BLASTX nr result

ID: Zingiber23_contig00046841 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00046841
         (305 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMS50126.1| TOM1-like protein 2 [Triticum urartu]                   59   9e-07
gb|EMT01224.1| TOM1-like protein 2 [Aegilops tauschii]                 58   1e-06
ref|XP_003572401.1| PREDICTED: TOM1-like protein 2-like isoform ...    55   7e-06

>gb|EMS50126.1| TOM1-like protein 2 [Triticum urartu]
          Length = 701

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 29/62 (46%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
 Frame = +2

Query: 5   NSETSQVVQT-SDGQRVQLSLGWNGQLA-GYNPQEQALGYGADDQDGAFPPPPWEKQPSQ 178
           N  TS  + T   G  +  +  WNGQLA G N  +QA  YG DDQ    PPPPWE QP++
Sbjct: 449 NGLTSNTIPTYGQGSDLNSASSWNGQLAQGMNQPQQAPNYGQDDQSSDLPPPPWETQPAE 508

Query: 179 CD 184
            D
Sbjct: 509 SD 510


>gb|EMT01224.1| TOM1-like protein 2 [Aegilops tauschii]
          Length = 765

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 29/62 (46%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
 Frame = +2

Query: 5   NSETSQVVQT-SDGQRVQLSLGWNGQLA-GYNPQEQALGYGADDQDGAFPPPPWEKQPSQ 178
           N  TS  + T   G  +  +  WNGQLA G N  +QA  YG DDQ    PPPPWE QP++
Sbjct: 512 NGLTSNTIPTYGQGPDLNSASSWNGQLAQGMNQPQQAPNYGQDDQSSDLPPPPWETQPAE 571

Query: 179 CD 184
            D
Sbjct: 572 SD 573


>ref|XP_003572401.1| PREDICTED: TOM1-like protein 2-like isoform 1 [Brachypodium
           distachyon]
          Length = 678

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 28/64 (43%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
 Frame = +2

Query: 5   NSETSQVVQTSDGQ-RVQLSLGWNGQLA-GYNPQEQALGYGADDQDGAFPPPPWEKQPSQ 178
           N + S  +   D Q ++  +  WNG  A G N Q QAL YG +DQ+G  PPPPWE Q S 
Sbjct: 422 NGDISNAIVPYDQQSQLNSTSSWNGHPAYGMNSQRQALNYGVEDQNGDLPPPPWELQQSM 481

Query: 179 CDLP 190
            + P
Sbjct: 482 ANQP 485


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