BLASTX nr result
ID: Zingiber23_contig00046899
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00046899
(321 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tpg|DAA53121.1| TPA: hypothetical protein ZEAMMB73_114002 [Zea m... 135 4e-30
tpg|DAA53120.1| TPA: hypothetical protein ZEAMMB73_114002 [Zea m... 135 4e-30
tpg|DAA53119.1| TPA: hypothetical protein ZEAMMB73_114002 [Zea m... 135 4e-30
ref|XP_002455848.1| hypothetical protein SORBIDRAFT_03g026150 [S... 131 1e-28
ref|XP_004969406.1| PREDICTED: small subunit processome componen... 130 1e-28
gb|EEE54879.1| hypothetical protein OsJ_02376 [Oryza sativa Japo... 129 4e-28
gb|EEC70970.1| hypothetical protein OsI_02594 [Oryza sativa Indi... 129 4e-28
ref|XP_004492742.1| PREDICTED: small subunit processome componen... 120 2e-25
emb|CBI17281.3| unnamed protein product [Vitis vinifera] 120 2e-25
gb|ESW35654.1| hypothetical protein PHAVU_001G253000g, partial [... 114 1e-23
gb|EMS50081.1| Small subunit processome component 20-like protei... 114 1e-23
ref|XP_006489856.1| PREDICTED: small subunit processome componen... 113 2e-23
ref|XP_006489855.1| PREDICTED: small subunit processome componen... 113 2e-23
ref|XP_006489854.1| PREDICTED: small subunit processome componen... 113 2e-23
ref|XP_003601650.1| Small subunit processome component-like prot... 113 2e-23
ref|XP_006369815.1| hypothetical protein POPTR_0001s32620g [Popu... 112 4e-23
ref|XP_004167386.1| PREDICTED: LOW QUALITY PROTEIN: small subuni... 112 4e-23
ref|XP_004139015.1| PREDICTED: small subunit processome componen... 112 4e-23
ref|XP_006421008.1| hypothetical protein CICLE_v10004117mg [Citr... 112 5e-23
ref|XP_006601933.1| PREDICTED: small subunit processome componen... 112 7e-23
>tpg|DAA53121.1| TPA: hypothetical protein ZEAMMB73_114002 [Zea mays]
Length = 883
Score = 135 bits (341), Expect = 4e-30
Identities = 69/107 (64%), Positives = 80/107 (74%)
Frame = +1
Query: 1 LAPAFDCTPSVTIITLLLHSLQKISDIAESRSRQLIPLFLKFLGYGANDNFSFESYAGHA 180
LA FDCTP+VT+ TLLL SLQ+I D+AESRSRQLIPLFL F+GY + FS +SY
Sbjct: 538 LAMDFDCTPAVTVATLLLQSLQRIPDVAESRSRQLIPLFLNFMGYDDSSIFSADSYMPEK 597
Query: 181 CQRKDWKVILKEWLNLLVRMCNAKSLYQSAVLKEVLMKRLLDDVDAE 321
C+ K WK ILKEWLNLL M NA+SLYQ L+EVL KR+LDD D E
Sbjct: 598 CKGKQWKAILKEWLNLLRLMHNARSLYQGNFLQEVLTKRVLDDSDPE 644
