BLASTX nr result

ID: Zingiber23_contig00046798 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00046798
         (271 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003564965.1| PREDICTED: transcription factor TCP20-like [...    60   3e-07
ref|XP_006844624.1| hypothetical protein AMTR_s00016p00227430 [A...    59   9e-07
ref|XP_002456872.1| hypothetical protein SORBIDRAFT_03g044320 [S...    58   1e-06
ref|NP_001151775.1| TCP-domain protein [Zea mays] gi|195649617|g...    56   6e-06
ref|XP_006395493.1| hypothetical protein EUTSA_v10004391mg [Eutr...    55   7e-06
gb|ADL36832.1| TCP domain class transcription factor [Malus dome...    55   7e-06
ref|NP_001142396.1| TCP-domain protein [Zea mays] gi|194708622|g...    55   7e-06
gb|ACG43678.1| TCP-domain protein [Zea mays]                           55   1e-05
gb|ACG24718.1| TCP-domain protein [Zea mays]                           55   1e-05
ref|NP_001140365.1| TCP-domain protein isoform 1 [Zea mays] gi|1...    55   1e-05

>ref|XP_003564965.1| PREDICTED: transcription factor TCP20-like [Brachypodium
           distachyon]
          Length = 319

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 32/65 (49%), Positives = 38/65 (58%)
 Frame = -1

Query: 271 ELGLSQEAHIGVLNPQSLNQFYAQIGQAGGDPVDGTGHEQPHHDHQKRIPSPENDSEGSE 92
           ELGLSQE HIGVL  QS +QFY Q+G AGG       H Q HH HQ+  P  +   E  E
Sbjct: 247 ELGLSQEGHIGVLAAQSFSQFYHQVGGAGGSGQLQHPHPQQHHHHQQ--PQQQQQQEDGE 304

Query: 91  E*KPE 77
           + + E
Sbjct: 305 DERDE 309


>ref|XP_006844624.1| hypothetical protein AMTR_s00016p00227430 [Amborella trichopoda]
           gi|548847095|gb|ERN06299.1| hypothetical protein
           AMTR_s00016p00227430 [Amborella trichopoda]
          Length = 298

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 31/61 (50%), Positives = 44/61 (72%)
 Frame = -1

Query: 271 ELGLSQEAHIGVLNPQSLNQFYAQIGQAGGDPVDGTGHEQPHHDHQKRIPSPENDSEGSE 92
           ELGLS + HIGVL+ Q+L+QFY QIGQ+ G    G+ H Q  H +Q++ PS ++DS+GS 
Sbjct: 244 ELGLSPDGHIGVLSTQALSQFYQQIGQSRG----GSMHHQ--HQNQQQGPSSKDDSQGSR 297

Query: 91  E 89
           +
Sbjct: 298 Q 298


>ref|XP_002456872.1| hypothetical protein SORBIDRAFT_03g044320 [Sorghum bicolor]
           gi|241928847|gb|EES01992.1| hypothetical protein
           SORBIDRAFT_03g044320 [Sorghum bicolor]
          Length = 325

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 27/61 (44%), Positives = 37/61 (60%)
 Frame = -1

Query: 271 ELGLSQEAHIGVLNPQSLNQFYAQIGQAGGDPVDGTGHEQPHHDHQKRIPSPENDSEGSE 92
           ELGLSQ+ HIGVL  QS++QFY Q+G AGG       H   HH HQ++    ++  +G  
Sbjct: 260 ELGLSQDGHIGVLAAQSISQFYHQVGAAGGSGQMQHPHGHQHHHHQQQEDGEDDREDGES 319

Query: 91  E 89
           +
Sbjct: 320 D 320


>ref|NP_001151775.1| TCP-domain protein [Zea mays] gi|195649617|gb|ACG44276.1|
           TCP-domain protein [Zea mays]
          Length = 319

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 29/64 (45%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
 Frame = -1

Query: 271 ELGLSQEAHIGVLNPQSLNQFYAQIGQA---GGDPVDGTGHEQPHHDHQKRIPSPENDSE 101
           ELGLSQ+ HIGVL  QS++QFY Q+G A   GG      GH   HH  Q+       D E
Sbjct: 253 ELGLSQDGHIGVLAAQSISQFYHQVGAAAAGGGQMQHAHGHHHHHHQQQEDGEDDREDGE 312

Query: 100 GSEE 89
             +E
Sbjct: 313 SDDE 316


>ref|XP_006395493.1| hypothetical protein EUTSA_v10004391mg [Eutrema salsugineum]
           gi|557092132|gb|ESQ32779.1| hypothetical protein
           EUTSA_v10004391mg [Eutrema salsugineum]
          Length = 382

