BLASTX nr result
ID: Zingiber23_contig00046859
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00046859
(491 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ20321.1| hypothetical protein PRUPE_ppa015831mg, partial [... 160 2e-37
ref|XP_006467434.1| PREDICTED: pentatricopeptide repeat-containi... 147 1e-33
ref|XP_006449728.1| hypothetical protein CICLE_v10014539mg [Citr... 147 2e-33
ref|XP_006389622.1| hypothetical protein POPTR_0021s00720g [Popu... 140 2e-31
ref|XP_002316529.1| predicted protein [Populus trichocarpa] 140 2e-31
gb|EOY28704.1| Pentatricopeptide repeat superfamily protein, put... 140 2e-31
gb|ADN34051.1| pentatricopeptide repeat-containing protein [Cucu... 137 1e-30
ref|NP_172636.1| pentatricopeptide repeat-containing protein [Ar... 137 1e-30
ref|XP_002518478.1| pentatricopeptide repeat-containing protein,... 137 2e-30
ref|XP_004158042.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 134 1e-29
ref|XP_004154237.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 134 2e-29
ref|XP_002889890.1| pentatricopeptide repeat-containing protein ... 134 2e-29
ref|XP_006417324.1| hypothetical protein EUTSA_v10007012mg [Eutr... 132 5e-29
gb|EPS59350.1| hypothetical protein M569_15456, partial [Genlise... 129 5e-28
ref|XP_006306468.1| hypothetical protein CARUB_v10012420mg [Caps... 127 2e-27
ref|XP_006287082.1| hypothetical protein CARUB_v10000242mg [Caps... 108 7e-22
ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arab... 107 1e-21
ref|NP_001031033.1| pentatricopeptide repeat-containing protein ... 107 2e-21
ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selag... 106 4e-21
gb|EPS66849.1| hypothetical protein M569_07924, partial [Genlise... 105 5e-21
>gb|EMJ20321.1| hypothetical protein PRUPE_ppa015831mg, partial [Prunus persica]
Length = 480
Score = 160 bits (404), Expect = 2e-37
Identities = 78/162 (48%), Positives = 109/162 (67%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G C+ G+ +LA L +KM +S V PN+V++NC+IN CK G E ++ ++ +
Sbjct: 154 GACKMGDMELALKLLRKMGVMSGECVTPNLVSYNCIINGFCKIGSLSFAEE-IQAEMTQA 212
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
G+ SN+RTYATL+DGYAR G LE ALRL EMV+ + PN+V+YNS+++WL K+G +EEA
Sbjct: 213 GVESNLRTYATLVDGYARGGSLEVALRLCDEMVERGLTPNSVVYNSIIHWLCKEGDVEEA 272
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEALGYYKQI 487
L SD+ H PD FT +I I+G RNGL EAL ++ QI
Sbjct: 273 YLLFSDLIDRHLCPDQFTYSILINGLCRNGLVTEALRFHNQI 314
Score = 65.1 bits (157), Expect = 9e-09
Identities = 50/150 (33%), Positives = 78/150 (52%), Gaps = 5/150 (3%)
Frame = +2
Query: 35 YNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGK--SELGEHLVKRDIAKKGLLSNMRTY 208
+ L+K+M VS VE N+ TFN +I ALCK K + E+ + K G+ ++ T+
Sbjct: 95 WKLYKEM--VSYGYVE-NVNTFNLVIYALCKECKLLEAMSEYY---RMLKSGIWPSVVTF 148
Query: 209 ATLIDGYAREGKLEEALRLFIE---MVDDDIVPNTVLYNSLLNWLFKQGHIEEAGFLLSD 379
+IDG + G +E AL+L + M + + PN V YN ++N K G + A + ++
Sbjct: 149 NMIIDGACKMGDMELALKLLRKMGVMSGECVTPNLVSYNCIINGFCKIGSLSFAEEIQAE 208
Query: 380 MRKAHASPDCFTCAIAIDGYFRNGLAHEAL 469
M +A + T A +DGY R G AL
Sbjct: 209 MTQAGVESNLRTYATLVDGYARGGSLEVAL 238
Score = 63.9 bits (154), Expect = 2e-08
Identities = 43/144 (29%), Positives = 72/144 (50%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G R G ++A L +M + + PN V +N +I+ LCK G E +L+ D+ +
Sbjct: 227 GYARGGSLEVALRLCDEMV---ERGLTPNSVVYNSIIHWLCKEGDVEEA-YLLFSDLIDR 282
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
L + TY+ LI+G R G + EALR ++++ +V + +N L++++ K ++ A
Sbjct: 283 HLCPDQFTYSILINGLCRNGLVTEALRFHNQILEKSLVKDVFSHNILIDYMCKNKNLIGA 342
Query: 362 GFLLSDMRKAHASPDCFTCAIAID 433
LL M PD T ID
Sbjct: 343 MQLLGSMFVRGLLPDTVTYGTLID 366
Score = 59.7 bits (143), Expect = 4e-07
Identities = 52/171 (30%), Positives = 79/171 (46%), Gaps = 15/171 (8%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G CRNG A ++ + K+ V+ ++ + N LI+ +CK K+ +G + + +
Sbjct: 297 GLCRNGLVTEALRFHNQI--LEKSLVK-DVFSHNILIDYMCK-NKNLIGAMQLLGSMFVR 352
Query: 182 GLLSNMRTYATLID---------------GYAREGKLEEALRLFIEMVDDDIVPNTVLYN 316
GLL + TY TLID Y GK++EA LF EM + I N V YN
Sbjct: 353 GLLPDTVTYGTLIDWIDFLDIITYNTLIHAYFICGKIDEAFFLFREMEEVGISFNRVTYN 412
Query: 317 SLLNWLFKQGHIEEAGFLLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEAL 469
L+N+L K G ++A L+ M PD T I + +N E +
Sbjct: 413 ILINFLCKFGCSQQAKELMKVMISRGMVPDFITYTTLITSFSKNCSPEEVI 463
Score = 57.0 bits (136), Expect = 3e-06
Identities = 35/95 (36%), Positives = 56/95 (58%)
Frame = +2
Query: 17 GEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKKGLLSN 196
G+ D A+ LF++ME V + N VT+N LIN LCK G S+ + L+K I++ G++ +
Sbjct: 387 GKIDEAFFLFREMEEVG---ISFNRVTYNILINFLCKFGCSQQAKELMKVMISR-GMVPD 442
Query: 197 MRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPN 301
TY TLI +++ EE + L MV ++P+
Sbjct: 443 FITYTTLITSFSKNCSPEEVIELHDYMVIKGVIPD 477
>ref|XP_006467434.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11710,
mitochondrial-like isoform X1 [Citrus sinensis]
gi|568826147|ref|XP_006467435.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g11710,
mitochondrial-like isoform X2 [Citrus sinensis]
Length = 658
Score = 147 bits (371), Expect = 1e-33
Identities = 76/160 (47%), Positives = 102/160 (63%)
Frame = +2
Query: 8 CRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKKGL 187
C+ G+ + A LF+KM +S ++V PN VT NC+IN CK G+ E E ++ + K G+
Sbjct: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEE-IRYAMIKAGI 320
Query: 188 LSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEAGF 367
N+RTYATLIDGYAR G EEALRL EMV ++PN V+YNS ++WLF +G +E A F
Sbjct: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
Query: 368 LLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEALGYYKQI 487
+LSDM H PD FT +I G RNG +A + Q+
Sbjct: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
Score = 85.9 bits (211), Expect = 5e-15
Identities = 54/163 (33%), Positives = 86/163 (52%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G CRNG A+ L + V + + + ++N LIN LCK+ + L+ I +
Sbjct: 403 GLCRNGCVKQAFKLHNQ---VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR- 458
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
GL+ ++ TY TLIDGY + G +E A++++ M + PN V+YNS++N L K ++ A
Sbjct: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEALGYYKQIR 490
LL ++ D T I+GYF NG EA + ++R
Sbjct: 519 KSLLQASQRI-GLLDAITYNTLINGYFINGKIAEAFAMFSEMR 560
Score = 77.8 bits (190), Expect = 1e-12
Identities = 52/156 (33%), Positives = 81/156 (51%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G C+ G + A +++ M+ V K +PN+V +N +IN LCK + + L++ +
Sbjct: 473 GYCKGGNIEGAVQVYENMKKVEK---KPNLVIYNSIINGLCKDASLDAAKSLLQAS-QRI 528
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
GLL + TY TLI+GY GK+ EA +F EM + I N V YN L+N+L K G ++A
Sbjct: 529 GLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEAL 469
L+ M PD T + + +N E +
Sbjct: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI 623
Score = 69.3 bits (168), Expect = 5e-10
Identities = 49/163 (30%), Positives = 78/163 (47%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G R G + A L +M K + PN V +N I+ L G E G V D+ K
Sbjct: 333 GYARGGSSEEALRLCDEMV---KRGLMPNNVVYNSTIHWLFAEGDVE-GALFVLSDMIDK 388
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
+ + TY+ L G R G +++A +L +++++ +V + YN L+N+L K ++ A
Sbjct: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEALGYYKQIR 490
