYARSSRP 206
Query: 62 GEALALFREMQAKALGPTDV 3
EAL+LFRE+Q + L PTDV
Sbjct: 207 NEALSLFRELQERNLKPTDV 226
Score = 79.7 bits (195), Expect = 7e-13
Identities = 55/191 (28%), Positives = 90/191 (47%), Gaps = 3/191 (1%)
Frame = -1
Query: 566 SLRDLQQLHALAIKYQLHHRPPFVARLI---ASCPPSASDYARSLFDQIPHPDSVLFNVL 396
+L + +QLH AIK L+ LI A C S + AR +F+ I P V +N +
Sbjct: 139 ALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAEC--SDVEAARRIFENISEPCVVSYNAI 196
Query: 395 SRGYARSHHPLRSVSLFAQMLLSGVAPDAYSFPALLKACATARALPEGRQAHAAALKLGL 216
YARS P ++SLF ++ + P + + L +CA +L G+ H K GL
Sbjct: 197 ITAYARSSRPNEALSLFRELQERNLKPTDVTMLSALSSCALLGSLDLGKWIHEYIKKYGL 256
Query: 215 ADNAYVLPTLISMYAECSDLDAARGVFCREGARCVVSYNSLITACVRSSRPGEALALFRE 36
V LI M+A+C LD A VF + +++++I A + +++ +F E
Sbjct: 257 DKYVKVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSILMFEE 316
Query: 35 MQAKALGPTDV 3
M + P ++
Sbjct: 317 MMKAQVSPDEI 327
>ref|XP_006395744.1| hypothetical protein EUTSA_v10003852mg [Eutrema salsugineum]
gi|557092383|gb|ESQ33030.1| hypothetical protein
EUTSA_v10003852mg [Eutrema salsugineum]
Length = 605
Score = 204 bits (519), Expect = 2e-50
Identities = 107/199 (53%), Positives = 136/199 (68%), Gaps = 5/199 (2%)
Frame = -1
Query: 584 LLARCSSLRDLQQLHALAIKYQLHHRPPFVARLIASCPP----SASDYARSLFDQIPHPD 417
L++RC+SLR+L Q+ AIK LH F+ +LI C S+ YAR LFD +P PD
Sbjct: 35 LISRCTSLRELMQIQGYAIKSHLHEDVSFITKLINFCTEYPTTSSMSYARQLFDAMPEPD 94
Query: 416 SVLFNVLSRGYARSHHPLRSVSLFAQMLLSG-VAPDAYSFPALLKACATARALPEGRQAH 240
V+FN ++RGY+RS PL + SLF ++L + PD Y+FP+LLKACA A+AL EGRQ H
Sbjct: 95 IVVFNSMARGYSRSTTPLEAFSLFVEILEDDYLLPDGYTFPSLLKACAAAKALEEGRQLH 154
Query: 239 AAALKLGLADNAYVLPTLISMYAECSDLDAARGVFCREGARCVVSYNSLITACVRSSRPG 60
++KLGL DN YV PTLI+MY EC D+DAAR VF CVVSYN++IT R +RP
Sbjct: 155 CLSMKLGLDDNIYVCPTLINMYTECEDVDAARCVFDGIVEPCVVSYNAMITGYARRNRPN 214
Query: 59 EALALFREMQAKALGPTDV 3
EAL+LFREMQ K L P +V
Sbjct: 215 EALSLFREMQGKNLKPNEV 233
Score = 84.7 bits (208), Expect = 2e-14
Identities = 55/200 (27%), Positives = 100/200 (50%), Gaps = 6/200 (3%)
Frame = -1
Query: 584 LLARCSSLRDLQ---QLHALAIKYQLHHRP---PFVARLIASCPPSASDYARSLFDQIPH 423
LL C++ + L+ QLH L++K L P + + C D AR +FD I
Sbjct: 137 LLKACAAAKALEEGRQLHCLSMKLGLDDNIYVCPTLINMYTECEDV--DAARCVFDGIVE 194
Query: 422 PDSVLFNVLSRGYARSHHPLRSVSLFAQMLLSGVAPDAYSFPALLKACATARALPEGRQA 243
P V +N + GYAR + P ++SLF +M + P+ + ++L +C+ +L G+
Sbjct: 195 PCVVSYNAMITGYARRNRPNEALSLFREMQGKNLKPNEVTLLSVLSSCSLLGSLDLGKWI 254
Query: 242 HAAALKLGLADNAYVLPTLISMYAECSDLDAARGVFCREGARCVVSYNSLITACVRSSRP 63
H A K G V+ LI M+A+C LD A +F R + +++++I A +