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 32/72 (44%), Positives = 40/72 (55%), Gaps = 13/72 (18%)
 Frame = -1

Query: 271 ELGLSQEAHIGVLNPQSLNQFYAQIG------------QAGGDPVDGTGHEQP-HHDHQK 131
           ELGLSQE ++GVLNPQS  Q Y Q+G            QA G  +  T H  P H DHQ+
Sbjct: 309 ELGLSQEGNVGVLNPQSFTQIYQQMGQAQAQAQAQALAQAQGRVLHHTLHHNPSHEDHQQ 368

Query: 130 RIPSPENDSEGS 95
                ++DS+GS
Sbjct: 369 ESGEKDDDSQGS 380


>gb|ADL36832.1| TCP domain class transcription factor [Malus domestica]
          Length = 315

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 28/59 (47%), Positives = 38/59 (64%)
 Frame = -1

Query: 271 ELGLSQEAHIGVLNPQSLNQFYAQIGQAGGDPVDGTGHEQPHHDHQKRIPSPENDSEGS 95
           ELGLSQ+ HIGVLN Q+L+Q Y Q+G A         H+QP   H ++ P  ++DS+GS
Sbjct: 262 ELGLSQDGHIGVLNSQALSQIYQQMGHA-------RVHQQPPQHHHQQQPPSKDDSQGS 313


>ref|NP_001142396.1| TCP-domain protein [Zea mays] gi|194708622|gb|ACF88395.1| unknown
           [Zea mays] gi|413951457|gb|AFW84106.1| TCP-domain
           protein [Zea mays]
          Length = 315

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 29/64 (45%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
 Frame = -1

Query: 271 ELGLSQEAHIGVLNPQSLNQFYAQIGQA---GGDPVDGTGHEQPHHDHQKRIPSPENDSE 101
           ELGLSQ+ HIGVL  QS++QFY Q+G A   GG      GH   HH  Q+       D E
Sbjct: 249 ELGLSQDGHIGVLAAQSISQFYHQVGAAAGGGGQMHHAHGHHHHHHQQQEDGEDDREDGE 308

Query: 100 GSEE 89
             +E
Sbjct: 309 SDDE 312


>gb|ACG43678.1| TCP-domain protein [Zea mays]
          Length = 324

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 29/61 (47%), Positives = 35/61 (57%)
 Frame = -1

Query: 271 ELGLSQEAHIGVLNPQSLNQFYAQIGQAGGDPVDGTGHEQPHHDHQKRIPSPENDSEGSE 92
           ELGLSQ+ HIGVL  QS++QFY Q+G A G    G+G  Q  H HQ      + D E   
Sbjct: 258 ELGLSQDGHIGVLAAQSISQFYHQVGAAAG----GSGQMQHPHGHQHHHHQQQEDGEDDR 313

Query: 91  E 89
           E
Sbjct: 314 E 314


>gb|ACG24718.1| TCP-domain protein [Zea mays]
          Length = 327

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 29/61 (47%), Positives = 35/61 (57%)
 Frame = -1

Query: 271 ELGLSQEAHIGVLNPQSLNQFYAQIGQAGGDPVDGTGHEQPHHDHQKRIPSPENDSEGSE 92
           ELGLSQ+ HIGVL  QS++QFY Q+G A G    G+G  Q  H HQ      + D E   
Sbjct: 261 ELGLSQDGHIGVLAAQSISQFYHQVGAAAG----GSGQMQHPHGHQHHHHQQQEDGEDDR 316

Query: 91  E 89
           E
Sbjct: 317 E 317


>ref|NP_001140365.1| TCP-domain protein isoform 1 [Zea mays] gi|194699186|gb|ACF83677.1|
           unknown [Zea mays] gi|224032339|gb|ACN35245.1| unknown
           [Zea mays] gi|414878932|tpg|DAA56063.1| TPA: TCP-domain
           protein isoform 1 [Zea mays]
           gi|414878933|tpg|DAA56064.1| TPA: TCP-domain protein
           isoform 2 [Zea mays]
          Length = 324

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 29/61 (47%), Positives = 35/61 (57%)
 Frame = -1

Query: 271 ELGLSQEAHIGVLNPQSLNQFYAQIGQAGGDPVDGTGHEQPHHDHQKRIPSPENDSEGSE 92
           ELGLSQ+ HIGVL  QS++QFY Q+G A G    G+G  Q  H HQ      + D E   
Sbjct: 258 ELGLSQDGHIGVLAAQSISQFYHQVGAAAG----GSGQMQHPHGHQHHHHQQQEDGEDDR 313

Query: 91  E 89
           E
Sbjct: 314 E 314


Top