BLASTX nr result

ID: Zingiber23_contig00046786 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00046786
         (251 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAZ23574.1| hypothetical protein OsJ_07273 [Oryza sativa Japo...    55   1e-05

>gb|EAZ23574.1| hypothetical protein OsJ_07273 [Oryza sativa Japonica Group]
          Length = 325

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 33/85 (38%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
 Frame = +2

Query: 8   TMPEPILNTRRAWGXXXXXXXXXXXXXXKQWILPMNAGRDYRV----SQQKGXXXXXXXX 175
           T  EPI ++ RAW               KQ   P + G  +      S QKG        
Sbjct: 190 TRQEPIKSSTRAWSPDDAFRPQSLPSLSKQVSFPASMGNCWVAMGIGSAQKGVPSKPTSC 249

Query: 176 XXXYEDLDLTDLSFLPCSCGFRLCL 250
              YEDLD TD SFLPC CGF LCL
Sbjct: 250 PICYEDLDPTDSSFLPCPCGFHLCL 274


Top