BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00046814
         (358 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFB18352.1| RNA polymerase beta subunit, partial [Renealmia a...   118   9e-25
gb|AFB18357.1| RNA polymerase beta subunit, partial [Tradescanti...   115   6e-24
ref|YP_008854586.1| RNA polymerase beta subunit [Curcuma roscoea...   114   1e-23
ref|YP_007475696.1| RNA polymerase beta subunit [Zingiber specta...   114   1e-23
gb|AFB18324.1| RNA polymerase beta subunit, partial [Belosynapsi...   114   2e-23
gb|AFB18349.1| RNA polymerase beta subunit, partial [Pitcairnia ...   113   3e-23
gb|AFB18346.1| RNA polymerase beta subunit, partial [Neoregelia ...   113   3e-23
gb|AFB18334.1| RNA polymerase beta subunit, partial [Fosterella ...   113   3e-23
gb|AGE93362.1| RNA polymerase beta subunit [Alpinia zerumbet]         112   4e-23
gb|AFB18353.1| RNA polymerase beta subunit, partial [Sparganium ...   111   9e-23
gb|AFB18344.1| RNA polymerase beta subunit, partial [Navia saxic...   111   9e-23
gb|AFB18325.1| RNA polymerase beta subunit, partial [Brocchinia ...   110   2e-22
gb|AFB18356.1| RNA polymerase beta subunit [Thamnochortus insignis]   110   3e-22
gb|AHA13174.1| RNA polymerase beta subunit [Thaumatococcus danie...   109   4e-22
ref|YP_008854417.1| RNA polymerase beta subunit [Musa textilis] ...   109   4e-22
emb|CCW72367.1| rpoB (chloroplast) [Musa acuminata subsp. malacc...   109   4e-22
ref|YP_007475611.1| RNA polymerase beta subunit [Heliconia colli...   109   4e-22
gb|AAW82495.1| RNA polymerase beta chain [Phalaenopsis aphrodite...   108   7e-22
ref|YP_006073260.1| RNA polymerase beta subunit (chloroplast) [P...   108   7e-22
gb|AFB18350.1| RNA polymerase beta subunit, partial [Potarophytu...   108   1e-21

>gb|AFB18352.1| RNA polymerase beta subunit, partial [Renealmia alpinia]
          Length = 1078

 Score =  118 bits (295), Expect = 9e-25
 Identities = 55/59 (93%), Positives = 57/59 (96%)
 Frame = +3

Query: 180 KIKMLWNDGNEGMSTRPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIKFK*FVE 356
           KIKMLW+DGNEGMST PGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEI+FK FVE
Sbjct: 3   KIKMLWDDGNEGMSTIPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIEFKLFVE 61


>gb|AFB18357.1| RNA polymerase beta subunit, partial [Tradescantia ohiensis]
          Length = 1083

 Score =  115 bits (288), Expect = 6e-24
 Identities = 57/66 (86%), Positives = 60/66 (90%)
 Frame = +3

Query: 159 FSIKGKLKIKMLWNDGNEGMSTRPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIK 338
           FSIK KLKIKML NDGNEGMST PGFSQIQFEGFCRFI++GL EEF KFPKIEDTDQEI+
Sbjct: 1   FSIKRKLKIKMLRNDGNEGMSTIPGFSQIQFEGFCRFIDKGLGEEFQKFPKIEDTDQEIE 60

Query: 339 FK*FVE 356
           FK FVE
Sbjct: 61  FKLFVE 66


>ref|YP_008854586.1| RNA polymerase beta subunit [Curcuma roscoeana]
           gi|557637493|gb|AHA13088.1| RNA polymerase beta subunit
           [Curcuma roscoeana]
          Length = 1082

 Score =  114 bits (286), Expect = 1e-23
 Identities = 53/56 (94%), Positives = 54/56 (96%)
 Frame = +3

Query: 189 MLWNDGNEGMSTRPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIKFK*FVE 356
           MLWNDGNEGMST PGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEI+FK FVE
Sbjct: 1   MLWNDGNEGMSTIPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIEFKLFVE 56


