BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00046710
         (633 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37515.3| unnamed protein product [Vitis vinifera]              392   e-107
ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis ...   392   e-107
ref|XP_006341743.1| PREDICTED: DNA topoisomerase 3-alpha-like [S...   384   e-104
ref|XP_004985595.1| PREDICTED: DNA topoisomerase 3-alpha-like [S...   382   e-104
ref|NP_001173278.1| Os03g0165000 [Oryza sativa Japonica Group] g...   381   e-104
ref|XP_004239191.1| PREDICTED: DNA topoisomerase 3-alpha-like [S...   380   e-103
ref|XP_006649448.1| PREDICTED: DNA topoisomerase 3-alpha-like [O...   378   e-103
gb|EEC84165.1| hypothetical protein OsI_30540 [Oryza sativa Indi...   377   e-102
tpg|DAA43539.1| TPA: hypothetical protein ZEAMMB73_751776 [Zea m...   375   e-102
tpg|DAA43538.1| TPA: hypothetical protein ZEAMMB73_751776 [Zea m...   375   e-102
ref|XP_003558748.1| PREDICTED: DNA topoisomerase 3-alpha [Brachy...   375   e-102
ref|XP_002465810.1| hypothetical protein SORBIDRAFT_01g046210 [S...   374   e-101
ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ric...   372   e-101
gb|EMT33584.1| DNA topoisomerase 3-alpha [Aegilops tauschii]          372   e-101
ref|XP_004502963.1| PREDICTED: DNA topoisomerase 3-alpha-like [C...   371   e-100
ref|XP_002307047.1| hypothetical protein POPTR_0005s06810g [Popu...   370   e-100
ref|XP_004289288.1| PREDICTED: DNA topoisomerase 3-alpha-like [F...   369   e-100
gb|EOX92638.1| Topoisomerase 3alpha isoform 2, partial [Theobrom...   368   e-100
gb|EOX92637.1| Topoisomerase 3alpha isoform 1 [Theobroma cacao]       368   e-100
ref|XP_003602653.1| DNA topoisomerase [Medicago truncatula] gi|3...   368   e-100

>emb|CBI37515.3| unnamed protein product [Vitis vinifera]
          Length = 373

 Score =  392 bits (1007), Expect = e-107
 Identities = 180/210 (85%), Positives = 194/210 (92%)
 Frame = +3

Query: 3   GHLMELEFEDRFRKWHSCDPVDLYNAPVRKFVPEDKLDIKKTLEEEARKCQWLVLWLDCD 182
           GHLMELEFEDRFRKWHSCDP  LY+APVRKFVPEDKLDIK+TLEEEARKCQWLVLWLDCD
Sbjct: 59  GHLMELEFEDRFRKWHSCDPAHLYHAPVRKFVPEDKLDIKRTLEEEARKCQWLVLWLDCD 118

Query: 183 REGENIAFEVIEVCTAANDNLNIWRARFSALIDREIHYSVQNLARPNKLFSDAVDARQEI 362
           REGENIAFEV+EVC   N ++++WRARFSALIDREIH SVQNL RPN+LF+DAVD RQEI
Sbjct: 119 REGENIAFEVLEVCAQVNRHIDVWRARFSALIDREIHESVQNLVRPNQLFADAVDVRQEI 178

Query: 363 DLRIGASFTRFQTMLIKDSFVLDFAGDGRNLVLSYGPCQFPTLGFIVERYWEIQSHEAEE 542
           DLRIGASFTRFQTML++D+FVLDFA D RNLVLSYGPCQFPTLGF+VERYWEIQSHE EE
Sbjct: 179 DLRIGASFTRFQTMLLRDAFVLDFAADDRNLVLSYGPCQFPTLGFVVERYWEIQSHEPEE 238

Query: 543 FWTINCSHTSDEGTANFNWMRVHLFDYTSA 632
           FWTINCSH SDEGT+ FNWMR HLFDYT A
Sbjct: 239 FWTINCSHKSDEGTSTFNWMRAHLFDYTCA 268


>ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis vinifera]
          Length = 914

 Score =  392 bits (1007), Expect = e-107
 Identities = 180/210 (85%), Positives = 194/210 (92%)
 Frame = +3

Query: 3   GHLMELEFEDRFRKWHSCDPVDLYNAPVRKFVPEDKLDIKKTLEEEARKCQWLVLWLDCD 182
           GHLMELEFEDRFRKWHSCDP  LY+APVRKFVPEDKLDIK+TLEEEARKCQWLVLWLDCD
Sbjct: 59  GHLMELEFEDRFRKWHSCDPAHLYHAPVRKFVPEDKLDIKRTLEEEARKCQWLVLWLDCD 118