Sbjct: 255 HEYAKKHGFCKYVKVITALIDMFAKCGSLDDAVSLFERMRHKDTQAWSAMIVAYANHGQA 314
Query: 62 GEALALFREMQAKALGPTDV 3
+++ +F M+++ + P ++
Sbjct: 315 EKSMLMFERMRSENVQPDEI 334
>ref|XP_006290747.1| hypothetical protein CARUB_v10016843mg [Capsella rubella]
gi|482559454|gb|EOA23645.1| hypothetical protein
CARUB_v10016843mg [Capsella rubella]
Length = 630
Score = 204 bits (518), Expect = 3e-50
Identities = 103/197 (52%), Positives = 136/197 (69%), Gaps = 4/197 (2%)
Frame = -1
Query: 581 LARCSSLRDLQQLHALAIKYQLHHRPPFVARLIASCPPSASD----YARSLFDQIPHPDS 414
++RC SLR+L Q+ AIK LH F+ +LI C S ++ YAR LFD + PD
Sbjct: 62 ISRCKSLRELMQIQGYAIKSHLHEDVSFITKLINFCTESPTESSMSYARHLFDAMSEPDI 121
Query: 413 VLFNVLSRGYARSHHPLRSVSLFAQMLLSGVAPDAYSFPALLKACATARALPEGRQAHAA 234
V+FN ++RGY+RS PL + SLFA++L + PD Y+FP+LLKACA A+AL EGRQ H
Sbjct: 122 VIFNSMARGYSRSTTPLDAFSLFAEILGGDLLPDNYTFPSLLKACAVAKALEEGRQLHCL 181
Query: 233 ALKLGLADNAYVLPTLISMYAECSDLDAARGVFCREGARCVVSYNSLITACVRSSRPGEA 54
++KLGL DN YV PTLI+MY EC D+D+AR VF R CVV YN++IT + +RP EA
Sbjct: 182 SMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYAKRNRPNEA 241
Query: 53 LALFREMQAKALGPTDV 3
L+LFREMQ K+L P ++
Sbjct: 242 LSLFREMQGKSLKPNEI 258
Score = 79.7 bits (195), Expect = 7e-13
Identities = 53/200 (26%), Positives = 99/200 (49%), Gaps = 6/200 (3%)
Frame = -1
Query: 584 LLARCS---SLRDLQQLHALAIKYQLHHRP---PFVARLIASCPPSASDYARSLFDQIPH 423
LL C+ +L + +QLH L++K L P + + C D AR +FD+I
Sbjct: 162 LLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDV--DSARCVFDRIVE 219
Query: 422 PDSVLFNVLSRGYARSHHPLRSVSLFAQMLLSGVAPDAYSFPALLKACATARALPEGRQA 243
P V +N + GYA+ + P ++SLF +M + P+ + ++L +CA +L G+
Sbjct: 220 PCVVCYNAMITGYAKRNRPNEALSLFREMQGKSLKPNEITLLSVLSSCALLGSLDLGKWI 279
Query: 242 HAAALKLGLADNAYVLPTLISMYAECSDLDAARGVFCREGARCVVSYNSLITACVRSSRP 63
H A K V LI M+A+C LD A +F + + +++++I A +
Sbjct: 280 HEYAKKHEFCKYVKVNTALIDMFAKCGSLDDAVSLFEKMRYKDTQAWSAMIVAYANHGKA 339
Query: 62 GEALALFREMQAKALGPTDV 3
+++ +F M+++ + P ++
Sbjct: 340 EQSMLMFDRMRSENVQPDEI 359
>ref|XP_003557509.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 615
Score = 200 bits (509), Expect = 3e-49
Identities = 114/207 (55%), Positives = 137/207 (66%), Gaps = 14/207 (6%)
Frame = -1
Query: 581 LARCSSLRDLQQLHALAIKYQLHHRPPFVARLIASCP------PSASDYARSLFDQIPHP 420
L +C++LR L QLHA A+K L P FV RL+ C P+ YAR +FD+IP P
Sbjct: 38 LPQCTTLRALAQLHAAAVKSGLQAHPAFVTRLLTLCTDQGAAKPAQLSYARQVFDRIPGP 97
Query: 419 -DSVLFNVLSRGYAR------SHHPLRSVS-LFAQMLLSGVAPDAYSFPALLKACATARA 264
D V +N L RGYAR + P + +F +ML GVAPD Y+F +LLKACA ARA
Sbjct: 98 GDVVWYNTLLRGYARCSAAGGARPPAEEAARVFVRMLEEGVAPDTYTFVSLLKACAAARA 157