LLS M PD T IDGY + G A+ Y+ ++
Sbjct: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
>ref|XP_006449728.1| hypothetical protein CICLE_v10014539mg [Citrus clementina]
gi|557552339|gb|ESR62968.1| hypothetical protein
CICLE_v10014539mg [Citrus clementina]
Length = 658
Score = 147 bits (370), Expect = 2e-33
Identities = 76/160 (47%), Positives = 103/160 (64%)
Frame = +2
Query: 8 CRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKKGL 187
C+ G+ + A LF+KM +S ++V PN VT NC+IN CK G+ E E ++ + K G+
Sbjct: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEE-IRYAMIKAGI 320
Query: 188 LSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEAGF 367
N+RTYATLIDGYAR G EEALRL EMV ++PNTV+YNS ++WLF++G +E A F
Sbjct: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNTVVYNSTIHWLFEEGDVEGALF 380
Query: 368 LLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEALGYYKQI 487
+LSDM PD FT +I G RNG +A + Q+
Sbjct: 381 VLSDMIDKRICPDQFTYSILTKGLCRNGCVKQAFKLHNQV 420
Score = 82.4 bits (202), Expect = 6e-14
Identities = 53/163 (32%), Positives = 85/163 (52%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G CRNG A+ L + V + + + ++N LIN LCK+ + L+ I +
Sbjct: 403 GLCRNGCVKQAFKLHNQ---VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR- 458
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
GL+ ++ TY TLIDGY + G +E A++++ M + PN V+YNS++N L K ++ A
Sbjct: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEALGYYKQIR 490
LL ++ D T I+G F NG EA + ++R
Sbjct: 519 KSLLEASQRI-GLLDAITYNTLINGCFINGKIAEAFAMFSEMR 560
Score = 75.5 bits (184), Expect = 7e-12
Identities = 51/156 (32%), Positives = 81/156 (51%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G C+ G + A +++ M+ V K +PN+V +N +IN LCK + + L++ +
Sbjct: 473 GYCKGGNIEGAVQVYENMKKVEK---KPNLVIYNSIINGLCKDASLDAAKSLLEAS-QRI 528
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
GLL + TY TLI+G GK+ EA +F EM + +I N V YN L+N+L K G ++A
Sbjct: 529 GLLDAI-TYNTLINGCFINGKIAEAFAMFSEMRNVEIAVNKVGYNILINFLCKFGCYQQA 587
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEAL 469
L+ M PD T + + +N E +
Sbjct: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI 623
Score = 71.6 bits (174), Expect = 1e-10
Identities = 49/163 (30%), Positives = 79/163 (48%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G R G + A L +M K + PN V +N I+ L + G E G V D+ K
Sbjct: 333 GYARGGSSEEALRLCDEMV---KRGLMPNTVVYNSTIHWLFEEGDVE-GALFVLSDMIDK 388
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
+ + TY+ L G R G +++A +L +++++ +V + YN L+N+L K ++ A
Sbjct: 389 RICPDQFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEALGYYKQIR 490
LLS M PD T IDGY + G A+ Y+ ++
Sbjct: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
>ref|XP_006389622.1| hypothetical protein POPTR_0021s00720g [Populus trichocarpa]
gi|550312451|gb|ERP48536.1| hypothetical protein
POPTR_0021s00720g [Populus trichocarpa]
Length = 540
Score = 140 bits (353), Expect = 2e-31
Identities = 69/162 (42%), Positives = 104/162 (64%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G C+ G+ DLA L +KME +S +++PN VT+N LI+ CK G + E L + ++ K
Sbjct: 144 GACKMGDMDLALKLVRKMEIMSAGSIKPNSVTYNSLIDGFCKIGGITVAEEL-RNEMMKI 202
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
+ N+RTYAT+I+GY+R G LEEALRL EMV+ ++PN+V+YNS+++WL+ +G ++ A
Sbjct: 203 DIEPNVRTYATMIEGYSRAGCLEEALRLCDEMVERGLLPNSVVYNSIMHWLYMEGDVDGA 262
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEALGYYKQI 487
+ +DM D FTC+I G RNG AL + Q+
Sbjct: 263 SLVFTDMSDKQIPLDKFTCSILTRGLCRNGYITTALKFLNQV 304
Score = 81.6 bits (200), Expect = 1e-13
Identities = 51/150 (34%), Positives = 83/150 (55%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G CRNG A K + V +N + + + N LIN LCK+ L+ R + +
Sbjct: 287 GLCRNGYITTA---LKFLNQVLENNLIEDAFSHNILINFLCKSNNFAAARQLLAR-MYVR 342
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
GL+ ++ T+ TLIDG+ +EG +E A++++ +MV + PN ++YNS++N L K G ++ A
Sbjct: 343 GLVPDVVTFGTLIDGHCKEGNIESAVQVYDKMVKGEEKPNLLVYNSIINGLCKDGLVDVA 402
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDGYFRNG 451
L+ D+ + D T I+GYF G
Sbjct: 403 RSLV-DVLQRMGLVDTITYNTLINGYFNCG 431
Score = 75.1 bits (183), Expect = 9e-12
Identities = 48/156 (30%), Positives = 82/156 (52%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G C+ G + A ++ KM K +PN++ +N +IN LCK G ++ LV D+ ++
Sbjct: 357 GHCKEGNIESAVQVYDKMV---KGEEKPNLLVYNSIINGLCKDGLVDVARSLV--DVLQR 411
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
L + TY TLI+GY GK ++A +L M + I+ ++ YN+++ +L K G ++EA
Sbjct: 412 MGLVDTITYNTLINGYFNCGKFDKAFKLSTLMQNAGILASSATYNTVIKFLCKFGCVQEA 471
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEAL 469
L++ M PD T + +N A E +
Sbjct: 472 KELMTMMVLWGVLPDNITYRTLVININKNCSAEEVI 507
Score = 73.2 bits (178), Expect = 3e-11
Identities = 52/141 (36%), Positives = 76/141 (53%), Gaps = 3/141 (2%)
Frame = +2
Query: 56 EFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKKGLLSNMRTYATLIDGYAR 235
E VS +E N+ TFN +++ALCK K + + R I K G+ N+ T+ ++DG +
Sbjct: 90 EMVSYGYME-NVNTFNVVVHALCKDCKLQEALSVFYR-ILKSGIWPNVVTFNMMVDGACK 147
Query: 236 EGKLEEALRLFIE---MVDDDIVPNTVLYNSLLNWLFKQGHIEEAGFLLSDMRKAHASPD 406
G ++ AL+L + M I PN+V YNSL++ K G I A L ++M K P+
Sbjct: 148 MGDMDLALKLVRKMEIMSAGSIKPNSVTYNSLIDGFCKIGGITVAEELRNEMMKIDIEPN 207
Query: 407 CFTCAIAIDGYFRNGLAHEAL 469
T A I+GY R G EAL
Sbjct: 208 VRTYATMIEGYSRAGCLEEAL 228
Score = 55.5 bits (132), Expect = 7e-06
Identities = 36/135 (26%), Positives = 67/135 (49%)
Frame = +2
Query: 83 PNIVTFNCLINALCKAGKSELGEHLVKRDIAKKGLLSNMRTYATLIDGYAREGKLEEALR 262
PN V +N +++ L G + G LV D++ K + + T + L G R G + AL+
Sbjct: 241 PNSVVYNSIMHWLYMEGDVD-GASLVFTDMSDKQIPLDKFTCSILTRGLCRNGYITTALK 299
Query: 263 LFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEAGFLLSDMRKAHASPDCFTCAIAIDGYF 442
++++++++ + +N L+N+L K + A LL+ M PD T IDG+
Sbjct: 300 FLNQVLENNLIEDAFSHNILINFLCKSNNFAAARQLLARMYVRGLVPDVVTFGTLIDGHC 359
Query: 443 RNGLAHEALGYYKQI 487
+ G A+ Y ++
Sbjct: 360 KEGNIESAVQVYDKM 374
>ref|XP_002316529.1| predicted protein [Populus trichocarpa]
Length = 678
Score = 140 bits (353), Expect = 2e-31
Identities = 69/162 (42%), Positives = 104/162 (64%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G C+ G+ DLA L +KME +S +++PN VT+N LI+ CK G + E L + ++ K
Sbjct: 282 GACKMGDMDLALKLVRKMEIMSAGSIKPNSVTYNSLIDGFCKIGGITVAEEL-RNEMMKI 340
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
+ N+RTYAT+I+GY+R G LEEALRL EMV+ ++PN+V+YNS+++WL+ +G ++ A
Sbjct: 341 DIEPNVRTYATMIEGYSRAGCLEEALRLCDEMVERGLLPNSVVYNSIMHWLYMEGDVDGA 400
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEALGYYKQI 487
+ +DM D FTC+I G RNG AL + Q+
Sbjct: 401 SLVFTDMSDKQIPLDKFTCSILTRGLCRNGYITTALKFLNQV 442
Score = 81.6 bits (200), Expect = 1e-13
Identities = 51/150 (34%), Positives = 83/150 (55%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G CRNG A K + V +N + + + N LIN LCK+ L+ R + +
Sbjct: 425 GLCRNGYITTA---LKFLNQVLENNLIEDAFSHNILINFLCKSNNFAAARQLLAR-MYVR 480
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
GL+ ++ T+ TLIDG+ +EG +E A++++ +MV + PN ++YNS++N L K G ++ A
Sbjct: 481 GLVPDVVTFGTLIDGHCKEGNIESAVQVYDKMVKGEEKPNLLVYNSIINGLCKDGLVDVA 540
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDGYFRNG 451
L+ D+ + D T I+GYF G
Sbjct: 541 RSLV-DVLQRMGLVDTITYNTLINGYFNCG 569
Score = 75.1 bits (183), Expect = 9e-12