Query: 183 REGENIAFEVIEVCTAANDNLNIWRARFSALIDREIHYSVQNLARPNKLFSDAVDARQEI 362
           REGENIAFEV+EVC   N ++++WRARFSALIDREIH SVQNL RPN+LF+DAVD RQEI
Sbjct: 119 REGENIAFEVLEVCAQVNRHIDVWRARFSALIDREIHESVQNLVRPNQLFADAVDVRQEI 178

Query: 363 DLRIGASFTRFQTMLIKDSFVLDFAGDGRNLVLSYGPCQFPTLGFIVERYWEIQSHEAEE 542
           DLRIGASFTRFQTML++D+FVLDFA D RNLVLSYGPCQFPTLGF+VERYWEIQSHE EE
Sbjct: 179 DLRIGASFTRFQTMLLRDAFVLDFAADDRNLVLSYGPCQFPTLGFVVERYWEIQSHEPEE 238

Query: 543 FWTINCSHTSDEGTANFNWMRVHLFDYTSA 632
           FWTINCSH SDEGT+ FNWMR HLFDYT A
Sbjct: 239 FWTINCSHKSDEGTSTFNWMRAHLFDYTCA 268


>ref|XP_006341743.1| PREDICTED: DNA topoisomerase 3-alpha-like [Solanum tuberosum]
          Length = 915

 Score =  384 bits (985), Expect = e-104
 Identities = 174/208 (83%), Positives = 192/208 (92%)
 Frame = +3

Query: 3   GHLMELEFEDRFRKWHSCDPVDLYNAPVRKFVPEDKLDIKKTLEEEARKCQWLVLWLDCD 182
           GHLMELEF++R+RKWHSCDP+DLYNAPVRKFVPEDKLDIK+TLE EAR CQW+VLWLDCD
Sbjct: 69  GHLMELEFDERYRKWHSCDPLDLYNAPVRKFVPEDKLDIKRTLEAEARSCQWIVLWLDCD 128

Query: 183 REGENIAFEVIEVCTAANDNLNIWRARFSALIDREIHYSVQNLARPNKLFSDAVDARQEI 362
           REGENIAFEV++VC  AN NLN+WRARFSALIDREIH SVQ L +PN+LFSDAVD RQEI
Sbjct: 129 REGENIAFEVLDVCRQANHNLNVWRARFSALIDREIHQSVQTLVQPNQLFSDAVDVRQEI 188

Query: 363 DLRIGASFTRFQTMLIKDSFVLDFAGDGRNLVLSYGPCQFPTLGFIVERYWEIQSHEAEE 542
           DLRIGASFTRFQTML++ +FVLDFA D RN+VLSYGPCQFPTLGF+VERYWEIQ+HE EE
Sbjct: 189 DLRIGASFTRFQTMLLRGAFVLDFATDDRNIVLSYGPCQFPTLGFVVERYWEIQAHEPEE 248

Query: 543 FWTINCSHTSDEGTANFNWMRVHLFDYT 626
           FWTINC+H SDEGTA FNWMR HLFDYT
Sbjct: 249 FWTINCTHNSDEGTATFNWMRGHLFDYT 276


>ref|XP_004985595.1| PREDICTED: DNA topoisomerase 3-alpha-like [Setaria italica]
          Length = 917

 Score =  382 bits (980), Expect = e-104
 Identities = 176/210 (83%), Positives = 195/210 (92%)
 Frame = +3

Query: 3   GHLMELEFEDRFRKWHSCDPVDLYNAPVRKFVPEDKLDIKKTLEEEARKCQWLVLWLDCD 182
           GHLMELEF+DRFR+WHSCDP DL++APVRK VP+DK  IK+TLEEEAR+CQWLVLWLDCD
Sbjct: 67  GHLMELEFDDRFRRWHSCDPADLFHAPVRKSVPQDKQAIKQTLEEEARRCQWLVLWLDCD 126

Query: 183 REGENIAFEVIEVCTAANDNLNIWRARFSALIDREIHYSVQNLARPNKLFSDAVDARQEI 362
           REGENIA+EVIEVCT AN +LNIWRARFSALIDREIH SVQ+L RPNKLF+DAVDARQEI
Sbjct: 127 REGENIAYEVIEVCTGANSHLNIWRARFSALIDREIHESVQHLGRPNKLFADAVDARQEI 186