>ref|YP_007475696.1| RNA polymerase beta subunit [Zingiber spectabile]
           gi|449326176|gb|AGE92761.1| RNA polymerase beta subunit
           [Zingiber spectabile]
          Length = 1075

 Score =  114 bits (286), Expect = 1e-23
 Identities = 53/56 (94%), Positives = 54/56 (96%)
 Frame = +3

Query: 189 MLWNDGNEGMSTRPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIKFK*FVE 356
           MLWNDGNEGMST PGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEI+FK FVE
Sbjct: 1   MLWNDGNEGMSTIPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIEFKLFVE 56


>gb|AFB18324.1| RNA polymerase beta subunit, partial [Belosynapsis ciliata]
          Length = 1085

 Score =  114 bits (284), Expect = 2e-23
 Identities = 56/66 (84%), Positives = 59/66 (89%)
 Frame = +3

Query: 159 FSIKGKLKIKMLWNDGNEGMSTRPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIK 338
           F IK KLKIKML NDGNEGMST PGFSQIQFEGFCRFI++GL EEF KFPKIEDTDQEI+
Sbjct: 3   FLIKRKLKIKMLRNDGNEGMSTIPGFSQIQFEGFCRFIDKGLAEEFQKFPKIEDTDQEIE 62

Query: 339 FK*FVE 356
           FK FVE
Sbjct: 63  FKLFVE 68


>gb|AFB18349.1| RNA polymerase beta subunit, partial [Pitcairnia feliciana]
          Length = 1085

 Score =  113 bits (282), Expect = 3e-23
 Identities = 57/66 (86%), Positives = 59/66 (89%)
 Frame = +3

Query: 159 FSIKGKLKIKMLWNDGNEGMSTRPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIK 338
           FSI  KLKIKML N GNEGMST PGFSQIQFEGFCRFIN+GLTEEFHKFPKIEDTDQEI+
Sbjct: 4   FSINRKLKIKMLRN-GNEGMSTIPGFSQIQFEGFCRFINQGLTEEFHKFPKIEDTDQEIE 62

Query: 339 FK*FVE 356
           FK F E
Sbjct: 63  FKLFAE 68


>gb|AFB18346.1| RNA polymerase beta subunit, partial [Neoregelia carolinae]
          Length = 1085

 Score =  113 bits (282), Expect = 3e-23
 Identities = 57/66 (86%), Positives = 59/66 (89%)
 Frame = +3

Query: 159 FSIKGKLKIKMLWNDGNEGMSTRPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIK 338
           FSI  KLKIKML N GNEGMST PGFSQIQFEGFCRFIN+GLTEEFHKFPKIEDTDQEI+
Sbjct: 4   FSINRKLKIKMLRN-GNEGMSTIPGFSQIQFEGFCRFINQGLTEEFHKFPKIEDTDQEIE 62

Query: 339 FK*FVE 356
           FK F E
Sbjct: 63  FKLFAE 68


>gb|AFB18334.1| RNA polymerase beta subunit, partial [Fosterella caulescens]
          Length = 1082

 Score =  113 bits (282), Expect = 3e-23
 Identities = 57/66 (86%), Positives = 59/66 (89%)
 Frame = +3

Query: 159 FSIKGKLKIKMLWNDGNEGMSTRPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIK 338
           FSI  KLKIKML N GNEGMST PGFSQIQFEGFCRFIN+GLTEEFHKFPKIEDTDQEI+
Sbjct: 1   FSINRKLKIKMLRN-GNEGMSTIPGFSQIQFEGFCRFINQGLTEEFHKFPKIEDTDQEIE 59

Query: 339 FK*FVE 356
           FK F E
Sbjct: 60  FKLFAE 65


>gb|AGE93362.1| RNA polymerase beta subunit [Alpinia zerumbet]
          Length = 1073

 Score =  112 bits (281), Expect = 4e-23
 Identities = 52/56 (92%), Positives = 54/56 (96%)
 Frame = +3

Query: 189 MLWNDGNEGMSTRPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIKFK*FVE 356
           MLW+DGNEGMST PGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEI+FK FVE
Sbjct: 1   MLWDDGNEGMSTIPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIEFKLFVE 56


>gb|AFB18353.1| RNA polymerase beta subunit, partial [Sparganium eurycarpum]
          Length = 1083

 Score =  111 bits (278), Expect = 9e-23
 Identities = 57/66 (86%), Positives = 59/66 (89%)
 Frame = +3

Query: 159 FSIKGKLKIKMLWNDGNEGMSTRPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIK 338
           FSI  KLKIKML N GNEGMST PGFSQIQFEGFCRFIN+GLTEEF KFPKIEDTDQEI+
Sbjct: 2   FSINRKLKIKMLRN-GNEGMSTIPGFSQIQFEGFCRFINQGLTEEFQKFPKIEDTDQEIE 60

Query: 339 FK*FVE 356
           FK FVE
Sbjct: 61  FKLFVE 66


>gb|AFB18344.1| RNA polymerase beta subunit, partial [Navia saxicola]
          Length = 1087

 Score =  111 bits (278), Expect = 9e-23
 Identities = 56/66 (84%), Positives = 59/66 (89%)
 Frame = +3

Query: 159 FSIKGKLKIKMLWNDGNEGMSTRPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIK 338
           FSI  KLKIKML N GNEGMST PGFSQIQFEGFCRFIN+GLTEEFHKFPKIEDTDQEI+
Sbjct: 4   FSINRKLKIKMLRN-GNEGMSTIPGFSQIQFEGFCRFINQGLTEEFHKFPKIEDTDQEIE 62

Query: 339 FK*FVE 356
           F+ F E
Sbjct: 63  FQLFAE 68


>gb|AFB18325.1| RNA polymerase beta subunit, partial [Brocchinia micrantha]
          Length = 1085

 Score =  110 bits (275), Expect = 2e-22
 Identities = 55/66 (83%), Positives = 59/66 (89%)
 Frame = +3

Query: 159 FSIKGKLKIKMLWNDGNEGMSTRPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIK 338
           FSI  KLKIKML N GNEGMST PGFSQIQFEGFCRFIN+GLTEEFHKFPK+EDTDQEI+
Sbjct: 4   FSINRKLKIKMLRN-GNEGMSTIPGFSQIQFEGFCRFINQGLTEEFHKFPKMEDTDQEIE 62

Query: 339 FK*FVE 356
           F+ F E
Sbjct: 63  FQLFAE 68


>gb|AFB18356.1| RNA polymerase beta subunit [Thamnochortus insignis]
          Length = 1077

 Score =  110 bits (274), Expect = 3e-22
 Identities = 54/66 (81%), Positives = 59/66 (89%)
 Frame = +3

Query: 159 FSIKGKLKIKMLWNDGNEGMSTRPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIK 338
           FSI  KLKIKML N  NEGMST PGF+QIQFEGFCRFIN+GLTEEFHKFPKIEDTDQE++
Sbjct: 4   FSINSKLKIKMLRNQ-NEGMSTIPGFNQIQFEGFCRFINQGLTEEFHKFPKIEDTDQEVE 62

Query: 339 FK*FVE 356
           F+ FVE
Sbjct: 63  FQLFVE 68


>gb|AHA13174.1| RNA polymerase beta subunit [Thaumatococcus daniellii]
          Length = 1070

 Score =  109 bits (272), Expect = 4e-22
 Identities = 52/56 (92%), Positives = 53/56 (94%)
 Frame = +3

Query: 189 MLWNDGNEGMSTRPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIKFK*FVE 356
           ML NDGNEGMST PGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEI+FK FVE
Sbjct: 1   MLRNDGNEGMSTIPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIEFKLFVE 56


>ref|YP_008854417.1| RNA polymerase beta subunit [Musa textilis]
           gi|557636904|gb|AHA12506.1| RNA polymerase beta subunit
           [Musa textilis]
          Length = 1074