Identities = 48/156 (30%), Positives = 82/156 (52%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G C+ G + A ++ KM K +PN++ +N +IN LCK G ++ LV D+ ++
Sbjct: 495 GHCKEGNIESAVQVYDKMV---KGEEKPNLLVYNSIINGLCKDGLVDVARSLV--DVLQR 549
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
L + TY TLI+GY GK ++A +L M + I+ ++ YN+++ +L K G ++EA
Sbjct: 550 MGLVDTITYNTLINGYFNCGKFDKAFKLSTLMQNAGILASSATYNTVIKFLCKFGCVQEA 609
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEAL 469
L++ M PD T + +N A E +
Sbjct: 610 KELMTMMVLWGVLPDNITYRTLVININKNCSAEEVI 645
Score = 73.2 bits (178), Expect = 3e-11
Identities = 52/141 (36%), Positives = 76/141 (53%), Gaps = 3/141 (2%)
Frame = +2
Query: 56 EFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKKGLLSNMRTYATLIDGYAR 235
E VS +E N+ TFN +++ALCK K + + R I K G+ N+ T+ ++DG +
Sbjct: 228 EMVSYGYME-NVNTFNVVVHALCKDCKLQEALSVFYR-ILKSGIWPNVVTFNMMVDGACK 285
Query: 236 EGKLEEALRLFIE---MVDDDIVPNTVLYNSLLNWLFKQGHIEEAGFLLSDMRKAHASPD 406
G ++ AL+L + M I PN+V YNSL++ K G I A L ++M K P+
Sbjct: 286 MGDMDLALKLVRKMEIMSAGSIKPNSVTYNSLIDGFCKIGGITVAEELRNEMMKIDIEPN 345
Query: 407 CFTCAIAIDGYFRNGLAHEAL 469
T A I+GY R G EAL
Sbjct: 346 VRTYATMIEGYSRAGCLEEAL 366
Score = 55.5 bits (132), Expect = 7e-06
Identities = 36/135 (26%), Positives = 67/135 (49%)
Frame = +2
Query: 83 PNIVTFNCLINALCKAGKSELGEHLVKRDIAKKGLLSNMRTYATLIDGYAREGKLEEALR 262
PN V +N +++ L G + G LV D++ K + + T + L G R G + AL+
Sbjct: 379 PNSVVYNSIMHWLYMEGDVD-GASLVFTDMSDKQIPLDKFTCSILTRGLCRNGYITTALK 437
Query: 263 LFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEAGFLLSDMRKAHASPDCFTCAIAIDGYF 442
++++++++ + +N L+N+L K + A LL+ M PD T IDG+
Sbjct: 438 FLNQVLENNLIEDAFSHNILINFLCKSNNFAAARQLLARMYVRGLVPDVVTFGTLIDGHC 497
Query: 443 RNGLAHEALGYYKQI 487
+ G A+ Y ++
Sbjct: 498 KEGNIESAVQVYDKM 512
>gb|EOY28704.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
cacao]
Length = 722
Score = 140 bits (352), Expect = 2e-31
Identities = 70/162 (43%), Positives = 104/162 (64%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G CR G+ +LA L +KM +S N+V N+VT+N ++N CK GK E V D+ K
Sbjct: 324 GACRMGDIELALKLVRKMGVMSGNSVSLNLVTYNSIVNGFCKIGKFSFVEE-VCNDMVKA 382
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
G ++RTY TLIDG+AR+G LEEALRL EM + ++PNTV+YNS+L+W + +G +E A
Sbjct: 383 GFEPDVRTYGTLIDGHARKGCLEEALRLCDEMAERGLMPNTVVYNSILHWFYMEGDLEGA 442
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEALGYYKQI 487
+L+DM + PD T + I+G R+G +A +++Q+
Sbjct: 443 SSVLADMIDKNVCPDNVTYSTIIEGLCRHGYVVQAFNFHRQV 484
Score = 76.6 bits (187), Expect = 3e-12
Identities = 52/163 (31%), Positives = 86/163 (52%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G CR+G A+N +++ + N +E + N LIN LCK+ LV +
Sbjct: 467 GLCRHGYVVQAFNFHRQV--LEMNLIEDTF-SHNILINCLCKSNNLAGAMQLVG-SMFIH 522
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
GL+ ++ TY LID Y +EG++E A++++ EM + PN V+YNS+LN L K+ ++ A
Sbjct: 523 GLIPDLVTYGALIDRYCKEGQIESAVQIYDEMARLEEGPNMVIYNSILNGLCKEMSVDVA 582
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEALGYYKQIR 490
++ ++ S D T I+GY G EA + ++R
Sbjct: 583 RQMVDSLQSMGLS-DGITYNTLINGYCGCGNIDEAFALFLEMR 624
Score = 75.1 bits (183), Expect = 9e-12
Identities = 47/141 (33%), Positives = 76/141 (53%)
Frame = +2
Query: 8 CRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKKGL 187
C+ G+ + A ++ +M + + PN+V +N ++N LCK ++ +V D +
Sbjct: 539 CKEGQIESAVQIYDEMARLEEG---PNMVIYNSILNGLCKEMSVDVARQMV--DSLQSMG 593
Query: 188 LSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEAGF 367
LS+ TY TLI+GY G ++EA LF+EM + N V YN+L+N+L K G I++A
Sbjct: 594 LSDGITYNTLINGYCGCGNIDEAFALFLEMRKVGGLVNRVTYNTLINFLCKFGCIQQAKE 653
Query: 368 LLSDMRKAHASPDCFTCAIAI 430
L+ M PD T + I
Sbjct: 654 LMKRMLLHGLVPDVITYTMLI 674
Score = 59.7 bits (143), Expect = 4e-07
Identities = 42/162 (25%), Positives = 76/162 (46%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G R G + A L +M ++ + PN V +N +++ G E G V D+ K
Sbjct: 397 GHARKGCLEEALRLCDEM---AERGLMPNTVVYNSILHWFYMEGDLE-GASSVLADMIDK 452
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
+ + TY+T+I+G R G + +A ++++ +++ +T +N L+N L K ++ A
Sbjct: 453 NVCPDNVTYSTIIEGLCRHGYVVQAFNFHRQVLEMNLIEDTFSHNILINCLCKSNNLAGA 512
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEALGYYKQI 487
L+ M PD T ID Y + G A+ Y ++
Sbjct: 513 MQLVGSMFIHGLIPDLVTYGALIDRYCKEGQIESAVQIYDEM 554
>gb|ADN34051.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 653
Score = 137 bits (346), Expect = 1e-30
Identities = 72/151 (47%), Positives = 100/151 (66%)
Frame = +2
Query: 17 GEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKKGLLSN 196
GE DLA L + E +S +V PNIVT+NC+IN CK + E ++++ ++ K G+ SN
Sbjct: 263 GEMDLALKLTRNTEVISGGSVSPNIVTYNCIINGFCKIRRLESAKNVLA-EMIKLGIDSN 321
Query: 197 MRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEAGFLLS 376
RTYA LIDGYAR+G L+ A RL EMV+ ++P+TV+YNSL+ WL+ +G +EEA FLLS
Sbjct: 322 ERTYAPLIDGYARKGSLDVAFRLCDEMVETRLIPDTVVYNSLIYWLYIEGELEEASFLLS 381
Query: 377 DMRKAHASPDCFTCAIAIDGYFRNGLAHEAL 469
DM PD FT +I G +G ++AL
Sbjct: 382 DMINRRILPDEFTYSILTKGLCLSGHLNKAL 412
Score = 77.0 bits (188), Expect = 2e-12
Identities = 45/149 (30%), Positives = 80/149 (53%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G C+ G+ + A ++ K K + N+V +N +++ LCK G + LV + + +
Sbjct: 471 GHCKEGKIEAAVQIYDK---TVKADGKSNLVVYNSILDGLCKQGSIDAARLLVDK-LQQN 526
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
G L ++ TY TL+ G+ G++E+A LF+EM++ + N V YN ++N+L K G I++A
Sbjct: 527 GFLDSV-TYNTLLHGFCVNGEVEKAFALFLEMINVGSLVNIVSYNIMINFLCKMGLIQQA 585
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDGYFRN 448
L+ M PD T I + ++
Sbjct: 586 MELMRAMASQGIVPDLITYTTLITNFVKS 614
Score = 67.0 bits (162), Expect = 2e-09
Identities = 49/162 (30%), Positives = 85/162 (52%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G C +G + A + + V +N V+ + T N LIN + ++ + L+ I +
Sbjct: 401 GLCLSGHLNKALRVHYYI--VERNLVK-DAYTHNILINYMFQSRNIAGAKQLLSSMIVR- 456
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
G+ +M TY TL+ G+ +EGK+E A++++ + V D N V+YNS+L+ L KQG I +A
Sbjct: 457 GIKPDMVTYGTLVAGHCKEGKIEAAVQIYDKTVKADGKSNLVVYNSILDGLCKQGSI-DA 515
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEALGYYKQI 487
LL D + + D T + G+ NG +A + ++
Sbjct: 516 ARLLVDKLQQNGFLDSVTYNTLLHGFCVNGEVEKAFALFLEM 557
Score = 65.9 bits (159), Expect = 5e-09
Identities = 46/159 (28%), Positives = 77/159 (48%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G R G D+A+ L +M + + P+ V +N LI L G+ E L+ D+ +
Sbjct: 331 GYARKGSLDVAFRLCDEMV---ETRLIPDTVVYNSLIYWLYIEGELEEASFLLS-DMINR 386
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
+L + TY+ L G G L +ALR+ +V+ ++V + +N L+N++F+ +I A
Sbjct: 387 RILPDEFTYSILTKGLCLSGHLNKALRVHYYIVERNLVKDAYTHNILINYMFQSRNIAGA 446
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEALGYY 478
LLS M PD T + G+ + G A+ Y
Sbjct: 447 KQLLSSMIVRGIKPDMVTYGTLVAGHCKEGKIEAAVQIY 485
Score = 57.4 bits (137), Expect = 2e-06
Identities = 37/109 (33%), Positives = 58/109 (53%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G C NGE + A+ LF +M V NIV++N +IN LCK G + L+ R +A +
Sbjct: 540 GFCVNGEVEKAFALFLEMINVGSLV---NIVSYNIMINFLCKMGLIQQAMELM-RAMASQ 595
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLN 328
G++ ++ TY TLI + + + + L MV VP+ Y SL++
Sbjct: 596 GIVPDLITYTTLITNFVKSYGSDNVIELHDYMVLKGAVPDRQTYQSLVS 644
>ref|NP_172636.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200496|sp|Q9SAA6.1|PPR34_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g11710, mitochondrial; Flags: Precursor