Query: 263 LPEGRQAHAAALKLGLADNAYVLPTLISMYAECSDLDAARGVFCREGARCVVSYNSLITA 84
EGRQAH A+K+G A++ YVLPTLI+MYAEC D AAR +F R CVVSYN++ITA
Sbjct: 158 GEEGRQAHGVAVKVGAAEHEYVLPTLINMYAECGDARAARTMFGRVDGECVVSYNAMITA 217
Query: 83 CVRSSRPGEALALFREMQAKALGPTDV 3
VRSSRPGEAL LFREMQAK L T V
Sbjct: 218 AVRSSRPGEALVLFREMQAKGLKLTSV 244
Score = 75.5 bits (184), Expect = 1e-11
Identities = 57/200 (28%), Positives = 96/200 (48%), Gaps = 6/200 (3%)
Frame = -1
Query: 584 LLARCSSLR---DLQQLHALAIKY---QLHHRPPFVARLIASCPPSASDYARSLFDQIPH 423
LL C++ R + +Q H +A+K + + P + + A C + + AR++F ++
Sbjct: 148 LLKACAAARAGEEGRQAHGVAVKVGAAEHEYVLPTLINMYAECGDARA--ARTMFGRVDG 205
Query: 422 PDSVLFNVLSRGYARSHHPLRSVSLFAQMLLSGVAPDAYSFPALLKACATARALPEGRQA 243
V +N + RS P ++ LF +M G+ + + ++L ACA AL GR
Sbjct: 206 ECVVSYNAMITAAVRSSRPGEALVLFREMQAKGLKLTSVTLISVLSACALLGALELGRWI 265
Query: 242 HAAALKLGLADNAYVLPTLISMYAECSDLDAARGVFCREGARCVVSYNSLITACVRSSRP 63
H K+ L V LI MY +C L+ A VF +R +++ +I A S
Sbjct: 266 HEYVRKVQLDSLVKVNTALIDMYGKCGSLEDAISVFQGMESRDRQAWSVMIVAYANHSYG 325
Query: 62 GEALALFREMQAKALGPTDV 3
EA++LF EM+ + + P DV
Sbjct: 326 REAISLFEEMKKQGIKPDDV 345
>dbj|BAJ88458.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 551
Score = 200 bits (509), Expect = 3e-49
Identities = 115/201 (57%), Positives = 134/201 (66%), Gaps = 8/201 (3%)
Frame = -1
Query: 581 LARCSSLRDLQQLHALAIKYQLHHRPPFVARLIASCP-----PSASDYARSLFDQIPHP- 420
L C+SLR L QLHA A+K L P V RL+ C P+ YAR +FD+IP P
Sbjct: 26 LPHCTSLRALAQLHAAAVKSGLGAHPALVTRLLTLCTKQGAAPAHLAYARQVFDRIPTPG 85
Query: 419 DSVLFNVLSRGYARSHH-PLRSVSLFAQMLLSGVAPDAYSFPALLKACATARALPEGRQA 243
D V +N L RGYARS + + A+ML GVAPD Y+F +LLKACA ARA EGRQA
Sbjct: 86 DVVWYNTLLRGYARSSDGAAEAARVLARMLEEGVAPDTYTFVSLLKACAAARAGEEGRQA 145
Query: 242 HAAALKLGLADNAYVLPTLISMYAECSDLDAARGVFCR-EGARCVVSYNSLITACVRSSR 66
H A+K G AD+ YVLPTLI+MYAEC D +AR +F R CVVSYN++ITA VRSSR
Sbjct: 146 HGVAVKTGAADHEYVLPTLINMYAECGDARSARAMFGRVPNGDCVVSYNAMITAAVRSSR 205
Query: 65 PGEALALFREMQAKALGPTDV 3
PGEAL LFREMQAK L PT V
Sbjct: 206 PGEALVLFREMQAKGLKPTSV 226
Score = 82.8 bits (203), Expect = 9e-14
Identities = 61/201 (30%), Positives = 98/201 (48%), Gaps = 7/201 (3%)
Frame = -1
Query: 584 LLARCSSLR---DLQQLHALAIKYQLHHRP---PFVARLIASCPPSASDYARSLFDQIPH 423
LL C++ R + +Q H +A+K P + + A C + S AR++F ++P+
Sbjct: 129 LLKACAAARAGEEGRQAHGVAVKTGAADHEYVLPTLINMYAECGDARS--ARAMFGRVPN 186
Query: 422 PDSVL-FNVLSRGYARSHHPLRSVSLFAQMLLSGVAPDAYSFPALLKACATARALPEGRQ 246
D V+ +N + RS P ++ LF +M G+ P + + ++L ACA AL GR
Sbjct: 187 GDCVVSYNAMITAAVRSSRPGEALVLFREMQAKGLKPTSVTVTSVLSACALLGALELGRW 246
Query: 245 AHAAALKLGLADNAYVLPTLISMYAECSDLDAARGVFCREGARCVVSYNSLITACVRSSR 66
