BLASTX nr result
ID: Zingiber23_contig00046891
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00046891
(227 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABY21316.1| LIM1 [Lilium longiflorum] 135 4e-30
ref|NP_001104937.2| LOC541782 [Zea mays] gi|315228351|gb|AAF6783... 134 1e-29
gb|ACG34183.1| pollen-specific protein SF3 [Zea mays] 134 1e-29
gb|ACG33608.1| pollen-specific protein SF3 [Zea mays] gi|1956455... 134 1e-29
ref|XP_006664058.1| PREDICTED: pollen-specific protein SF3-like ... 134 2e-29
ref|XP_002313186.2| hypothetical protein POPTR_0009s09040g [Popu... 134 2e-29
gb|ABK95336.1| unknown [Populus trichocarpa] 134 2e-29
gb|ABK58464.1| LIM domain protein GLIM1a [Populus tremula x Popu... 134 2e-29
gb|ABA99040.1| Pollen-specific protein SF3, putative, expressed ... 133 2e-29
ref|XP_002298780.2| hypothetical protein POPTR_0001s30020g [Popu... 133 3e-29
gb|ABK94586.1| unknown [Populus trichocarpa] 133 3e-29
ref|XP_003576026.1| PREDICTED: pollen-specific protein SF3-like ... 132 6e-29
ref|XP_006422808.1| hypothetical protein CICLE_v10029316mg [Citr... 130 1e-28
ref|XP_002442217.1| hypothetical protein SORBIDRAFT_08g016450 [S... 130 1e-28
ref|XP_002532425.1| Cysteine and glycine-rich protein, putative ... 130 1e-28
ref|XP_004962903.1| PREDICTED: pollen-specific protein SF3-like ... 130 2e-28
gb|ABW69660.1| transcription factor LIM [Triticum aestivum] 130 2e-28
gb|ABK58465.1| LIM domain protein GLIM1b [Populus tremula x Popu... 129 4e-28
ref|XP_006857164.1| hypothetical protein AMTR_s00065p00168710 [A... 129 5e-28
dbj|BAJ94823.1| predicted protein [Hordeum vulgare subsp. vulgare] 129 5e-28
>gb|ABY21316.1| LIM1 [Lilium longiflorum]
Length = 181
Score = 135 bits (341), Expect = 4e-30
Identities = 59/75 (78%), Positives = 65/75 (86%)
Frame = +1
Query: 1 GSLDKSFEGIPKVVKPEKPVDTENASRVSSAFVGTKEKCVGCEKTVYPTERVKVNGAAYH 180
GSL+KSFEG PK+VKPEKP+ TENA++VS AF GTKEKCVGC+KTVYP ERV VNG YH
Sbjct: 70 GSLEKSFEGTPKIVKPEKPIGTENANKVSGAFAGTKEKCVGCQKTVYPIERVTVNGTCYH 129
Query: 181 KSCFKCCHGGCVISP 225
KSCFKC HGGC ISP
Sbjct: 130 KSCFKCAHGGCTISP 144
>ref|NP_001104937.2| LOC541782 [Zea mays] gi|315228351|gb|AAF67835.2|AF135591_1 LIM
transcription factor homolog [Zea mays]
Length = 197
Score = 134 bits (337), Expect = 1e-29
Identities = 60/75 (80%), Positives = 64/75 (85%)
Frame = +1
Query: 1 GSLDKSFEGIPKVVKPEKPVDTENASRVSSAFVGTKEKCVGCEKTVYPTERVKVNGAAYH 180
GSLDKSFEG PKVVKPE+ V ENA++VSSAF GT+EKCVGC KTVYPTERV VN YH