gi|4835786|gb|AAD30252.1|AC007296_13 F25C20.14
[Arabidopsis thaliana] gi|22655109|gb|AAM98145.1|
putative salt-inducible protein [Arabidopsis thaliana]
gi|30725498|gb|AAP37771.1| At1g11710 [Arabidopsis
thaliana] gi|332190652|gb|AEE28773.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 137 bits (345), Expect = 1e-30
Identities = 72/162 (44%), Positives = 96/162 (59%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G C+ G+ A L KM +S N V PN VT+N +IN CKAG+ +L E ++ D+ K
Sbjct: 262 GACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAER-IRGDMVKS 320
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
G+ N RTY L+D Y R G +EALRL EM +V NTV+YNS++ WLF +G IE A
Sbjct: 321 GVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGA 380
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEALGYYKQI 487
+L DM + D FT AI + G RNG EA+ + +QI
Sbjct: 381 MSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQI 422
Score = 60.5 bits (145), Expect = 2e-07
Identities = 37/115 (32%), Positives = 63/115 (54%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G CRNG A ++ +S+ + +IV N L++ + K + ++ + +
Sbjct: 405 GLCRNGYVKEAVEFQRQ---ISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQ- 460
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQG 346
GL + ++ TLIDGY +EGKLE AL ++ M+ + N V+YNS++N L K+G
Sbjct: 461 GLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRG 515
>ref|XP_002518478.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223542323|gb|EEF43865.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 606
Score = 137 bits (344), Expect = 2e-30
Identities = 70/162 (43%), Positives = 101/162 (62%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G + G DLA L +KME +S +V+P+ VT+N +N CK G + E K+++ K
Sbjct: 207 GAIKMGAMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEF-KKEMLGK 265
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
+ N+RTYATL+DGY R G LE A RL E+V+ ++PN+V+YNS+++WL +G +E A
Sbjct: 266 EIEPNVRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGA 325
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEALGYYKQI 487
LLSDM PD FT +I I+G RNG +EA + + I
Sbjct: 326 SLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMI 367
Score = 77.8 bits (190), Expect = 1e-12
Identities = 49/154 (31%), Positives = 81/154 (52%)
Frame = +2
Query: 8 CRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKKGL 187
C++G+ + A +++KM K +PN++ +N +IN K G + L+ D ++
Sbjct: 422 CKDGKVENAIQVYEKM---IKTGEKPNLLIYNSVINGFAKEGSFDPAILLI--DTLRRMG 476
Query: 188 LSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEAGF 367
L ++ TY TLI GY GK+++A LF EM + I+ + V YN+L+N L K GH+ +A
Sbjct: 477 LFDVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINSLCKAGHVLQAKE 536
Query: 368 LLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEAL 469
L+ M PD T I I + + E +
Sbjct: 537 LMKMMVLRGLIPDYVTYTILITSFSKKCSPEEVI 570
Score = 76.3 bits (186), Expect = 4e-12
Identities = 45/163 (27%), Positives = 89/163 (54%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G CRNG + A FK ++ + + ++ + + N +IN LC++ + L+ ++ +
Sbjct: 350 GLCRNGYLNEA---FKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLA-NMYVR 405
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
GL+ ++ T+ TLID + ++GK+E A++++ +M+ PN ++YNS++N K+G + A
Sbjct: 406 GLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPA 465
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEALGYYKQIR 490
L+ +R+ D T I GY G +A + ++R
Sbjct: 466 ILLIDTLRRMGLF-DVVTYNTLIHGYCNCGKIDQAFALFSEMR 507
Score = 63.9 bits (154), Expect = 2e-08
Identities = 39/150 (26%), Positives = 76/150 (50%)
Frame = +2
Query: 38 NLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKKGLLSNMRTYATL 217
N F+ + + + + PN V +N +I+ L G E G L+ D+ K + + TY+ +
Sbjct: 289 NAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDME-GASLLLSDMIDKRIYPDQFTYSIV 347
Query: 218 IDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEAGFLLSDMRKAHA 397
I+G R G L EA + +++ +V + +N ++N+L + ++ A LL++M
Sbjct: 348 IEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGL 407
Query: 398 SPDCFTCAIAIDGYFRNGLAHEALGYYKQI 487
PD T ID + ++G A+ Y+++
Sbjct: 408 VPDVVTFGTLIDRHCKDGKVENAIQVYEKM 437
Score = 60.1 bits (144), Expect = 3e-07
Identities = 37/118 (31%), Positives = 64/118 (54%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G C G+ D A+ LF +M + + + VT+N LIN+LCKAG + L+K + +
Sbjct: 489 GYCNCGKIDQAFALFSEMR---NSGILASHVTYNTLINSLCKAGHVLQAKELMKMMVLR- 544
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIE 355
GL+ + TY LI ++++ EE + L MV +VP+ Y +++ L ++ +E
Sbjct: 545 GLIPDYVTYTILITSFSKKCSPEEVIELHDYMVLKGVVPDRQTYQTMVIPLLQEESVE 602
>ref|XP_004158042.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g11710, mitochondrial-like [Cucumis sativus]
Length = 653
Score = 134 bits (337), Expect = 1e-29
Identities = 70/151 (46%), Positives = 98/151 (64%)
Frame = +2
Query: 17 GEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKKGLLSN 196
GE DLA L + E +S +V PNIV +NC+IN CK + E ++++ ++ K G+ N
Sbjct: 263 GEMDLALKLTRNTEVISGGSVSPNIVAYNCIINGFCKIRRLESAKNVLG-EMIKLGIYFN 321
Query: 197 MRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEAGFLLS 376
RTYATLIDGYAR+G L+ A RL EMV+ ++P+T +YNSL+ WL+ +G +EEA FLLS
Sbjct: 322 ERTYATLIDGYARKGSLDVAFRLCDEMVEMRLIPDTFVYNSLIYWLYMEGELEEASFLLS 381
Query: 377 DMRKAHASPDCFTCAIAIDGYFRNGLAHEAL 469
DM PD FT +I G +G ++AL
Sbjct: 382 DMINRRILPDEFTYSILTKGLCVSGHLNKAL 412
Score = 72.4 bits (176), Expect = 6e-11
Identities = 44/146 (30%), Positives = 77/146 (52%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G C+ G+ + A ++ K K + N+V +N +++ LCK G + LV + + +
Sbjct: 471 GHCKEGKIEAAVQIYDK---TVKADGKSNLVVYNSILDGLCKQGSIYAAKLLVDK-LQQN 526
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
G L + TY TL+ G+ G++E+A LF+EM++ + N V YN ++++L K G I++A
Sbjct: 527 GFLDPV-TYNTLLHGFCVNGEIEKAFALFLEMINVGSLVNIVSYNIMIHFLCKMGLIQQA 585
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDGY 439
L+ M PD T I +
Sbjct: 586 MELMRAMSSQGIIPDLITYTTLITNF 611
Score = 68.2 bits (165), Expect = 1e-09
Identities = 47/159 (29%), Positives = 76/159 (47%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G R G D+A+ L +M + + P+ +N LI L G+ E L+ D+ +
Sbjct: 331 GYARKGSLDVAFRLCDEMV---EMRLIPDTFVYNSLIYWLYMEGELEEASFLLS-DMINR 386
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
+L + TY+ L G G L +ALR+ +V+ +V + YN L+N++F+ +I A
Sbjct: 387 RILPDEFTYSILTKGLCVSGHLNKALRVHYYIVERSLVRDAFTYNILINYMFQSRNIAGA 446
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEALGYY 478
LLS M PD T +DG+ + G A+ Y
Sbjct: 447 KQLLSSMIVGGIKPDMVTYGTPVDGHCKEGKIEAAVQIY 485
Score = 63.9 bits (154), Expect = 2e-08
Identities = 46/162 (28%), Positives = 83/162 (51%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G C +G + A + ++ + ++ + T+N LIN + ++ + L+ I
Sbjct: 401 GLCVSGHLNKALRVHY---YIVERSLVRDAFTYNILINYMFQSRNIAGAKQLLSSMIVG- 456
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
G+ +M TY T +DG+ +EGK+E A++++ + V D N V+YNS+L+ L KQG I A
Sbjct: 457 GIKPDMVTYGTPVDGHCKEGKIEAAVQIYDKTVKADGKSNLVVYNSILDGLCKQGSI-YA 515
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEALGYYKQI 487
LL D + + D T + G+ NG +A + ++
Sbjct: 516 AKLLVDKLQQNGFLDPVTYNTLLHGFCVNGEIEKAFALFLEM 557
>ref|XP_004154237.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g11710, mitochondrial-like [Cucumis sativus]