H K GL V LI MY +C L+ A VF +R +++ +I A S
Sbjct: 247 IHEYVRKAGLDSLVKVNTALIDMYGKCGSLEDAIDVFQGMESRDRQAWSVMIVAYANHSY 306
Query: 65 PGEALALFREMQAKALGPTDV 3
EA++LF EM+ + + P V
Sbjct: 307 GREAISLFEEMKKQGIRPDAV 327
>gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thaliana]
Length = 603
Score = 200 bits (508), Expect = 4e-49
Identities = 103/198 (52%), Positives = 137/198 (69%), Gaps = 4/198 (2%)
Frame = -1
Query: 584 LLARCSSLRDLQQLHALAIKYQLHHRPPFVARLIASCPPSASD----YARSLFDQIPHPD 417
L+++C+SLR+L Q+ A AIK + FVA+LI C S ++ YAR LF+ + PD
Sbjct: 35 LISKCNSLRELMQIQAYAIKSHIED-VSFVAKLINFCTESPTESSMSYARHLFEAMSEPD 93
Query: 416 SVLFNVLSRGYARSHHPLRSVSLFAQMLLSGVAPDAYSFPALLKACATARALPEGRQAHA 237
V+FN ++RGY+R +PL SLF ++L G+ PD Y+FP+LLKACA A+AL EGRQ H
Sbjct: 94 IVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHC 153
Query: 236 AALKLGLADNAYVLPTLISMYAECSDLDAARGVFCREGARCVVSYNSLITACVRSSRPGE 57
++KLGL DN YV PTLI+MY EC D+D+AR VF R CVV YN++IT R +RP E
Sbjct: 154 LSMKLGLDDNVYVCPTLINMYTECEDVDSARXVFDRIVEPCVVCYNAMITGYARRNRPNE 213
Query: 56 ALALFREMQAKALGPTDV 3
AL+LFREMQ K L P ++
Sbjct: 214 ALSLFREMQGKYLKPNEI 231
Score = 81.6 bits (200), Expect = 2e-13
Identities = 54/200 (27%), Positives = 99/200 (49%), Gaps = 6/200 (3%)
Frame = -1
Query: 584 LLARCS---SLRDLQQLHALAIKYQLHHRP---PFVARLIASCPPSASDYARSLFDQIPH 423
LL C+ +L + +QLH L++K L P + + C D AR +FD+I
Sbjct: 135 LLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDV--DSARXVFDRIVE 192
Query: 422 PDSVLFNVLSRGYARSHHPLRSVSLFAQMLLSGVAPDAYSFPALLKACATARALPEGRQA 243
P V +N + GYAR + P ++SLF +M + P+ + ++L +CA +L G+
Sbjct: 193 PCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWI 252
Query: 242 HAAALKLGLADNAYVLPTLISMYAECSDLDAARGVFCREGARCVVSYNSLITACVRSSRP 63
H A K V LI M+A+C LD A +F + + +++++I A +
Sbjct: 253 HKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKA 312
Query: 62 GEALALFREMQAKALGPTDV 3
+++ +F M+++ + P ++
Sbjct: 313 EKSMLMFERMRSENVQPDEI 332
>ref|NP_178398.1| RNA editing factor OTP85 [Arabidopsis thaliana]
gi|218546779|sp|Q8LK93.2|PP145_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g02980 gi|3461822|gb|AAC32916.1| hypothetical protein
[Arabidopsis thaliana] gi|330250557|gb|AEC05651.1| RNA
editing factor OTP85 [Arabidopsis thaliana]
Length = 603
Score = 199 bits (506), Expect = 6e-49
Identities = 103/198 (52%), Positives = 137/198 (69%), Gaps = 4/198 (2%)
Frame = -1
Query: 584 LLARCSSLRDLQQLHALAIKYQLHHRPPFVARLIASCPPSASD----YARSLFDQIPHPD 417
L+++C+SLR+L Q+ A AIK + FVA+LI C S ++ YAR LF+ + PD
Sbjct: 35 LISKCNSLRELMQIQAYAIKSHIED-VSFVAKLINFCTESPTESSMSYARHLFEAMSEPD 93
Query: 416 SVLFNVLSRGYARSHHPLRSVSLFAQMLLSGVAPDAYSFPALLKACATARALPEGRQAHA 237