Sbjct: 72 GSLDKSFEGTPKVVKPERNVGNENATKVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYH 131
Query: 181 KSCFKCCHGGCVISP 225
KSCFKCCHGGC ISP
Sbjct: 132 KSCFKCCHGGCTISP 146
>gb|ACG34183.1| pollen-specific protein SF3 [Zea mays]
Length = 195
Score = 134 bits (337), Expect = 1e-29
Identities = 60/75 (80%), Positives = 64/75 (85%)
Frame = +1
Query: 1 GSLDKSFEGIPKVVKPEKPVDTENASRVSSAFVGTKEKCVGCEKTVYPTERVKVNGAAYH 180
GSLDKSFEG PKVVKPE+ V ENA++VSSAF GT+EKCVGC KTVYPTERV VN YH
Sbjct: 72 GSLDKSFEGTPKVVKPERNVGNENATKVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYH 131
Query: 181 KSCFKCCHGGCVISP 225
KSCFKCCHGGC ISP
Sbjct: 132 KSCFKCCHGGCTISP 146
>gb|ACG33608.1| pollen-specific protein SF3 [Zea mays] gi|195645500|gb|ACG42218.1|
pollen-specific protein SF3 [Zea mays]
gi|195654645|gb|ACG46790.1| pollen-specific protein SF3
[Zea mays] gi|195656225|gb|ACG47580.1| pollen-specific
protein SF3 [Zea mays] gi|219887333|gb|ACL54041.1|
unknown [Zea mays] gi|413942014|gb|AFW74663.1| putative
LIM-type zinc finger domain family protein [Zea mays]
Length = 195
Score = 134 bits (337), Expect = 1e-29
Identities = 60/75 (80%), Positives = 64/75 (85%)
Frame = +1
Query: 1 GSLDKSFEGIPKVVKPEKPVDTENASRVSSAFVGTKEKCVGCEKTVYPTERVKVNGAAYH 180
GSLDKSFEG PKVVKPE+ V ENA++VSSAF GT+EKCVGC KTVYPTERV VN YH
Sbjct: 72 GSLDKSFEGTPKVVKPERNVGNENATKVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYH 131
Query: 181 KSCFKCCHGGCVISP 225
KSCFKCCHGGC ISP
Sbjct: 132 KSCFKCCHGGCTISP 146
>ref|XP_006664058.1| PREDICTED: pollen-specific protein SF3-like [Oryza brachyantha]
Length = 195
Score = 134 bits (336), Expect = 2e-29
Identities = 60/75 (80%), Positives = 63/75 (84%)
Frame = +1
Query: 1 GSLDKSFEGIPKVVKPEKPVDTENASRVSSAFVGTKEKCVGCEKTVYPTERVKVNGAAYH 180
GSLDKSFEG PKVVKPEK V+ ENA +VSSAF GT+EKCVGC KTVYP ERV VN YH
Sbjct: 72 GSLDKSFEGTPKVVKPEKTVENENAMKVSSAFAGTREKCVGCNKTVYPIERVTVNNTMYH 131
Query: 181 KSCFKCCHGGCVISP 225
KSCFKCCHGGC ISP
Sbjct: 132 KSCFKCCHGGCTISP 146
>ref|XP_002313186.2| hypothetical protein POPTR_0009s09040g [Populus trichocarpa]
gi|118483314|gb|ABK93559.1| unknown [Populus
trichocarpa] gi|550331361|gb|EEE87141.2| hypothetical
protein POPTR_0009s09040g [Populus trichocarpa]
Length = 195
Score = 134 bits (336), Expect = 2e-29
Identities = 58/75 (77%), Positives = 65/75 (86%)
Frame = +1
Query: 1 GSLDKSFEGIPKVVKPEKPVDTENASRVSSAFVGTKEKCVGCEKTVYPTERVKVNGAAYH 180
GSLDKSFEG PK+VKPEKPVD ENAS+VS+ F GT+EKCVGC+KTVYP E+V VNG YH
Sbjct: 71 GSLDKSFEGTPKIVKPEKPVDNENASKVSNLFAGTREKCVGCDKTVYPIEKVTVNGTPYH 130