Length = 644
Score = 134 bits (336), Expect = 2e-29
Identities = 70/151 (46%), Positives = 99/151 (65%)
Frame = +2
Query: 17 GEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKKGLLSN 196
GE DLA L + +E +S +V PNIV +NC+IN CK + E ++++ ++ K G+ N
Sbjct: 263 GEMDLALKLTRNIEVISGGSVSPNIVAYNCIINGFCKIRRLESAKNVLG-EMIKLGIDFN 321
Query: 197 MRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEAGFLLS 376
RTYATLIDGYAR+G L+ A RL EMV+ ++P+T +YNSL+ WL+ +G +EEA FLLS
Sbjct: 322 ERTYATLIDGYARKGSLDVAFRLCDEMVEMRLIPDTFVYNSLIYWLYMEGELEEASFLLS 381
Query: 377 DMRKAHASPDCFTCAIAIDGYFRNGLAHEAL 469
DM PD FT +I G +G ++AL
Sbjct: 382 DMINRRILPDEFTYSILTKGLCVSGHLNKAL 412
Score = 68.9 bits (167), Expect = 6e-10
Identities = 43/146 (29%), Positives = 73/146 (50%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G C+ G+ + A ++ K V +N +++ LCK G + LV + + +
Sbjct: 471 GHCKEGKIEAAVQIYDKA------------VVYNSILDGLCKQGSIYAAKLLVDK-LQQN 517
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
G L + TY TL+ G+ G++E+A LF+EM++ + N V YN ++N+L K G I++A
Sbjct: 518 GFLDPV-TYNTLLHGFCVNGEIEKAFALFLEMINVGSLVNIVSYNIMINFLCKMGLIQQA 576
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDGY 439
L+ M PD T I +
Sbjct: 577 MELMRAMSSQGIIPDLITYTTLITNF 602
Score = 68.2 bits (165), Expect = 1e-09
Identities = 47/159 (29%), Positives = 76/159 (47%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G R G D+A+ L +M + + P+ +N LI L G+ E L+ D+ +
Sbjct: 331 GYARKGSLDVAFRLCDEMV---EMRLIPDTFVYNSLIYWLYMEGELEEASFLLS-DMINR 386
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
+L + TY+ L G G L +ALR+ +V+ +V + YN L+N++F+ +I A
Sbjct: 387 RILPDEFTYSILTKGLCVSGHLNKALRVHYYIVERSLVRDAFTYNILINYMFQSRNIAGA 446
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEALGYY 478
LLS M PD T +DG+ + G A+ Y
Sbjct: 447 KQLLSSMIVGGIKPDMVTYGTPVDGHCKEGKIEAAVQIY 485
Score = 55.1 bits (131), Expect = 1e-05
Identities = 43/162 (26%), Positives = 79/162 (48%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G C +G + A + ++ + ++ + T+N LIN + ++ + L+ I
Sbjct: 401 GLCVSGHLNKALRVHY---YIVERSLVRDAFTYNILINYMFQSRNIAGAKQLLSSMIVG- 456
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
G+ +M TY T +DG+ +EGK+E A++++ V+YNS+L+ L KQG I A
Sbjct: 457 GIKPDMVTYGTPVDGHCKEGKIEAAVQIY---------DKAVVYNSILDGLCKQGSI-YA 506
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEALGYYKQI 487
LL D + + D T + G+ NG +A + ++
Sbjct: 507 AKLLVDKLQQNGFLDPVTYNTLLHGFCVNGEIEKAFALFLEM 548
>ref|XP_002889890.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297335732|gb|EFH66149.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 657
Score = 134 bits (336), Expect = 2e-29
Identities = 70/162 (43%), Positives = 96/162 (59%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G C+ G+ A L KM +S N V PN VT+N +IN CKAG+ +L E ++ ++ K
Sbjct: 262 GACKTGDMRFALQLLGKMGVMSGNFVSPNAVTYNSVINGFCKAGRLDLAER-IRGEMVKL 320
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
G+ N RTY L+D Y R G +EALRL EM +V NTV+YNS++ WLF +G E A
Sbjct: 321 GVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVANTVIYNSIVYWLFMEGDTEGA 380
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEALGYYKQI 487
+L DM + D FT AI + G RNG EA+ +++QI
Sbjct: 381 MMVLRDMVRKRMQIDGFTRAIVVRGLCRNGYVAEAVEFHRQI 422
Score = 62.0 bits (149), Expect = 8e-08
Identities = 46/155 (29%), Positives = 77/155 (49%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G CRNG A ++ +S+ + +IV N L++ + K + ++ +
Sbjct: 405 GLCRNGYVAEAVEFHRQ---ISEKKLVEDIVCHNTLMHHFVRDKKLVCVDQILGSMLVH- 460
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
GL + + TLIDGY +EGKLE A+ ++ M+ + PN V+YNS++N L K+G A
Sbjct: 461 GLGLDTILFGTLIDGYLKEGKLERAIDIYDGMIKMNKTPNLVIYNSIVNGLSKRGMAGAA 520
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEA 466
+++ M S D T ++G + G EA
Sbjct: 521 EAVVNAME----SKDTVTYNTLLNGSLKIGNVEEA 551
Score = 57.4 bits (137), Expect = 2e-06
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 2/151 (1%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G + G+ + A +++ M ++K PN+V +N ++N L K G + E +V +K
Sbjct: 475 GYLKEGKLERAIDIYDGMIKMNKT---PNLVIYNSIVNGLSKRGMAGAAEAVVNAMESKD 531
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMV--DDDIVPNTVLYNSLLNWLFKQGHIE 355
+ TY TL++G + G +EEA + M D + + V YN L+N L K G E
Sbjct: 532 TV-----TYNTLLNGSLKIGNVEEADNILSRMQKQDGEKSVSLVTYNILINHLCKFGCYE 586
Query: 356 EAGFLLSDMRKAHASPDCFTCAIAIDGYFRN 448
+A +L M + PD T I + +N
Sbjct: 587 KAKEVLKIMVERGVVPDSITYGTLITSFSKN 617
>ref|XP_006417324.1| hypothetical protein EUTSA_v10007012mg [Eutrema salsugineum]
gi|557095095|gb|ESQ35677.1| hypothetical protein
EUTSA_v10007012mg [Eutrema salsugineum]
Length = 662
Score = 132 bits (332), Expect = 5e-29
Identities = 69/162 (42%), Positives = 95/162 (58%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G C+ G+ A + KM +S N V PN VT+N +IN CKAG+ +L E ++ D+ K
Sbjct: 263 GACKTGDMGFALLILGKMGVMSGNFVSPNAVTYNSVINGFCKAGRLDLAER-IRIDMVKS 321
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
G+ N RTY L+D Y R G +EALRL EM + +V NTV+YNS++ WLF +G E A
Sbjct: 322 GVGCNERTYGALVDAYGRAGSSDEALRLCDEMTSNGLVANTVIYNSVVYWLFMEGDTEAA 381
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEALGYYKQI 487
+L DM D FT AI + G RNG EA+ + ++I
Sbjct: 382 MLVLRDMTCKEMQIDRFTHAIVVRGLCRNGYVEEAVKFQREI 423
Score = 65.9 bits (159), Expect = 5e-09
Identities = 48/163 (29%), Positives = 84/163 (51%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G CRNG + A + E K VE V+ N L++ L + K + ++ + +
Sbjct: 406 GLCRNGYVEEAVKF--QREISEKKLVEDG-VSHNTLMHYLVRDKKLACADQ-IQGSMLVR 461
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
GL ++ ++ TLIDG+ +EGKLE A+ ++ M+ PN V+YNS++N L K+G A
Sbjct: 462 GLNLDVISFGTLIDGHLKEGKLERAIDIYDGMIKMKQKPNLVVYNSIVNGLSKRGLAGAA 521
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEALGYYKQIR 490
++ KA S D T ++ + ++G EA+ +++
Sbjct: 522 EAVV----KAMESKDAVTYNTLLNEFLKSGNVQEAVSILSKMQ 560
Score = 55.1 bits (131), Expect = 1e-05
Identities = 41/156 (26%), Positives = 74/156 (47%)
Frame = +2
Query: 11 RNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKKGLL 190
R G D A L +M + N + N V +N ++ L G +E LV RD+ K +
Sbjct: 339 RAGSSDEALRLCDEM---TSNGLVANTVIYNSVVYWLFMEGDTEAAM-LVLRDMTCKEMQ 394
Query: 191 SNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEAGFL 370
+ T+A ++ G R G +EEA++ E+ + +V + V +N+L+++L + + A +
Sbjct: 395 IDRFTHAIVVRGLCRNGYVEEAVKFQREISEKKLVEDGVSHNTLMHYLVRDKKLACADQI 454
Query: 371 LSDMRKAHASPDCFTCAIAIDGYFRNGLAHEALGYY 478
M + D + IDG+ + G A+ Y
Sbjct: 455 QGSMLVRGLNLDVISFGTLIDGHLKEGKLERAIDIY 490
>gb|EPS59350.1| hypothetical protein M569_15456, partial [Genlisea aurea]
Length = 594
Score = 129 bits (323), Expect = 5e-28
Identities = 67/156 (42%), Positives = 94/156 (60%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G R +F LA +F +M +S V PN+VT+NCLIN CK G E E ++ +A
Sbjct: 220 GALRANDFILASKIFCEMGTISMGLVSPNLVTYNCLINGYCKKGSPECAEKILHHLVADA 279
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
L N+RTYATL+DGY+R G LE+A ++ EM+ + PN V+YNS L+ L+ +G + A
Sbjct: 280 VLKPNIRTYATLLDGYSRVGDLEKAFGIYDEMMKRGMAPNPVVYNSFLHSLYMEGDVSGA 339
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEAL 469
+LSDM + SPD FT AI + G N +EA+
Sbjct: 340 SIILSDMMENGISPDKFTYAIVLKGLCMNRRVNEAV 375
Score = 64.3 bits (155), Expect = 2e-08
Identities = 42/155 (27%), Positives = 79/155 (50%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G C N + A L +E KNA + +N LI+ LC+ G + + + +