 Score =  109 bits (272), Expect = 4e-22
 Identities = 52/56 (92%), Positives = 53/56 (94%)
 Frame = +3

Query: 189 MLWNDGNEGMSTRPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIKFK*FVE 356
           ML NDGNEGMST PGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEI+FK FVE
Sbjct: 1   MLRNDGNEGMSTIPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIEFKLFVE 56


>emb|CCW72367.1| rpoB (chloroplast) [Musa acuminata subsp. malaccensis]
          Length = 1074

 Score =  109 bits (272), Expect = 4e-22
 Identities = 52/56 (92%), Positives = 53/56 (94%)
 Frame = +3

Query: 189 MLWNDGNEGMSTRPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIKFK*FVE 356
           ML NDGNEGMST PGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEI+FK FVE
Sbjct: 1   MLRNDGNEGMSTIPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIEFKLFVE 56


>ref|YP_007475611.1| RNA polymerase beta subunit [Heliconia collinsiana]
           gi|449326090|gb|AGE92676.1| RNA polymerase beta subunit
           [Heliconia collinsiana]
          Length = 1083

 Score =  109 bits (272), Expect = 4e-22
 Identities = 52/56 (92%), Positives = 53/56 (94%)
 Frame = +3

Query: 189 MLWNDGNEGMSTRPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIKFK*FVE 356
           ML NDGNEGMST PGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEI+FK FVE
Sbjct: 1   MLRNDGNEGMSTIPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIEFKLFVE 56


>gb|AAW82495.1| RNA polymerase beta chain [Phalaenopsis aphrodite subsp. formosana]
          Length = 1091

 Score =  108 bits (270), Expect = 7e-22
 Identities = 55/66 (83%), Positives = 59/66 (89%)
 Frame = +3

Query: 159 FSIKGKLKIKMLWNDGNEGMSTRPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIK 338
           FSIK KL+IKML N GNEGMST PGFSQIQFEGFCRFIN+GLTEEFHKF KIED DQEI+
Sbjct: 12  FSIKRKLQIKMLQN-GNEGMSTIPGFSQIQFEGFCRFINQGLTEEFHKFQKIEDRDQEIE 70

Query: 339 FK*FVE 356
           F+ FVE
Sbjct: 71  FQLFVE 76


>ref|YP_006073260.1| RNA polymerase beta subunit (chloroplast) [Phalaenopsis equestris]
           gi|329668864|gb|AEB96311.1| RNA polymerase beta subunit
           (chloroplast) [Phalaenopsis equestris]
          Length = 1091

 Score =  108 bits (270), Expect = 7e-22
 Identities = 55/66 (83%), Positives = 59/66 (89%)
 Frame = +3

Query: 159 FSIKGKLKIKMLWNDGNEGMSTRPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIK 338
           FSIK KL+IKML N GNEGMST PGFSQIQFEGFCRFIN+GLTEEFHKF KIED DQEI+
Sbjct: 12  FSIKRKLQIKMLQN-GNEGMSTIPGFSQIQFEGFCRFINQGLTEEFHKFQKIEDRDQEIE 70

Query: 339 FK*FVE 356
           F+ FVE
Sbjct: 71  FQLFVE 76


>gb|AFB18350.1| RNA polymerase beta subunit, partial [Potarophytum riparium]
          Length = 1083

 Score =  108 bits (269), Expect = 1e-21
 Identities = 54/66 (81%), Positives = 57/66 (86%)
 Frame = +3

Query: 159 FSIKGKLKIKMLWNDGNEGMSTRPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIK 338
           FSI  KLKIKML N GNEGM T PGFSQIQFEGFCRFIN+GL EEFHKFPKIEDTDQEI+
Sbjct: 2   FSINSKLKIKMLRN-GNEGMPTIPGFSQIQFEGFCRFINQGLPEEFHKFPKIEDTDQEIE 60

Query: 339 FK*FVE 356
           F+ F E
Sbjct: 61  FQLFAE 66