Query: 181 KSCFKCCHGGCVISP 225
+SCFKC HGGC ISP
Sbjct: 131 RSCFKCTHGGCTISP 145
>gb|ABK95336.1| unknown [Populus trichocarpa]
Length = 195
Score = 134 bits (336), Expect = 2e-29
Identities = 58/75 (77%), Positives = 65/75 (86%)
Frame = +1
Query: 1 GSLDKSFEGIPKVVKPEKPVDTENASRVSSAFVGTKEKCVGCEKTVYPTERVKVNGAAYH 180
GSLDKSFEG PK+VKPEKPVD ENAS+VS+ F GT+EKCVGC+KTVYP E+V VNG YH
Sbjct: 71 GSLDKSFEGTPKIVKPEKPVDNENASKVSNLFAGTREKCVGCDKTVYPIEKVTVNGTPYH 130
Query: 181 KSCFKCCHGGCVISP 225
+SCFKC HGGC ISP
Sbjct: 131 RSCFKCTHGGCTISP 145
>gb|ABK58464.1| LIM domain protein GLIM1a [Populus tremula x Populus alba]
Length = 195
Score = 134 bits (336), Expect = 2e-29
Identities = 58/75 (77%), Positives = 65/75 (86%)
Frame = +1
Query: 1 GSLDKSFEGIPKVVKPEKPVDTENASRVSSAFVGTKEKCVGCEKTVYPTERVKVNGAAYH 180
GSLDKSFEG PK+VKPEKPVD ENAS+VS+ F GT+EKCVGC+KTVYP E+V VNG YH
Sbjct: 71 GSLDKSFEGTPKIVKPEKPVDNENASKVSNLFAGTREKCVGCDKTVYPIEKVTVNGTPYH 130
Query: 181 KSCFKCCHGGCVISP 225
+SCFKC HGGC ISP
Sbjct: 131 RSCFKCTHGGCTISP 145
>gb|ABA99040.1| Pollen-specific protein SF3, putative, expressed [Oryza sativa
Japonica Group] gi|125579493|gb|EAZ20639.1| hypothetical
protein OsJ_36255 [Oryza sativa Japonica Group]
Length = 195
Score = 133 bits (335), Expect = 2e-29
Identities = 60/75 (80%), Positives = 63/75 (84%)
Frame = +1
Query: 1 GSLDKSFEGIPKVVKPEKPVDTENASRVSSAFVGTKEKCVGCEKTVYPTERVKVNGAAYH 180
GSLDKSFEG PKVVKPEK V+ ENA +VSSAF GT+EKCVGC KTVYP ERV VN YH
Sbjct: 72 GSLDKSFEGTPKVVKPEKTVENENAIKVSSAFAGTREKCVGCNKTVYPIERVTVNNTMYH 131
Query: 181 KSCFKCCHGGCVISP 225
KSCFKCCHGGC ISP
Sbjct: 132 KSCFKCCHGGCTISP 146
>ref|XP_002298780.2| hypothetical protein POPTR_0001s30020g [Populus trichocarpa]
gi|550348524|gb|EEE83585.2| hypothetical protein
POPTR_0001s30020g [Populus trichocarpa]
Length = 196
Score = 133 bits (334), Expect = 3e-29
Identities = 58/75 (77%), Positives = 64/75 (85%)
Frame = +1
Query: 1 GSLDKSFEGIPKVVKPEKPVDTENASRVSSAFVGTKEKCVGCEKTVYPTERVKVNGAAYH 180
GSLDKSFEG PK+VKPEKPVD ENAS+VS+ F GT+EKCVGC KTVYP E+V VNG YH
Sbjct: 71 GSLDKSFEGTPKIVKPEKPVDNENASKVSNLFAGTREKCVGCNKTVYPIEKVTVNGTPYH 130
Query: 181 KSCFKCCHGGCVISP 225
+SCFKC HGGC ISP
Sbjct: 131 RSCFKCTHGGCTISP 145
>gb|ABK94586.1| unknown [Populus trichocarpa]
Length = 196
Score = 133 bits (334), Expect = 3e-29
Identities = 58/75 (77%), Positives = 64/75 (85%)
Frame = +1
Query: 1 GSLDKSFEGIPKVVKPEKPVDTENASRVSSAFVGTKEKCVGCEKTVYPTERVKVNGAAYH 180
GSLDKSFEG PK+VKPEKPVD ENAS+VS+ F GT+EKCVGC KTVYP E+V VNG YH