Sbjct: 364 GLCMNRRVNEAVKLLNWIE--EKNAAA-DAFFYNILIDYLCRNADIS-GANQLLASMFSR 419
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
G + + TY ++I + G++ A+R++ +MVD + PN V+YNS++N L ++G E
Sbjct: 420 GWIPDQVTYGSMIRSCCKAGEMGSAVRIYTDMVDSNKKPNVVIYNSIMNGLLRRGSRGEG 479
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEA 466
+L +M++ + D + ++ Y ++G EA
Sbjct: 480 ESVLEEMKRENIY-DAVSYNTLLNSYCKSGRIEEA 513
Score = 55.1 bits (131), Expect = 1e-05
Identities = 51/162 (31%), Positives = 74/162 (45%), Gaps = 1/162 (0%)
Frame = +2
Query: 8 CRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHL-VKRDIAKKG 184
CRN + A L M S+ + P+ VT+ +I + CKAG E+G + + D+
Sbjct: 401 CRNADISGANQLLASM--FSRGWI-PDQVTYGSMIRSCCKAG--EMGSAVRIYTDMVDSN 455
Query: 185 LLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEAG 364
N+ Y ++++G R G E + EM ++I + V YN+LLN K G IEEA
Sbjct: 456 KKPNVVIYNSIMNGLLRRGSRGEGESVLEEMKRENIY-DAVSYNTLLNSYCKSGRIEEAF 514
Query: 365 FLLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEALGYYKQIR 490
LL M S F I ID R G+ G +R
Sbjct: 515 ELLGQMGTTEKSVATFN--IMIDLLCRFGVFEGVKGVVGMMR 554
>ref|XP_006306468.1| hypothetical protein CARUB_v10012420mg [Capsella rubella]
gi|482575179|gb|EOA39366.1| hypothetical protein
CARUB_v10012420mg [Capsella rubella]
Length = 656
Score = 127 bits (318), Expect = 2e-27
Identities = 69/162 (42%), Positives = 91/162 (56%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G C+ G A L KM +S N V PN VT+N LIN CKAG+ +L E ++ D+
Sbjct: 261 GACKAGNMGFALQLLGKMGVMSGNFVSPNAVTYNSLINGFCKAGRLDLAER-IRGDMVNS 319
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
G+ N RTY L+D Y R G +EALRL EM +V NTV+ NS++ WLF +G E A
Sbjct: 320 GVGCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVANTVICNSIVYWLFMEGDTEGA 379
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEALGYYKQI 487
+L DM D FT AI + G +NG EA+ + +QI
Sbjct: 380 MMVLRDMICKKMQMDSFTHAIVVRGLCKNGYVVEAVEFQRQI 421
Score = 63.9 bits (154), Expect = 2e-08
Identities = 44/155 (28%), Positives = 77/155 (49%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G C+NG A ++ +S+ + ++V N L++ K K + ++ + +
Sbjct: 404 GLCKNGYVVEAVEFQRQ---ISEKKLVEDVVCHNTLMHHFLKDKKLACADQILGNMLVR- 459
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
G+ + ++ TLIDGY +EGKLE A+ ++ MV PN V+YNS++N L K+G A
Sbjct: 460 GMSLDAISFGTLIDGYLKEGKLERAMDIYDGMVKMKKTPNLVIYNSIVNGLSKRGLAGAA 519
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEA 466
+++ M + D T +D + G EA
Sbjct: 520 EAVVNSMER----KDAVTYNTLLDESLKTGNVEEA 550
Score = 62.4 bits (150), Expect = 6e-08
Identities = 52/160 (32%), Positives = 80/160 (50%), Gaps = 4/160 (2%)
Frame = +2
Query: 2 GCCRN-GEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAK 178
GC N E D + ++K+M+ S VE N+ TFN +I + CK K L V + K
Sbjct: 190 GCLLNWNEIDWFWKVYKEMD--SLGYVE-NVNTFNLVIYSFCKENKL-LEALSVFYRMLK 245
Query: 179 KGLLSNMRTYATLIDGYAREGKLEEALRLFIE---MVDDDIVPNTVLYNSLLNWLFKQGH 349
G+ N+ ++ +IDG + G + AL+L + M + + PN V YNSL+N K G
Sbjct: 246 CGVWPNVVSFNMMIDGACKAGNMGFALQLLGKMGVMSGNFVSPNAVTYNSLINGFCKAGR 305
Query: 350 IEEAGFLLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEAL 469
++ A + DM + + T +D Y R G + EAL
Sbjct: 306 LDLAERIRGDMVNSGVGCNERTYGALVDAYGRAGSSDEAL 345
Score = 58.9 bits (141), Expect = 7e-07
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 2/151 (1%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G + G+ + A +++ M + K PN+V +N ++N L K G + E +V K
Sbjct: 474 GYLKEGKLERAMDIYDGMVKMKKT---PNLVIYNSIVNGLSKRGLAGAAEAVVNSMERKD 530
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMV--DDDIVPNTVLYNSLLNWLFKQGHIE 355
+ TY TL+D + G +EEA + +M D +I+ + V YN L+N L K G E
Sbjct: 531 AV-----TYNTLLDESLKTGNVEEADSIISKMQTQDGEILVSRVTYNILINHLCKFGCYE 585
Query: 356 EAGFLLSDMRKAHASPDCFTCAIAIDGYFRN 448
+A +L M + PD T A + + ++
Sbjct: 586 KAKEVLKIMVQRGVVPDPITYATLVTSFSKD 616
>ref|XP_006287082.1| hypothetical protein CARUB_v10000242mg [Capsella rubella]
gi|482555788|gb|EOA19980.1| hypothetical protein
CARUB_v10000242mg [Capsella rubella]
Length = 818
Score = 108 bits (270), Expect = 7e-22
Identities = 62/163 (38%), Positives = 92/163 (56%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G R GEFD +++ K+ME N+ PN+V++ LIN LCK K L +VKRD+ +
Sbjct: 470 GYGRKGEFDKCFDILKEME---DNSTMPNVVSYGTLINCLCKGSKL-LEAEIVKRDMEDR 525
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
G+ N+R Y LI+G +GK+EEA RL EM+ +I N V YN+L++ L G + EA
Sbjct: 526 GVSPNVRIYNMLINGCCSKGKIEEAFRLSEEMLKKEIELNLVTYNTLIDGLSMTGKLAEA 585
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEALGYYKQIR 490
LL ++ + PD FT I GY G + Y++++
Sbjct: 586 EVLLLEISRKGLEPDVFTYNSLISGYEYAGNVQRCIALYEEMK 628
Score = 92.8 bits (229), Expect = 4e-17
Identities = 53/155 (34%), Positives = 86/155 (55%)
Frame = +2
Query: 17 GEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKKGLLSN 196
G+ LF +M+ + + P++ +N LI+ LCK+ K + E L +A++ LL +
Sbjct: 195 GDTGKGLKLFNRMKH---DRISPSVFIYNVLIDGLCKSRKMKEAEQLFDEMLARR-LLPS 250
Query: 197 MRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEAGFLLS 376
+ TY TLIDGY + G E++ ++ M D+ P+ + +N+LL LF G +E+A +L
Sbjct: 251 LITYNTLIDGYCKAGNPEKSFKVRERMKADNTEPSLITFNTLLKGLFDAGMVEDAENVLK 310
Query: 377 DMRKAHASPDCFTCAIAIDGYFRNGLAHEALGYYK 481
+M+ D FT +I DGY N A ALG Y+
Sbjct: 311 EMKDLGFVADAFTFSILFDGYSSNEKAEAALGVYE 345
Score = 83.2 bits (204), Expect = 3e-14
Identities = 49/155 (31%), Positives = 78/155 (50%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G CR G+ K+E + K ++P+ + +NCL+ C+ G+ E VK+ + K
Sbjct: 400 GYCRTGD---VVGARMKIEVMEKQGMKPDHLAYNCLVRRFCEVGEMANAEQEVKK-MKLK 455
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
GL ++ TY LI GY R+G+ ++ + EM D+ +PN V Y +L+N L K + EA
Sbjct: 456 GLPPSIETYNILIGGYGRKGEFDKCFDILKEMEDNSTMPNVVSYGTLINCLCKGSKLLEA 515
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEA 466
+ DM SP+ + I+G G EA
Sbjct: 516 EIVKRDMEDRGVSPNVRIYNMLINGCCSKGKIEEA 550
Score = 66.6 bits (161), Expect = 3e-09
Identities = 45/128 (35%), Positives = 68/128 (53%), Gaps = 1/128 (0%)
Frame = +2
Query: 71 NAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKKGLLSNMRTYATLIDGYAREGKLE 250
+ V+ N T + L+NALCK GK E E ++ R++ K GL+ N Y T+IDGY R G +
Sbjct: 350 SGVKMNAYTCSILLNALCKEGKIEKAEEILGREVGK-GLVPNEVIYNTMIDGYCRTGDVV 408
Query: 251 EALRLFIEMVD-DDIVPNTVLYNSLLNWLFKQGHIEEAGFLLSDMRKAHASPDCFTCAIA 427
A R+ IE+++ + P+ + YN L+ + G + A + M+ P T I
Sbjct: 409 GA-RMKIEVMEKQGMKPDHLAYNCLVRRFCEVGEMANAEQEVKKMKLKGLPPSIETYNIL 467
Query: 428 IDGYFRNG 451
I GY R G
Sbjct: 468 IGGYGRKG 475
>ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata] gi|297338544|gb|EFH68961.1| hypothetical protein
ARALYDRAFT_471420 [Arabidopsis lyrata subsp. lyrata]
Length = 667
Score = 107 bits (268), Expect = 1e-21
Identities = 60/160 (37%), Positives = 93/160 (58%)
Frame = +2
Query: 8 CRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKKGL 187
CR+G D A +LFK+ME ++ ++VT+N L+ LCKAGK G L+K D+ + +
Sbjct: 216 CRDGCIDAAISLFKEME---TKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLK-DMTSRKI 271
Query: 188 LSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEAGF 367
+ N+ T+ LID + +EGKL+EA L+ EM+ I PNT+ YNSL++ Q + EA
Sbjct: 272 IPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANN 331
Query: 368 LLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEALGYYKQI 487
+L M + + SPD T I GY + E + +++I