V+FN ++RGY+R +PL SLF ++L G+ PD Y+FP+LLKACA A+AL EGRQ H
Sbjct: 94 IVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHC 153
Query: 236 AALKLGLADNAYVLPTLISMYAECSDLDAARGVFCREGARCVVSYNSLITACVRSSRPGE 57
++KLGL DN YV PTLI+MY EC D+D+AR VF R CVV YN++IT R +RP E
Sbjct: 154 LSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNE 213
Query: 56 ALALFREMQAKALGPTDV 3
AL+LFREMQ K L P ++
Sbjct: 214 ALSLFREMQGKYLKPNEI 231
Score = 81.6 bits (200), Expect = 2e-13
Identities = 54/200 (27%), Positives = 99/200 (49%), Gaps = 6/200 (3%)
Frame = -1
Query: 584 LLARCS---SLRDLQQLHALAIKYQLHHRP---PFVARLIASCPPSASDYARSLFDQIPH 423
LL C+ +L + +QLH L++K L P + + C D AR +FD+I
Sbjct: 135 LLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDV--DSARCVFDRIVE 192
Query: 422 PDSVLFNVLSRGYARSHHPLRSVSLFAQMLLSGVAPDAYSFPALLKACATARALPEGRQA 243
P V +N + GYAR + P ++SLF +M + P+ + ++L +CA +L G+
Sbjct: 193 PCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWI 252
Query: 242 HAAALKLGLADNAYVLPTLISMYAECSDLDAARGVFCREGARCVVSYNSLITACVRSSRP 63
H A K V LI M+A+C LD A +F + + +++++I A +
Sbjct: 253 HKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKA 312
Query: 62 GEALALFREMQAKALGPTDV 3
+++ +F M+++ + P ++
Sbjct: 313 EKSMLMFERMRSENVQPDEI 332
>ref|NP_001130403.1| uncharacterized protein LOC100191499 [Zea mays]
gi|194689034|gb|ACF78601.1| unknown [Zea mays]
gi|413932819|gb|AFW67370.1| hypothetical protein
ZEAMMB73_996266 [Zea mays]
Length = 606
Score = 199 bits (505), Expect = 8e-49
Identities = 114/204 (55%), Positives = 132/204 (64%), Gaps = 11/204 (5%)
Frame = -1
Query: 581 LARCSSLRDLQQLHALAIKYQLHHRPPFVARLIASCP-----PSASDYARSLFDQIPHP- 420
L C+SLR L QLHA A+K L P V RL+ C P+ YAR +FD++ P
Sbjct: 32 LPHCTSLRGLAQLHAAAVKAGLAAHPALVTRLLTLCTGPGAGPAHLAYARQVFDRVTQPS 91
Query: 419 DSVLFNVLSRGYARSHHPLRS-----VSLFAQMLLSGVAPDAYSFPALLKACATARALPE 255
D+V +N L RGYARS S V +F +ML GVAPD Y+F +LLKACA ARA
Sbjct: 92 DAVWYNTLLRGYARSSSSSSSSSAAAVRVFVRMLEEGVAPDTYTFVSLLKACAAARAGEH 151
Query: 254 GRQAHAAALKLGLADNAYVLPTLISMYAECSDLDAARGVFCREGARCVVSYNSLITACVR 75
GRQAHA A+KLG A + YV PTLI+MYAEC D AAR F R CVVSYN++I A VR
Sbjct: 152 GRQAHAVAVKLGAAGHDYVRPTLINMYAECGDARAARVTFGRADGDCVVSYNAMIAAAVR 211
Query: 74 SSRPGEALALFREMQAKALGPTDV 3
SSRPGEAL LFREMQAK L PT V
Sbjct: 212 SSRPGEALVLFREMQAKGLNPTPV 235
Score = 77.8 bits (190), Expect = 3e-12
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 6/200 (3%)
Frame = -1
Query: 584 LLARCSSLRDLQ---QLHALAIKYQL---HHRPPFVARLIASCPPSASDYARSLFDQIPH 423
LL C++ R + Q HA+A+K + P + + A C + + AR F +
Sbjct: 139 LLKACAAARAGEHGRQAHAVAVKLGAAGHDYVRPTLINMYAECGDARA--ARVTFGRADG 196