>tpg|DAA53120.1| TPA: hypothetical protein ZEAMMB73_114002 [Zea mays]
Length = 914
Score = 135 bits (341), Expect = 4e-30
Identities = 69/107 (64%), Positives = 80/107 (74%)
Frame = +1
Query: 1 LAPAFDCTPSVTIITLLLHSLQKISDIAESRSRQLIPLFLKFLGYGANDNFSFESYAGHA 180
LA FDCTP+VT+ TLLL SLQ+I D+AESRSRQLIPLFL F+GY + FS +SY
Sbjct: 538 LAMDFDCTPAVTVATLLLQSLQRIPDVAESRSRQLIPLFLNFMGYDDSSIFSADSYMPEK 597
Query: 181 CQRKDWKVILKEWLNLLVRMCNAKSLYQSAVLKEVLMKRLLDDVDAE 321
C+ K WK ILKEWLNLL M NA+SLYQ L+EVL KR+LDD D E
Sbjct: 598 CKGKQWKAILKEWLNLLRLMHNARSLYQGNFLQEVLTKRVLDDSDPE 644
>tpg|DAA53119.1| TPA: hypothetical protein ZEAMMB73_114002 [Zea mays]
Length = 2530
Score = 135 bits (341), Expect = 4e-30
Identities = 69/107 (64%), Positives = 80/107 (74%)
Frame = +1
Query: 1 LAPAFDCTPSVTIITLLLHSLQKISDIAESRSRQLIPLFLKFLGYGANDNFSFESYAGHA 180
LA FDCTP+VT+ TLLL SLQ+I D+AESRSRQLIPLFL F+GY + FS +SY
Sbjct: 738 LAMDFDCTPAVTVATLLLQSLQRIPDVAESRSRQLIPLFLNFMGYDDSSIFSADSYMPEK 797
Query: 181 CQRKDWKVILKEWLNLLVRMCNAKSLYQSAVLKEVLMKRLLDDVDAE 321
C+ K WK ILKEWLNLL M NA+SLYQ L+EVL KR+LDD D E
Sbjct: 798 CKGKQWKAILKEWLNLLRLMHNARSLYQGNFLQEVLTKRVLDDSDPE 844
>ref|XP_002455848.1| hypothetical protein SORBIDRAFT_03g026150 [Sorghum bicolor]
gi|241927823|gb|EES00968.1| hypothetical protein
SORBIDRAFT_03g026150 [Sorghum bicolor]
Length = 892
Score = 131 bits (329), Expect = 1e-28
Identities = 67/107 (62%), Positives = 79/107 (73%)
Frame = +1
Query: 1 LAPAFDCTPSVTIITLLLHSLQKISDIAESRSRQLIPLFLKFLGYGANDNFSFESYAGHA 180
LA FDCTP+ T+ TLLL SLQ+I D+AESRSR LIPLFL F+GY FS +SY
Sbjct: 538 LAMDFDCTPAETMATLLLQSLQRIPDVAESRSRHLIPLFLSFMGYDDGSVFSADSYMPEK 597
Query: 181 CQRKDWKVILKEWLNLLVRMCNAKSLYQSAVLKEVLMKRLLDDVDAE 321
C+ K WKVILKEWLNLL M NA+SLYQS L+EVL KR+LD+ D +
Sbjct: 598 CKGKQWKVILKEWLNLLRLMHNARSLYQSKFLQEVLTKRVLDESDPD 644
>ref|XP_004969406.1| PREDICTED: small subunit processome component 20 homolog [Setaria
italica]
Length = 2708
Score = 130 bits (328), Expect = 1e-28
Identities = 69/109 (63%), Positives = 80/109 (73%), Gaps = 2/109 (1%)
Frame = +1
Query: 1 LAPAFDCTPSVTIITLLLHSLQKISDIAESRSRQLIPLFLKFLGYGANDN--FSFESYAG 174
LA FDCTP T+ TLLL SLQ+I D+AESRSR LIPLFLKF+GY +D FS +SY
Sbjct: 819 LATDFDCTPVETMATLLLQSLQRIPDVAESRSRHLIPLFLKFMGYEYDDGSIFSADSYMP 878
Query: 175 HACQRKDWKVILKEWLNLLVRMCNAKSLYQSAVLKEVLMKRLLDDVDAE 321