Sbjct: 332 MLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKI 371
Score = 88.2 bits (217), Expect = 1e-15
Identities = 51/162 (31%), Positives = 87/162 (53%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G C + A L +M +N +PN+VT+N ++N +CK+G + L L+++ + ++
Sbjct: 144 GLCLESKVSEAVVLVARMV---ENGCQPNVVTYNSIVNGICKSGDTSLALDLLRK-MDER 199
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
+ +++ TY+T+ID R+G ++ A+ LF EM I + V YNSL+ L K G +
Sbjct: 200 NVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDG 259
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEALGYYKQI 487
LL DM P+ T + ID + + G EA YK++
Sbjct: 260 VQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEM 301
Score = 88.2 bits (217), Expect = 1e-15
Identities = 51/155 (32%), Positives = 84/155 (54%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G C A N+ ++ + +N P+IVTF LI CK + + G L ++ I+K+
Sbjct: 319 GYCMQNRLSEANNM---LDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRK-ISKR 374
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
GL++N TY+ L+ G+ + GKLE A LF EMV ++P+ + Y LL+ L G +E+A
Sbjct: 375 GLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKA 434
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEA 466
+ D++K+ + D I I+G + G +A
Sbjct: 435 LEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDA 469
Score = 83.6 bits (205), Expect = 3e-14
Identities = 52/162 (32%), Positives = 81/162 (50%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G +F+L + KKME N + NI T N +IN C+ K+ ++ + + K
Sbjct: 74 GVASTKQFNLVLDFCKKMEL---NGIAHNIYTLNIMINCFCRCCKTCFAYSVLGK-VMKL 129
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
G + T+ TLI+G E K+ EA+ L MV++ PN V YNS++N + K G A
Sbjct: 130 GYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLA 189
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEALGYYKQI 487
LL M + + D FT + ID R+G A+ +K++
Sbjct: 190 LDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 231
Score = 80.9 bits (198), Expect = 2e-13
Identities = 46/155 (29%), Positives = 79/155 (50%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G C+ D LF+K +SK + N VT++ L+ C++GK E+ E L + ++
Sbjct: 354 GYCKVKRVDEGMKLFRK---ISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQ-EMVSL 409
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
G+L ++ TY L+DG GKLE+AL +F ++ + + V+Y ++ + K G +E+A
Sbjct: 410 GVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDA 469
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEA 466
L + P+ T + I G + G EA
Sbjct: 470 WNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA 504
Score = 75.1 bits (183), Expect = 9e-12
Identities = 43/150 (28%), Positives = 80/150 (53%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G C++G+ ++A LF++M + V P+++T+ L++ LC GK E + + D+ K
Sbjct: 389 GFCQSGKLEIAEELFQEMVSLG---VLPDVMTYGILLDGLCDNGKLEKALEIFE-DLQKS 444
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
+ ++ Y +I+G + GK+E+A LF + + PN + Y +++ L K+G + EA
Sbjct: 445 KMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA 504
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDGYFRNG 451
LL M + P+ T I + R+G
Sbjct: 505 NILLRKMEEDGNEPNDCTYNTLIRAHLRDG 534
Score = 71.2 bits (173), Expect = 1e-10
Identities = 42/144 (29%), Positives = 73/144 (50%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G C NG+ + A +F+ ++ K+ + +IV + +I +CK GK E +L + K
Sbjct: 424 GLCDNGKLEKALEIFEDLQ---KSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFC-SLPCK 479
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
G+ N+ TY +I G ++G L EA L +M +D PN YN+L+ + G + +
Sbjct: 480 GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTAS 539
Query: 362 GFLLSDMRKAHASPDCFTCAIAID 433
L+ +M+ S D + + ID
Sbjct: 540 AKLIEEMKSCGFSADASSIKMVID 563
Score = 70.1 bits (170), Expect = 3e-10
Identities = 52/198 (26%), Positives = 84/198 (42%), Gaps = 35/198 (17%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G C+ G+++ L K M + + PN++TFN LI+ K GK + L K I K
Sbjct: 249 GLCKAGKWNDGVQLLKDM---TSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITK- 304
Query: 182 GLLSNMRTY-----------------------------------ATLIDGYAREGKLEEA 256
G+ N TY +LI GY + +++E
Sbjct: 305 GISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEG 364
Query: 257 LRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEAGFLLSDMRKAHASPDCFTCAIAIDG 436
++LF ++ +V NTV Y+ L+ + G +E A L +M PD T I +DG
Sbjct: 365 MKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDG 424
Query: 437 YFRNGLAHEALGYYKQIR 490
NG +AL ++ ++
Sbjct: 425 LCDNGKLEKALEIFEDLQ 442
>ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity
to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 107 bits (266), Expect = 2e-21
Identities = 59/162 (36%), Positives = 93/162 (57%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G C++G D A+NLF +ME A +I+T+N LI C AG+ + G L+ RD+ K+
Sbjct: 272 GLCKDGSLDNAFNLFNEMEIKGFKA---DIITYNTLIGGFCNAGRWDDGAKLL-RDMIKR 327
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
+ N+ T++ LID + +EGKL EA +L EM+ I PNT+ YNSL++ K+ +EEA
Sbjct: 328 KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEA 387
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEALGYYKQI 487
++ M PD T I I+GY + + L ++++
Sbjct: 388 IQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM 429
Score = 81.3 bits (199), Expect = 1e-13
Identities = 51/145 (35%), Positives = 79/145 (54%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G C+ + A + M +SK +P+I+TFN LIN CKA + + G L R+++ +
Sbjct: 377 GFCKENRLEEAIQMVDLM--ISKGC-DPDIMTFNILINGYCKANRIDDGLELF-REMSLR 432
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
G+++N TY TL+ G+ + GKLE A +LF EMV + P+ V Y LL+ L G +E+A
Sbjct: 433 GVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKA 492
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDG 436
+ + K+ D I I G
Sbjct: 493 LEIFGKIEKSKMELDIGIYMIIIHG 517
Score = 79.7 bits (195), Expect = 4e-13
Identities = 45/155 (29%), Positives = 80/155 (51%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G C NG+ A L +M + +PN VT+ ++N +CK+G++ L L+++ + ++
Sbjct: 202 GLCLNGKVSDAVVLIDRMV---ETGFQPNEVTYGPVLNVMCKSGQTALAMELLRK-MEER 257
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
+ + Y+ +IDG ++G L+ A LF EM + + YN+L+ G ++
Sbjct: 258 NIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDG 317
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEA 466
LL DM K SP+ T ++ ID + + G EA
Sbjct: 318 AKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREA 352
Score = 67.4 bits (163), Expect = 2e-09
Identities = 45/148 (30%), Positives = 68/148 (45%)
Frame = +2
Query: 44 FKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKKGLLSNMRTYATLID 223
F M + K EP+ V FN L+N LC + LV R + + G + T TL++
Sbjct: 143 FSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDR-MVEMGHKPTLITLNTLVN 201
Query: 224 GYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEAGFLLSDMRKAHASP 403
G GK+ +A+ L MV+ PN V Y +LN + K G A LL M + +
Sbjct: 202 GLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL 261
Query: 404 DCFTCAIAIDGYFRNGLAHEALGYYKQI 487
D +I IDG ++G A + ++
Sbjct: 262 DAVKYSIIIDGLCKDGSLDNAFNLFNEM 289
>ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein
SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 106 bits (264), Expect = 4e-21
Identities = 56/162 (34%), Positives = 98/162 (60%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G C+ GE + A+ + +M F+ ++ + P+++TFN +++ LCK + L H V + ++