Query: 422 PDSVLFNVLSRGYARSHHPLRSVSLFAQMLLSGVAPDAYSFPALLKACATARALPEGRQA 243
V +N + RS P ++ LF +M G+ P + ++L ACA AL GR
Sbjct: 197 DCVVSYNAMIAAAVRSSRPGEALVLFREMQAKGLNPTPVTVISVLSACALLGALQLGRWL 256
Query: 242 HAAALKLGLADNAYVLPTLISMYAECSDLDAARGVFCREGARCVVSYNSLITACVRSSRP 63
H KLGL V L+ MYA+C L+ A VF +R +++ +I A
Sbjct: 257 HDYVRKLGLGSLVKVSTALVDMYAKCGSLEDAIAVFQGMESRDRQAWSVMIVAYANHGYG 316
Query: 62 GEALALFREMQAKALGPTDV 3
EA++LF EM+ + + P D+
Sbjct: 317 REAISLFEEMKKQGMKPDDI 336
>gb|EOY01914.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao]
Length = 604
Score = 198 bits (503), Expect = 1e-48
Identities = 96/198 (48%), Positives = 141/198 (71%), Gaps = 4/198 (2%)
Frame = -1
Query: 584 LLARCSSLRDLQQLHALAIKYQLHHRPPFVARLIASCPPSAS----DYARSLFDQIPHPD 417
LL +C+SLR+++Q+ A AIK L + F+ +LI C + + +YA +FD++ PD
Sbjct: 35 LLPKCASLREVKQIQAFAIKTHLQNDITFLTKLINFCTKNPTFTSMEYAHKVFDKVSQPD 94
Query: 416 SVLFNVLSRGYARSHHPLRSVSLFAQMLLSGVAPDAYSFPALLKACATARALPEGRQAHA 237
VLFN ++RGY+RS+ P +++ L +Q+L G PD Y+FP++LKAC++++AL EG+Q H
Sbjct: 95 IVLFNTMARGYSRSNTPTQAIPLVSQLLSFGFLPDDYTFPSVLKACSSSKALEEGKQIHC 154
Query: 236 AALKLGLADNAYVLPTLISMYAECSDLDAARGVFCREGARCVVSYNSLITACVRSSRPGE 57
+KLGL N Y+ P+LISMY EC+DLD+AR VF + CV+SYN++IT + SRP E
Sbjct: 155 LVIKLGLNHNIYICPSLISMYTECNDLDSARRVFDKMLDPCVISYNAIITGYAKCSRPNE 214
Query: 56 ALALFREMQAKALGPTDV 3
AL+LFRE+Q K+L PTDV
Sbjct: 215 ALSLFRELQVKSLKPTDV 232
Score = 82.4 bits (202), Expect = 1e-13
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 6/200 (3%)
Frame = -1
Query: 584 LLARCSSLRDLQ---QLHALAIKYQLHHRP---PFVARLIASCPPSASDYARSLFDQIPH 423
+L CSS + L+ Q+H L IK L+H P + + C + D AR +FD++
Sbjct: 136 VLKACSSSKALEEGKQIHCLVIKLGLNHNIYICPSLISMYTEC--NDLDSARRVFDKMLD 193
Query: 422 PDSVLFNVLSRGYARSHHPLRSVSLFAQMLLSGVAPDAYSFPALLKACATARALPEGRQA 243
P + +N + GYA+ P ++SLF ++ + + P + ++L CA AL G+
Sbjct: 194 PCVISYNAIITGYAKCSRPNEALSLFRELQVKSLKPTDVTMLSVLSCCALLGALDLGKWI 253
Query: 242 HAAALKLGLADNAYVLPTLISMYAECSDLDAARGVFCREGARCVVSYNSLITACVRSSRP 63
H K G V +I MYA+C L+ A VF R +++++I A +
Sbjct: 254 HEYVNKHGFDKYIKVSTAIIDMYAKCGSLEDAVCVFENITLRDTPAWSAMIVAFATHGKG 313
Query: 62 GEALALFREMQAKALGPTDV 3
+A+ F EM+ + P ++
Sbjct: 314 YKAIETFEEMRKAGVQPDEI 333
>ref|XP_002316137.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222865177|gb|EEF02308.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 601
Score = 198 bits (503), Expect = 1e-48
Identities = 102/197 (51%), Positives = 139/197 (70%), Gaps = 4/197 (2%)
Frame = -1
Query: 581 LARCSSLRDLQQLHALAIKYQLHHRPPFVARLIASC---PPSAS-DYARSLFDQIPHPDS 414
L +C+SL++L+Q+ A +IK L + + +LI SC P +AS DYA LF+ IP PD