C+ K WK ILKEWLNLL M NA+SLYQS VL+EVL R+LDD D +
Sbjct: 879 EKCKGKQWKAILKEWLNLLKLMHNARSLYQSKVLQEVLTTRVLDDSDPD 927
>gb|EEE54879.1| hypothetical protein OsJ_02376 [Oryza sativa Japonica Group]
Length = 2372
Score = 129 bits (324), Expect = 4e-28
Identities = 63/107 (58%), Positives = 81/107 (75%)
Frame = +1
Query: 1 LAPAFDCTPSVTIITLLLHSLQKISDIAESRSRQLIPLFLKFLGYGANDNFSFESYAGHA 180
L+ +DCTP T+ TLLL SLQKISD+AESRSR L+PLFL F+GY ++ S +SY +
Sbjct: 539 LSTNYDCTPLETVATLLLQSLQKISDVAESRSRHLVPLFLTFMGYDNSNITSVDSYISNK 598
Query: 181 CQRKDWKVILKEWLNLLVRMCNAKSLYQSAVLKEVLMKRLLDDVDAE 321
C+ K WK ILKEWLN+L M NA+SLYQS +L+EVL KR+LD+ D +
Sbjct: 599 CKGKQWKTILKEWLNVLRLMRNARSLYQSKILQEVLTKRVLDESDPD 645
>gb|EEC70970.1| hypothetical protein OsI_02594 [Oryza sativa Indica Group]
Length = 2389
Score = 129 bits (324), Expect = 4e-28
Identities = 63/107 (58%), Positives = 81/107 (75%)
Frame = +1
Query: 1 LAPAFDCTPSVTIITLLLHSLQKISDIAESRSRQLIPLFLKFLGYGANDNFSFESYAGHA 180
L+ +DCTP T+ TLLL SLQKISD+AESRSR L+PLFL F+GY ++ S +SY +
Sbjct: 539 LSTNYDCTPLETVATLLLQSLQKISDVAESRSRHLVPLFLTFMGYDNSNITSVDSYISNK 598
Query: 181 CQRKDWKVILKEWLNLLVRMCNAKSLYQSAVLKEVLMKRLLDDVDAE 321
C+ K WK ILKEWLN+L M NA+SLYQS +L+EVL KR+LD+ D +
Sbjct: 599 CKGKQWKTILKEWLNVLRLMRNARSLYQSKILQEVLTKRVLDESDPD 645
>ref|XP_004492742.1| PREDICTED: small subunit processome component 20 homolog [Cicer
arietinum]
Length = 2700
Score = 120 bits (301), Expect = 2e-25
Identities = 62/103 (60%), Positives = 72/103 (69%)
Frame = +1
Query: 13 FDCTPSVTIITLLLHSLQKISDIAESRSRQLIPLFLKFLGYGANDNFSFESYAGHACQRK 192
FD TPSVTI+TLLL +LQKI + E RSRQ IPLFLKFLGY D S + HAC+ K
Sbjct: 831 FDSTPSVTILTLLLQALQKIPTVIEPRSRQFIPLFLKFLGYNTLDLASVGLFDSHACKGK 890
Query: 193 DWKVILKEWLNLLVRMCNAKSLYQSAVLKEVLMKRLLDDVDAE 321
+WK ILKEWLNLL M N KS Y + LKEVL RL+++ D E
Sbjct: 891 EWKTILKEWLNLLKLMKNPKSFYFNQFLKEVLQNRLIEEDDPE 933
>emb|CBI17281.3| unnamed protein product [Vitis vinifera]
Length = 2629
Score = 120 bits (301), Expect = 2e-25
Identities = 61/105 (58%), Positives = 75/105 (71%)
Frame = +1
Query: 7 PAFDCTPSVTIITLLLHSLQKISDIAESRSRQLIPLFLKFLGYGANDNFSFESYAGHACQ 186
PA D TP T+++LLL LQKI + ESRSR++IP FLKFLGY +D S S+ HAC+
Sbjct: 804 PASDSTPCATVLSLLLRCLQKIPVVVESRSRKIIPSFLKFLGYANDDIMSVGSFHTHACK 863
Query: 187 RKDWKVILKEWLNLLVRMCNAKSLYQSAVLKEVLMKRLLDDVDAE 321