Sbjct: 71 GSLDKSFEGTPKIVKPEKPVDNENASKVSNLFAGTREKCVGCNKTVYPIEKVTVNGTQYH 130
Query: 181 KSCFKCCHGGCVISP 225
+SCFKC HGGC ISP
Sbjct: 131 RSCFKCTHGGCTISP 145
>ref|XP_003576026.1| PREDICTED: pollen-specific protein SF3-like [Brachypodium
distachyon]
Length = 196
Score = 132 bits (331), Expect = 6e-29
Identities = 59/75 (78%), Positives = 63/75 (84%)
Frame = +1
Query: 1 GSLDKSFEGIPKVVKPEKPVDTENASRVSSAFVGTKEKCVGCEKTVYPTERVKVNGAAYH 180
GSLDKSFEG PKVVKPE+ V+ ENA +VSSAF GT+EKCVGC KTVYP ERV VN YH
Sbjct: 72 GSLDKSFEGTPKVVKPERNVENENAIKVSSAFAGTREKCVGCNKTVYPIERVTVNNTMYH 131
Query: 181 KSCFKCCHGGCVISP 225
KSCFKCCHGGC ISP
Sbjct: 132 KSCFKCCHGGCTISP 146
>ref|XP_006422808.1| hypothetical protein CICLE_v10029316mg [Citrus clementina]
gi|568867165|ref|XP_006486914.1| PREDICTED:
pollen-specific protein SF3-like [Citrus sinensis]
gi|557524742|gb|ESR36048.1| hypothetical protein
CICLE_v10029316mg [Citrus clementina]
Length = 197
Score = 130 bits (328), Expect = 1e-28
Identities = 56/75 (74%), Positives = 67/75 (89%)
Frame = +1
Query: 1 GSLDKSFEGIPKVVKPEKPVDTENASRVSSAFVGTKEKCVGCEKTVYPTERVKVNGAAYH 180
GSL+KSFEG PK+VKPEK V+ ENA +VS+ FVGT++KCVGC++TVYPTE+V VNGAAYH
Sbjct: 72 GSLEKSFEGTPKIVKPEKLVENENAQKVSNKFVGTRDKCVGCDRTVYPTEKVSVNGAAYH 131
Query: 181 KSCFKCCHGGCVISP 225
+SCFKC HGGC ISP
Sbjct: 132 RSCFKCSHGGCTISP 146
>ref|XP_002442217.1| hypothetical protein SORBIDRAFT_08g016450 [Sorghum bicolor]
gi|241942910|gb|EES16055.1| hypothetical protein
SORBIDRAFT_08g016450 [Sorghum bicolor]
Length = 194
Score = 130 bits (328), Expect = 1e-28
Identities = 59/75 (78%), Positives = 62/75 (82%)
Frame = +1
Query: 1 GSLDKSFEGIPKVVKPEKPVDTENASRVSSAFVGTKEKCVGCEKTVYPTERVKVNGAAYH 180
GSLDKSFEG PKVVKPE+ V ENA +VSSAF GT+EKCVGC KTVYP ERV VN YH
Sbjct: 72 GSLDKSFEGTPKVVKPERNVGNENAVKVSSAFAGTREKCVGCSKTVYPIERVTVNNTMYH 131
Query: 181 KSCFKCCHGGCVISP 225
KSCFKCCHGGC ISP
Sbjct: 132 KSCFKCCHGGCTISP 146
>ref|XP_002532425.1| Cysteine and glycine-rich protein, putative [Ricinus communis]
gi|223527874|gb|EEF29966.1| Cysteine and glycine-rich
protein, putative [Ricinus communis]
Length = 196
Score = 130 bits (328), Expect = 1e-28
Identities = 57/75 (76%), Positives = 64/75 (85%)
Frame = +1
Query: 1 GSLDKSFEGIPKVVKPEKPVDTENASRVSSAFVGTKEKCVGCEKTVYPTERVKVNGAAYH 180
GSLDKSFEG PKV KPEKP+D+ENAS+VS+ F GT+EKCVGC KTVYP ERV VNG YH
Sbjct: 72 GSLDKSFEGTPKVAKPEKPIDSENASKVSNKFAGTREKCVGCSKTVYPIERVTVNGTPYH 131
Query: 181 KSCFKCCHGGCVISP 225
+SCFKC +GGC ISP
Sbjct: 132 RSCFKCTYGGCTISP 146