Sbjct: 180 GLCKEGEIEAAFRVVDEM-FMIESGLSPDVITFNSVLDGLCKEQRI-LDAHNVFKRALER 237
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
G N+ TY+TLIDG ++ K++EAL+L +MV+ NTV Y+++++ L K G +E+A
Sbjct: 238 GCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDA 297
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEALGYYKQI 487
+L MR A PD T IDG+F+ EA+G +++
Sbjct: 298 VVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREM 339
Score = 80.1 bits (196), Expect = 3e-13
Identities = 51/162 (31%), Positives = 84/162 (51%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G + + D A L KM + A N VT++ +++ L K G+ E +V R +
Sbjct: 252 GLSKMAKMDEALQLLAKMVELGCRA---NTVTYSTVVDGLLKVGRME-DAVVVLRQMRDA 307
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
G L + TY TLIDG+ + +L EA+ L EM++ P+ V Y +L + L + G +EA
Sbjct: 308 GCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEA 367
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEALGYYKQI 487
+L M +P+ T + +DG + G EALGY++++
Sbjct: 368 VEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKM 409
Score = 79.3 bits (194), Expect = 5e-13
Identities = 47/140 (33%), Positives = 69/140 (49%)
Frame = +2
Query: 32 AYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKKGLLSNMRTYA 211
AY+LF++ P +VT+N +I+ LCK G+ E L G + TY+
Sbjct: 49 AYDLFEEAR---AKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYS 105
Query: 212 TLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEAGFLLSDMRKA 391
TLIDG R+ ++++ +L EM PN V YN+L+N L QG +EA LL M
Sbjct: 106 TLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAAN 165
Query: 392 HASPDCFTCAIAIDGYFRNG 451
P+ T + I G + G
Sbjct: 166 GCPPELITFGLIIKGLCKEG 185
Score = 79.0 bits (193), Expect = 6e-13
Identities = 44/163 (26%), Positives = 80/163 (49%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G CR+G FD A + +++++ PN +T++ +++ LCKAG+ ++ +
Sbjct: 357 GLCRSGRFDEAVEI---LDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDE 413
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
+ ++ Y+ LIDG + GK++EA M+ +P+ V ++ L+N L G I+
Sbjct: 414 VVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTG 473
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEALGYYKQIR 490
L M + PD T A +D R EA ++Q+R
Sbjct: 474 LELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMR 516
Score = 75.1 bits (183), Expect = 9e-12
Identities = 46/145 (31%), Positives = 75/145 (51%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G C+ G A F+KM V P+++ ++ LI+ LCKAGK + ++R I +
Sbjct: 392 GLCKAGRVTEALGYFEKM--ARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMI-RA 448
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
G + ++ T++ LI+G G+++ L LF M + VP+ V Y +L++ L + ++EA
Sbjct: 449 GRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEA 508
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDG 436
L MR SPD T I G
Sbjct: 509 FDLFQQMRSDGLSPDRSTRRTMIHG 533
Score = 73.6 bits (179), Expect = 3e-11
Identities = 41/120 (34%), Positives = 69/120 (57%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G C+ G+ D AY ++M + P++VTF+ LIN LC AG+ + G L R +A++
Sbjct: 428 GLCKAGKIDEAYEFLERMIRAGRI---PDVVTFSILINGLCDAGRIDTGLELF-RGMAER 483
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
G + +M TYATL+D R +++EA LF +M D + P+ ++++ L + E+A
Sbjct: 484 GCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDA 543
Score = 70.1 bits (170), Expect = 3e-10
Identities = 40/150 (26%), Positives = 80/150 (53%), Gaps = 1/150 (0%)
Frame = +2
Query: 44 FKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLV-KRDIAKKGLLSNMRTYATLI 220
F +E ++ N P ++TF +I LCK G+ E +V + + + GL ++ T+ +++
Sbjct: 156 FSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVL 215
Query: 221 DGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEAGFLLSDMRKAHAS 400
DG +E ++ +A +F ++ PN V Y++L++ L K ++EA LL+ M +
Sbjct: 216 DGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCR 275
Query: 401 PDCFTCAIAIDGYFRNGLAHEALGYYKQIR 490
+ T + +DG + G +A+ +Q+R
Sbjct: 276 ANTVTYSTVVDGLLKVGRMEDAVVVLRQMR 305
>gb|EPS66849.1| hypothetical protein M569_07924, partial [Genlisea aurea]
Length = 729
Score = 105 bits (263), Expect = 5e-21
Identities = 61/161 (37%), Positives = 89/161 (55%), Gaps = 1/161 (0%)
Frame = +2
Query: 8 CRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGK-SELGEHLVKRDIAKKG 184
C++ D AY L K+M + +EPN++T+N +IN LCK G+ E + LV D+ KG
Sbjct: 244 CKSRNIDQAYGLLKQMW---ERNLEPNVITYNVIINGLCKEGRIKETDDVLV--DMKAKG 298
Query: 185 LLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEAG 364
L N TY TL+DGY +EG +AL L EMV + + PN V Y L+N L K G+++ A
Sbjct: 299 LAPNEITYNTLVDGYCKEGNFHQALALHAEMVKNGLSPNVVTYTCLINSLCKAGNLQRAM 358
Query: 365 FLLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEALGYYKQI 487
+ M P+ T IDG+ + G EA G +++
Sbjct: 359 DYFNQMAVRGLKPNEKTYTTLIDGFSQQGFMDEAYGLVEEM 399
Score = 100 bits (248), Expect = 3e-19
Identities = 55/149 (36%), Positives = 84/149 (56%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G C+ G F A L +M KN + PN+VT+ CLIN+LCKAG + + +A +
Sbjct: 312 GYCKEGNFHQALALHAEMV---KNGLSPNVVTYTCLINSLCKAGNLQRAMDYFNQ-MAVR 367
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
GL N +TY TLIDG++++G ++EA L EM+ P+ V YN+L+N + G ++E
Sbjct: 368 GLKPNEKTYTTLIDGFSQQGFMDEAYGLVEEMISKGFSPSIVTYNALINGHCQLGRVDEG 427
Query: 362 GFLLSDMRKAHASPDCFTCAIAIDGYFRN 448
++ M PD + + I+GY RN
Sbjct: 428 LNVIQTMTSRGVFPDVVSYSSIINGYCRN 456
Score = 93.2 bits (230), Expect = 3e-17
Identities = 52/160 (32%), Positives = 90/160 (56%)
Frame = +2
Query: 8 CRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKKGL 187
CRN D A +F +M +N + PN+ T+N LI LC + G L ++ + K+G+
Sbjct: 176 CRN--VDSARCVFHEM---MENGISPNVYTYNVLIRGLCANKEMNQGLSLFEQ-MEKRGV 229
Query: 188 LSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEAGF 367
L N+ T+ T+ID Y + +++A L +M + ++ PN + YN ++N L K+G I+E
Sbjct: 230 LPNVVTFNTVIDAYCKSRNIDQAYGLLKQMWERNLEPNVITYNVIINGLCKEGRIKETDD 289
Query: 368 LLSDMRKAHASPDCFTCAIAIDGYFRNGLAHEALGYYKQI 487
+L DM+ +P+ T +DGY + G H+AL + ++
Sbjct: 290 VLVDMKAKGLAPNEITYNTLVDGYCKEGNFHQALALHAEM 329
Score = 72.4 bits (176), Expect = 6e-11
Identities = 46/147 (31%), Positives = 84/147 (57%), Gaps = 1/147 (0%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G + G D AY L ++M +SK P+IVT+N LIN C+ G+ + G ++++ + +
Sbjct: 382 GFSQQGFMDEAYGLVEEM--ISKG-FSPSIVTYNALINGHCQLGRVDEGLNVIQT-MTSR 437
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
G+ ++ +Y+++I+GY R L++A + +M I P+T+ Y+SL+ L + ++EA
Sbjct: 438 GVFPDVVSYSSIINGYCRNLDLDKAFSVKEDMSQKGIFPDTITYSSLIQGLCELRRLDEA 497
Query: 362 GFLLSDM-RKAHASPDCFTCAIAIDGY 439
L ++M K + PD T I+ Y
Sbjct: 498 CKLFTEMSSKLNLLPDKCTYTCLINAY 524
Score = 69.3 bits (168), Expect = 5e-10
Identities = 46/164 (28%), Positives = 79/164 (48%), Gaps = 9/164 (5%)
Frame = +2
Query: 2 GCCRNGEFDLAYNLFKKMEFVSKNAVEPNIVTFNCLINALCKAGKSELGEHLVKRDIAKK 181
G CRN + D A+++ + M S+ + P+ +T++ LI LC+ + + L +K
Sbjct: 452 GYCRNLDLDKAFSVKEDM---SQKGIFPDTITYSSLIQGLCELRRLDEACKLFTEMSSKL 508
Query: 182 GLLSNMRTYATLIDGYAREGKLEEALRLFIEMVDDDIVPNTVLYNSLLNWLFKQGHIEEA 361
LL + TY LI+ Y E + +A+ L EM+ + P+ + YN L+N + KQ +EA
Sbjct: 509 NLLPDKCTYTCLINAYCAENDIPKAIHLHDEMIRRGLFPDVISYNVLVNGINKQSRSDEA 568
Query: 362 GFLL---------SDMRKAHASPDCFTCAIAIDGYFRNGLAHEA 466
LL + + C + A + + NGL +EA
Sbjct: 569 RRLLFKSTTHGSQHEYTHDYLIQRCISVASLMKAFCMNGLMNEA 612