K+WK +LKEWLNLL M N KS Y+S LK+VL RLLD+ DAE
Sbjct: 864 GKEWKGVLKEWLNLLRVMRNPKSFYRSQFLKDVLQNRLLDENDAE 908
>gb|ESW35654.1| hypothetical protein PHAVU_001G253000g, partial [Phaseolus vulgaris]
Length = 2722
Score = 114 bits (286), Expect = 1e-23
Identities = 61/104 (58%), Positives = 71/104 (68%)
Frame = +1
Query: 10 AFDCTPSVTIITLLLHSLQKISDIAESRSRQLIPLFLKFLGYGANDNFSFESYAGHACQR 189
A D TP+VTI+ LLL +LQKI + E RSRQLIPLFLKFLGY D S + +C+
Sbjct: 866 ASDSTPTVTILALLLQALQKIPTVIEPRSRQLIPLFLKFLGYNTLDIASVGLFDSGSCEG 925
Query: 190 KDWKVILKEWLNLLVRMCNAKSLYQSAVLKEVLMKRLLDDVDAE 321
K+WK ILKEWLNLL M N KS Y S LKEVL RLL++ D E
Sbjct: 926 KEWKTILKEWLNLLKLMKNPKSFYCSQFLKEVLQNRLLEENDPE 969
>gb|EMS50081.1| Small subunit processome component 20-like protein [Triticum urartu]
Length = 2665
Score = 114 bits (286), Expect = 1e-23
Identities = 58/107 (54%), Positives = 75/107 (70%)
Frame = +1
Query: 1 LAPAFDCTPSVTIITLLLHSLQKISDIAESRSRQLIPLFLKFLGYGANDNFSFESYAGHA 180
LA FD TP TI TLLL +LQKI D+AES SR ++PLFL F+GY S +SY
Sbjct: 809 LATDFDYTPLETIATLLLQALQKIPDVAESCSRHVVPLFLNFMGYTDGSITSVDSYMSDK 868
Query: 181 CQRKDWKVILKEWLNLLVRMCNAKSLYQSAVLKEVLMKRLLDDVDAE 321
C+ K WK+ILKEWLNLL M NA+SL QS +++E+L +R+LD+ D +
Sbjct: 869 CKGKQWKMILKEWLNLLRAMRNARSLSQSKIIQEILTERVLDESDPD 915
>ref|XP_006489856.1| PREDICTED: small subunit processome component 20 homolog isoform X3
[Citrus sinensis]
Length = 2306
Score = 113 bits (283), Expect = 2e-23
Identities = 56/107 (52%), Positives = 75/107 (70%)
Frame = +1
Query: 1 LAPAFDCTPSVTIITLLLHSLQKISDIAESRSRQLIPLFLKFLGYGANDNFSFESYAGHA 180
++PA D TP T+++LLL SLQKI + E++SRQ+IPLFL FL Y ++ S S+
Sbjct: 438 VSPASDSTPHGTVLSLLLQSLQKIPSVVEAQSRQVIPLFLDFLAYNIDNLVSVRSFNSSI 497
Query: 181 CQRKDWKVILKEWLNLLVRMCNAKSLYQSAVLKEVLMKRLLDDVDAE 321
C+ K+WK +LKEWLNLL M N K+ Y+S LK+VL RLLD+ DAE
Sbjct: 498 CKGKEWKSVLKEWLNLLKLMRNPKTFYKSQFLKDVLQNRLLDENDAE 544
>ref|XP_006489855.1| PREDICTED: small subunit processome component 20 homolog isoform X2
[Citrus sinensis]
Length = 2702
Score = 113 bits (283), Expect = 2e-23
Identities = 56/107 (52%), Positives = 75/107 (70%)
Frame = +1
Query: 1 LAPAFDCTPSVTIITLLLHSLQKISDIAESRSRQLIPLFLKFLGYGANDNFSFESYAGHA 180
++PA D TP T+++LLL SLQKI + E++SRQ+IPLFL FL Y ++ S S+
Sbjct: 834 VSPASDSTPHGTVLSLLLQSLQKIPSVVEAQSRQVIPLFLDFLAYNIDNLVSVRSFNSSI 893