Query: 363 DLRIGASFTRFQTMLIKDSFVLDFAGDGRNLVLSYGPCQFPTLGFIVERYWEIQSHEAEE 542
           DLRIGASFTRFQTML+KD+FV+D  GD RNLVLSYGPCQFPTLGFIVER+WEIQ+HE EE
Sbjct: 187 DLRIGASFTRFQTMLLKDAFVIDVTGDDRNLVLSYGPCQFPTLGFIVERFWEIQAHEPEE 246

Query: 543 FWTINCSHTSDEGTANFNWMRVHLFDYTSA 632
           FWTINC+HTSDEGTA+F W+R HLFDY SA
Sbjct: 247 FWTINCTHTSDEGTASFGWIRGHLFDYPSA 276


>ref|NP_001173278.1| Os03g0165000 [Oryza sativa Japonica Group]
           gi|255674230|dbj|BAH92006.1| Os03g0165000 [Oryza sativa
           Japonica Group]
          Length = 928

 Score =  381 bits (979), Expect = e-104
 Identities = 174/210 (82%), Positives = 195/210 (92%)
 Frame = +3

Query: 3   GHLMELEFEDRFRKWHSCDPVDLYNAPVRKFVPEDKLDIKKTLEEEARKCQWLVLWLDCD 182
           GHLMELEF+DRFR+WHSCDP DL++APVRK VP+DK DIK+TLEEEARKCQWLVLWLDCD
Sbjct: 69  GHLMELEFDDRFRRWHSCDPADLFHAPVRKSVPQDKQDIKRTLEEEARKCQWLVLWLDCD 128

Query: 183 REGENIAFEVIEVCTAANDNLNIWRARFSALIDREIHYSVQNLARPNKLFSDAVDARQEI 362
           REGENIA+EVI++C  AN  LNIWRARFSALIDREIH +VQ+L RPNKLF+DAVDARQEI
Sbjct: 129 REGENIAYEVIDICAGANSRLNIWRARFSALIDREIHEAVQHLDRPNKLFADAVDARQEI 188

Query: 363 DLRIGASFTRFQTMLIKDSFVLDFAGDGRNLVLSYGPCQFPTLGFIVERYWEIQSHEAEE 542
           DLRIGASFTRFQTML+KD+FVLD  GD RN++LSYGPCQFPTLGFIVER+WEIQ+HE EE
Sbjct: 189 DLRIGASFTRFQTMLLKDAFVLDDTGDDRNIILSYGPCQFPTLGFIVERFWEIQAHEPEE 248

Query: 543 FWTINCSHTSDEGTANFNWMRVHLFDYTSA 632
           FWTINCSHTSDEGTA+F W+R HLFDY+SA
Sbjct: 249 FWTINCSHTSDEGTASFGWIRGHLFDYSSA 278


>ref|XP_004239191.1| PREDICTED: DNA topoisomerase 3-alpha-like [Solanum lycopersicum]
          Length = 910

 Score =  380 bits (975), Expect = e-103
 Identities = 171/208 (82%), Positives = 190/208 (91%)
 Frame = +3

Query: 3   GHLMELEFEDRFRKWHSCDPVDLYNAPVRKFVPEDKLDIKKTLEEEARKCQWLVLWLDCD 182
           GHLME+EF +R+RKWHSCDP+DLYNAP+RKFVPEDKLDIK+TLE EAR CQW++LWLDCD
Sbjct: 69  GHLMEIEFHERYRKWHSCDPLDLYNAPIRKFVPEDKLDIKRTLEAEARSCQWIILWLDCD 128

Query: 183 REGENIAFEVIEVCTAANDNLNIWRARFSALIDREIHYSVQNLARPNKLFSDAVDARQEI 362
           REGENIAFEV++VC  AN NL +WRARFSALIDREIH SVQ L +PN+LFSDAVD RQEI
Sbjct: 129 REGENIAFEVLDVCRQANHNLTVWRARFSALIDREIHQSVQTLVQPNQLFSDAVDVRQEI 188

Query: 363 DLRIGASFTRFQTMLIKDSFVLDFAGDGRNLVLSYGPCQFPTLGFIVERYWEIQSHEAEE 542
           DLRIGASFTRFQTML++ +FVLDFA D RNLVLSYGPCQFPTLGF+VERYWEIQ+HE EE
Sbjct: 189 DLRIGASFTRFQTMLLRGAFVLDFATDDRNLVLSYGPCQFPTLGFVVERYWEIQAHEPEE 248

Query: 543 FWTINCSHTSDEGTANFNWMRVHLFDYT 626
           FWTINC+H SDEGTA FNWMR HLFDYT
Sbjct: 249 FWTINCTHNSDEGTATFNWMRGHLFDYT 276


>ref|XP_006649448.1| PREDICTED: DNA topoisomerase 3-alpha-like [Oryza brachyantha]
          Length = 923