Sbjct: 33 LPKCTSLKELKQIQAFSIKTHLQNDLQILTKLINSCTQNPTTASMDYAHQLFEAIPQPDI 92
Query: 413 VLFNVLSRGYARSHHPLRSVSLFAQMLLSGVAPDAYSFPALLKACATARALPEGRQAHAA 234
VLFN + RGY+RS+ PL+++SLF + L + PD Y+FP+LLKAC A+A +G+Q H
Sbjct: 93 VLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACVVAKAFQQGKQLHCL 152
Query: 233 ALKLGLADNAYVLPTLISMYAECSDLDAARGVFCREGARCVVSYNSLITACVRSSRPGEA 54
A+KLGL +N YV PTLI+MYA C+D+D A+ VF CVVSYN++IT RSSRP EA
Sbjct: 153 AIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAIITGYARSSRPNEA 212
Query: 53 LALFREMQAKALGPTDV 3
L+LFR++QA+ L P DV
Sbjct: 213 LSLFRQLQARKLKPNDV 229
Score = 94.4 bits (233), Expect = 3e-17
Identities = 60/186 (32%), Positives = 94/186 (50%), Gaps = 3/186 (1%)
Frame = -1
Query: 551 QQLHALAIKYQLHHRP---PFVARLIASCPPSASDYARSLFDQIPHPDSVLFNVLSRGYA 381
+QLH LAIK L+ P P + + A C + D A+ +FD+I P V +N + GYA
Sbjct: 147 KQLHCLAIKLGLNENPYVCPTLINMYAGC--NDVDGAQRVFDEILEPCVVSYNAIITGYA 204
Query: 380 RSHHPLRSVSLFAQMLLSGVAPDAYSFPALLKACATARALPEGRQAHAAALKLGLADNAY 201
RS P ++SLF Q+ + P+ + ++L +CA AL G+ H K GL
Sbjct: 205 RSSRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGLDKYVK 264
Query: 200 VLPTLISMYAECSDLDAARGVFCREGARCVVSYNSLITACVRSSRPGEALALFREMQAKA 21
V LI MYA+C LD A VF R +++++I A + + +++F EM
Sbjct: 265 VNTALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFEEMARAK 324
Query: 20 LGPTDV 3
+ P ++
Sbjct: 325 VQPDEI 330
>gb|EAZ28899.1| hypothetical protein OsJ_12939 [Oryza sativa Japonica Group]
Length = 611
Score = 197 bits (502), Expect = 2e-48
Identities = 112/206 (54%), Positives = 136/206 (66%), Gaps = 13/206 (6%)
Frame = -1
Query: 581 LARCSSLRDLQQLHALAIKYQ--LHHRPPFVARLIASCPPSASD------YARSLFDQIP 426
L C+SLR L QLHA+A+K L P FV RL+ C ++ YAR +FD+IP
Sbjct: 35 LPHCTSLRALAQLHAVAVKAGGGLQAHPAFVTRLLTLCTEQGAEAPAHLAYARQVFDRIP 94
Query: 425 HP-DSVLFNVLSRGYARSHH----PLRSVSLFAQMLLSGVAPDAYSFPALLKACATARAL 261
HP D V +N L RGYAR + +F +M+ GVAPD Y+F +LLKACA+ARA
Sbjct: 95 HPGDVVWYNTLLRGYARGGWGGGCAEEAARVFVRMMEEGVAPDTYTFVSLLKACASARAG 154
Query: 260 PEGRQAHAAALKLGLADNAYVLPTLISMYAECSDLDAARGVFCREGARCVVSYNSLITAC 81
EGRQAH A+K G A++ YV PTLI+MYAEC D+ AAR +F R CVVSYN++ITA
Sbjct: 155 EEGRQAHGVAVKAGAAEHEYVAPTLINMYAECGDVRAARVMFDRMDGECVVSYNAMITAS 214
Query: 80 VRSSRPGEALALFREMQAKALGPTDV 3
VRSS PGEAL LFREMQAK L PT V
Sbjct: 215 VRSSLPGEALVLFREMQAKGLKPTSV 240
Score = 79.7 bits (195), Expect = 7e-13
Identities = 59/200 (29%), Positives = 97/200 (48%), Gaps = 6/200 (3%)
Frame = -1
Query: 584 LLARCSSLR---DLQQLHALAIKY---QLHHRPPFVARLIASCPPSASDYARSLFDQIPH 423
LL C+S R + +Q H +A+K + + P + + A C + AR +FD++