Query: 181 CQRKDWKVILKEWLNLLVRMCNAKSLYQSAVLKEVLMKRLLDDVDAE 321
C+ K+WK +LKEWLNLL M N K+ Y+S LK+VL RLLD+ DAE
Sbjct: 894 CKGKEWKSVLKEWLNLLKLMRNPKTFYKSQFLKDVLQNRLLDENDAE 940
>ref|XP_006489854.1| PREDICTED: small subunit processome component 20 homolog isoform X1
[Citrus sinensis]
Length = 2703
Score = 113 bits (283), Expect = 2e-23
Identities = 56/107 (52%), Positives = 75/107 (70%)
Frame = +1
Query: 1 LAPAFDCTPSVTIITLLLHSLQKISDIAESRSRQLIPLFLKFLGYGANDNFSFESYAGHA 180
++PA D TP T+++LLL SLQKI + E++SRQ+IPLFL FL Y ++ S S+
Sbjct: 835 VSPASDSTPHGTVLSLLLQSLQKIPSVVEAQSRQVIPLFLDFLAYNIDNLVSVRSFNSSI 894
Query: 181 CQRKDWKVILKEWLNLLVRMCNAKSLYQSAVLKEVLMKRLLDDVDAE 321
C+ K+WK +LKEWLNLL M N K+ Y+S LK+VL RLLD+ DAE
Sbjct: 895 CKGKEWKSVLKEWLNLLKLMRNPKTFYKSQFLKDVLQNRLLDENDAE 941
>ref|XP_003601650.1| Small subunit processome component-like protein [Medicago truncatula]
gi|355490698|gb|AES71901.1| Small subunit processome
component-like protein [Medicago truncatula]
Length = 2733
Score = 113 bits (283), Expect = 2e-23
Identities = 60/102 (58%), Positives = 71/102 (69%)
Frame = +1
Query: 16 DCTPSVTIITLLLHSLQKISDIAESRSRQLIPLFLKFLGYGANDNFSFESYAGHACQRKD 195
DCTPS TI+TLLL +LQKI + E RSRQ IPLFLKFLGY D S + HAC+ K+
Sbjct: 847 DCTPSGTILTLLLQALQKIPTVIEPRSRQFIPLFLKFLGYNTLDLASVGLFDSHACKGKE 906
Query: 196 WKVILKEWLNLLVRMCNAKSLYQSAVLKEVLMKRLLDDVDAE 321
WK+ILKEWLNLL M N KS Y S LKE+L L+++ D E
Sbjct: 907 WKLILKEWLNLLKLMKNPKSFYLSQFLKEIL---LIEEDDPE 945
>ref|XP_006369815.1| hypothetical protein POPTR_0001s32620g [Populus trichocarpa]
gi|550348719|gb|ERP66384.1| hypothetical protein
POPTR_0001s32620g [Populus trichocarpa]
Length = 2597
Score = 112 bits (281), Expect = 4e-23
Identities = 56/105 (53%), Positives = 73/105 (69%)
Frame = +1
Query: 1 LAPAFDCTPSVTIITLLLHSLQKISDIAESRSRQLIPLFLKFLGYGANDNFSFESYAGHA 180
+ P D TP T+++ LL +LQKI +AESRSRQ+IPLFLKFLGY ND S +
Sbjct: 723 VTPVSDSTPCATVLSSLLQTLQKIPSVAESRSRQIIPLFLKFLGYNNNDLASVGLFNPVT 782
Query: 181 CQRKDWKVILKEWLNLLVRMCNAKSLYQSAVLKEVLMKRLLDDVD 315
C+ K+WK ILKEWLNLL M N+K+ YQ+ +K+VL RL+D+ D
Sbjct: 783 CKGKEWKGILKEWLNLLKLMRNSKAFYQNQFVKDVLQTRLIDEDD 827
>ref|XP_004167386.1| PREDICTED: LOW QUALITY PROTEIN: small subunit processome component 20
homolog, partial [Cucumis sativus]
Length = 2538
Score = 112 bits (281), Expect = 4e-23