>ref|XP_004962903.1| PREDICTED: pollen-specific protein SF3-like [Setaria italica]
Length = 195
Score = 130 bits (327), Expect = 2e-28
Identities = 58/75 (77%), Positives = 62/75 (82%)
Frame = +1
Query: 1 GSLDKSFEGIPKVVKPEKPVDTENASRVSSAFVGTKEKCVGCEKTVYPTERVKVNGAAYH 180
GSLDKSFEG PKVVKPE+ V+ ENA +VSS F GT+EKCVGC KTVYP ERV VN YH
Sbjct: 72 GSLDKSFEGTPKVVKPERNVENENAIKVSSVFAGTREKCVGCSKTVYPIERVTVNNTMYH 131
Query: 181 KSCFKCCHGGCVISP 225
KSCFKCCHGGC ISP
Sbjct: 132 KSCFKCCHGGCTISP 146
>gb|ABW69660.1| transcription factor LIM [Triticum aestivum]
Length = 196
Score = 130 bits (326), Expect = 2e-28
Identities = 58/75 (77%), Positives = 62/75 (82%)
Frame = +1
Query: 1 GSLDKSFEGIPKVVKPEKPVDTENASRVSSAFVGTKEKCVGCEKTVYPTERVKVNGAAYH 180
GSLDKSFEG PKVVKPE+ V ENA++VSSAF GT+EKC GC KTVYP ERV VN YH
Sbjct: 72 GSLDKSFEGTPKVVKPERNVGNENATKVSSAFAGTREKCFGCSKTVYPIERVTVNNTMYH 131
Query: 181 KSCFKCCHGGCVISP 225
KSCFKCCHGGC ISP
Sbjct: 132 KSCFKCCHGGCTISP 146
>gb|ABK58465.1| LIM domain protein GLIM1b [Populus tremula x Populus alba]
Length = 196
Score = 129 bits (324), Expect = 4e-28
Identities = 55/75 (73%), Positives = 62/75 (82%)
Frame = +1
Query: 1 GSLDKSFEGIPKVVKPEKPVDTENASRVSSAFVGTKEKCVGCEKTVYPTERVKVNGAAYH 180
GSLDKSFEG PK+ KPEKPVD ENAS+VS+ F GT+EKCVGC KTVYP E+V VNG YH
Sbjct: 71 GSLDKSFEGTPKIAKPEKPVDNENASKVSNLFAGTREKCVGCNKTVYPIEKVTVNGTPYH 130
Query: 181 KSCFKCCHGGCVISP 225
+ CFKC HGGC +SP
Sbjct: 131 RRCFKCTHGGCTVSP 145
>ref|XP_006857164.1| hypothetical protein AMTR_s00065p00168710 [Amborella trichopoda]
gi|548861247|gb|ERN18631.1| hypothetical protein
AMTR_s00065p00168710 [Amborella trichopoda]
Length = 193
Score = 129 bits (323), Expect = 5e-28
Identities = 56/76 (73%), Positives = 66/76 (86%), Gaps = 1/76 (1%)
Frame = +1
Query: 1 GSLDKSFEGIPKVVKPEKPVDTEN-ASRVSSAFVGTKEKCVGCEKTVYPTERVKVNGAAY 177
GSLDKSFEG PK+ KPEKP+D+E +RVS F GT++KCVGC+KTVYP E+V V+G+AY
Sbjct: 70 GSLDKSFEGTPKIAKPEKPIDSEGQGARVSGLFAGTRDKCVGCKKTVYPIEKVAVDGSAY 129
Query: 178 HKSCFKCCHGGCVISP 225
HKSCFKCCHGGCVISP
Sbjct: 130 HKSCFKCCHGGCVISP 145
>dbj|BAJ94823.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 196
Score = 129 bits (323), Expect = 5e-28
Identities = 58/75 (77%), Positives = 61/75 (81%)
Frame = +1
Query: 1 GSLDKSFEGIPKVVKPEKPVDTENASRVSSAFVGTKEKCVGCEKTVYPTERVKVNGAAYH 180
GSLDKSFEG PKVVKPE+ V ENA +VSSAF GT+EKC GC KTVYP ERV VN YH
Sbjct: 72 GSLDKSFEGTPKVVKPERNVGNENAIKVSSAFAGTREKCFGCSKTVYPIERVTVNNTMYH 131
Query: 181 KSCFKCCHGGCVISP 225
KSCFKCCHGGC ISP
Sbjct: 132 KSCFKCCHGGCTISP 146