Sbjct: 144 LLKACASARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYAECGDVRA--ARVMFDRMDG 201
Query: 422 PDSVLFNVLSRGYARSHHPLRSVSLFAQMLLSGVAPDAYSFPALLKACATARALPEGRQA 243
V +N + RS P ++ LF +M G+ P + + ++L ACA AL GR
Sbjct: 202 ECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLISVLSACALLGALELGRWI 261
Query: 242 HAAALKLGLADNAYVLPTLISMYAECSDLDAARGVFCREGARCVVSYNSLITACVRSSRP 63
H K+ L V LI MYA+C L+ A GVF +R +++ ++ A
Sbjct: 262 HDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANHGYG 321
Query: 62 GEALALFREMQAKALGPTDV 3
EA+++F EM+ + + P DV
Sbjct: 322 REAISMFEEMKKQGMKPDDV 341
>ref|NP_001051546.1| Os03g0795200 [Oryza sativa Japonica Group]
gi|50400032|gb|AAT76420.1| putative PPR repeat
containing protein [Oryza sativa Japonica Group]
gi|108711537|gb|ABF99332.1| pentatricopeptide, putative,
expressed [Oryza sativa Japonica Group]
gi|113550017|dbj|BAF13460.1| Os03g0795200 [Oryza sativa
Japonica Group]
Length = 611
Score = 197 bits (502), Expect = 2e-48
Identities = 112/206 (54%), Positives = 136/206 (66%), Gaps = 13/206 (6%)
Frame = -1
Query: 581 LARCSSLRDLQQLHALAIKYQ--LHHRPPFVARLIASCPPSASD------YARSLFDQIP 426
L C+SLR L QLHA+A+K L P FV RL+ C ++ YAR +FD+IP
Sbjct: 35 LPHCTSLRALAQLHAVAVKAGGGLQAHPAFVTRLLTLCTEQGAEAPAHLAYARQVFDRIP 94
Query: 425 HP-DSVLFNVLSRGYARSHH----PLRSVSLFAQMLLSGVAPDAYSFPALLKACATARAL 261
HP D V +N L RGYAR + +F +M+ GVAPD Y+F +LLKACA+ARA
Sbjct: 95 HPGDVVWYNTLLRGYARGGGGGGGAEEAARVFVRMMEEGVAPDTYTFVSLLKACASARAG 154
Query: 260 PEGRQAHAAALKLGLADNAYVLPTLISMYAECSDLDAARGVFCREGARCVVSYNSLITAC 81
EGRQAH A+K G A++ YV PTLI+MYAEC D+ AAR +F R CVVSYN++ITA
Sbjct: 155 EEGRQAHGVAVKAGAAEHEYVAPTLINMYAECGDVRAARVMFDRMDGECVVSYNAMITAS 214
Query: 80 VRSSRPGEALALFREMQAKALGPTDV 3
VRSS PGEAL LFREMQAK L PT V
Sbjct: 215 VRSSLPGEALVLFREMQAKGLKPTSV 240
Score = 79.7 bits (195), Expect = 7e-13
Identities = 59/200 (29%), Positives = 97/200 (48%), Gaps = 6/200 (3%)
Frame = -1
Query: 584 LLARCSSLR---DLQQLHALAIKY---QLHHRPPFVARLIASCPPSASDYARSLFDQIPH 423
LL C+S R + +Q H +A+K + + P + + A C + AR +FD++
Sbjct: 144 LLKACASARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYAECGDVRA--ARVMFDRMDG 201
Query: 422 PDSVLFNVLSRGYARSHHPLRSVSLFAQMLLSGVAPDAYSFPALLKACATARALPEGRQA 243
V +N + RS P ++ LF +M G+ P + + ++L ACA AL GR
Sbjct: 202 ECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLISVLSACALLGALELGRWI 261
Query: 242 HAAALKLGLADNAYVLPTLISMYAECSDLDAARGVFCREGARCVVSYNSLITACVRSSRP 63
H K+ L V LI MYA+C L+ A GVF +R +++ ++ A
Sbjct: 262 HDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANHGYG 321
Query: 62 GEALALFREMQAKALGPTDV 3
EA+++F EM+ + + P DV
Sbjct: 322 REAISMFEEMKKQGMKPDDV 341