Identities = 56/107 (52%), Positives = 77/107 (71%)
Frame = +1
Query: 1 LAPAFDCTPSVTIITLLLHSLQKISDIAESRSRQLIPLFLKFLGYGANDNFSFESYAGHA 180
+ P+ D TP T+++L+L SLQK S I ES+S++++PLFL FLGY S +S+ +A
Sbjct: 706 VVPSTDSTPLFTLLSLVLQSLQKNSTIVESQSQRMLPLFLTFLGYSTGHVDSVDSFKQYA 765
Query: 181 CQRKDWKVILKEWLNLLVRMCNAKSLYQSAVLKEVLMKRLLDDVDAE 321
C+ K+WK +LKEWLNLL + N KS ++S LKEVL +RLLDD DAE
Sbjct: 766 CKSKEWKCVLKEWLNLLRKTRNLKSFHKSDFLKEVLEQRLLDDNDAE 812
>ref|XP_004139015.1| PREDICTED: small subunit processome component 20 homolog [Cucumis
sativus]
Length = 2696
Score = 112 bits (281), Expect = 4e-23
Identities = 56/107 (52%), Positives = 77/107 (71%)
Frame = +1
Query: 1 LAPAFDCTPSVTIITLLLHSLQKISDIAESRSRQLIPLFLKFLGYGANDNFSFESYAGHA 180
+ P+ D TP T+++L+L SLQK S I ES+S++++PLFL FLGY S +S+ +A
Sbjct: 864 VVPSTDSTPLFTLLSLVLQSLQKNSTIVESQSQRMLPLFLTFLGYSTGHVDSVDSFKQYA 923
Query: 181 CQRKDWKVILKEWLNLLVRMCNAKSLYQSAVLKEVLMKRLLDDVDAE 321
C+ K+WK +LKEWLNLL + N KS ++S LKEVL +RLLDD DAE
Sbjct: 924 CKSKEWKCVLKEWLNLLRKTRNLKSFHKSDFLKEVLEQRLLDDNDAE 970
>ref|XP_006421008.1| hypothetical protein CICLE_v10004117mg [Citrus clementina]
gi|557522881|gb|ESR34248.1| hypothetical protein
CICLE_v10004117mg [Citrus clementina]
Length = 2651
Score = 112 bits (280), Expect = 5e-23
Identities = 55/107 (51%), Positives = 75/107 (70%)
Frame = +1
Query: 1 LAPAFDCTPSVTIITLLLHSLQKISDIAESRSRQLIPLFLKFLGYGANDNFSFESYAGHA 180
++PA D TP T+++LLL SLQK+ + E++SRQ+IPLFL FL Y ++ S S+
Sbjct: 807 VSPASDSTPHGTVLSLLLQSLQKVPSVVEAQSRQVIPLFLDFLAYNIDNLVSVGSFNSSI 866
Query: 181 CQRKDWKVILKEWLNLLVRMCNAKSLYQSAVLKEVLMKRLLDDVDAE 321
C+ K+WK +LKEWLNLL M N K+ Y+S LK+VL RLLD+ DAE
Sbjct: 867 CKGKEWKSVLKEWLNLLKLMRNPKTFYKSQFLKDVLQNRLLDENDAE 913
>ref|XP_006601933.1| PREDICTED: small subunit processome component 20 homolog [Glycine
max]
Length = 2696
Score = 112 bits (279), Expect = 7e-23
Identities = 61/104 (58%), Positives = 70/104 (67%)
Frame = +1
Query: 10 AFDCTPSVTIITLLLHSLQKISDIAESRSRQLIPLFLKFLGYGANDNFSFESYAGHACQR 189
A D TPSVTI+ LLL +LQKI + E RSRQ IPLFLKFLGY D S + HAC+
Sbjct: 838 ASDSTPSVTILALLLQALQKIPTVIEPRSRQFIPLFLKFLGYP--DLVSVGLFDSHACKG 895
Query: 190 KDWKVILKEWLNLLVRMCNAKSLYQSAVLKEVLMKRLLDDVDAE 321
K+WK ILKEWLNLL M N KS Y LK+VL RLL++ D E
Sbjct: 896 KEWKAILKEWLNLLKLMKNPKSFYCGQFLKDVLQHRLLEENDTE 939