 Score =  378 bits (971), Expect = e-103
 Identities = 172/210 (81%), Positives = 195/210 (92%)
 Frame = +3

Query: 3   GHLMELEFEDRFRKWHSCDPVDLYNAPVRKFVPEDKLDIKKTLEEEARKCQWLVLWLDCD 182
           GHLMELEF+DRFR+WHSCDP DL++APVRK VP+DK DIK+TLEEEAR CQWLVLWLDCD
Sbjct: 69  GHLMELEFDDRFRRWHSCDPADLFHAPVRKSVPQDKQDIKRTLEEEARNCQWLVLWLDCD 128

Query: 183 REGENIAFEVIEVCTAANDNLNIWRARFSALIDREIHYSVQNLARPNKLFSDAVDARQEI 362
           REGENIA+EVI++C+ AN  LNIWRARFSALIDREIH +VQ+L RPNKLF+DAVDARQEI
Sbjct: 129 REGENIAYEVIDICSGANSRLNIWRARFSALIDREIHEAVQHLDRPNKLFADAVDARQEI 188

Query: 363 DLRIGASFTRFQTMLIKDSFVLDFAGDGRNLVLSYGPCQFPTLGFIVERYWEIQSHEAEE 542
           DLRIGASFTRFQTML++D+FVLD  GD RN++LSYGPCQFPTLGFIVER+WEIQ+HE EE
Sbjct: 189 DLRIGASFTRFQTMLLRDAFVLDDTGDERNMILSYGPCQFPTLGFIVERFWEIQAHEPEE 248

Query: 543 FWTINCSHTSDEGTANFNWMRVHLFDYTSA 632
           FWTINCSHTSDEGTA+F W+R HLFDY+SA
Sbjct: 249 FWTINCSHTSDEGTASFGWIRGHLFDYSSA 278


>gb|EEC84165.1| hypothetical protein OsI_30540 [Oryza sativa Indica Group]
          Length = 897

 Score =  377 bits (967), Expect = e-102
 Identities = 172/210 (81%), Positives = 194/210 (92%)
 Frame = +3

Query: 3   GHLMELEFEDRFRKWHSCDPVDLYNAPVRKFVPEDKLDIKKTLEEEARKCQWLVLWLDCD 182
           GHLMELEF+DRFR+WHSCDP DL++APVRK VP+DK DIK+TLEEEARKCQWLVLWLDCD
Sbjct: 69  GHLMELEFDDRFRRWHSCDPADLFHAPVRKSVPQDKQDIKRTLEEEARKCQWLVLWLDCD 128

Query: 183 REGENIAFEVIEVCTAANDNLNIWRARFSALIDREIHYSVQNLARPNKLFSDAVDARQEI 362
           REGENIA+EVI++C  AN  LNIWRA FSALIDREIH +VQ+L RPNKLF+DAVDARQEI
Sbjct: 129 REGENIAYEVIDICAGANSRLNIWRACFSALIDREIHEAVQHLDRPNKLFADAVDARQEI 188

Query: 363 DLRIGASFTRFQTMLIKDSFVLDFAGDGRNLVLSYGPCQFPTLGFIVERYWEIQSHEAEE 542
           DLRIGASFTRFQT+L+KD+FVLD  GD RN++LSYGPCQFPTLGFIVER+WEIQ+HE EE
Sbjct: 189 DLRIGASFTRFQTVLLKDAFVLDDTGDDRNIILSYGPCQFPTLGFIVERFWEIQAHEPEE 248

Query: 543 FWTINCSHTSDEGTANFNWMRVHLFDYTSA 632
           FWTINCSHTSDEGTA+F W+R HLFDY+SA
Sbjct: 249 FWTINCSHTSDEGTASFGWIRGHLFDYSSA 278


>tpg|DAA43539.1| TPA: hypothetical protein ZEAMMB73_751776 [Zea mays]
          Length = 329

 Score =  375 bits (963), Expect = e-102
 Identities = 172/210 (81%), Positives = 195/210 (92%)
 Frame = +3

Query: 3   GHLMELEFEDRFRKWHSCDPVDLYNAPVRKFVPEDKLDIKKTLEEEARKCQWLVLWLDCD 182
           GHLMELEF+DRFR+WHSCDP +L++APVRK VP+DK  IK+TLEEEAR+CQWLVLWLDCD
Sbjct: 66  GHLMELEFDDRFRRWHSCDPAELFHAPVRKSVPQDKQAIKQTLEEEARRCQWLVLWLDCD 125

Query: 183 REGENIAFEVIEVCTAANDNLNIWRARFSALIDREIHYSVQNLARPNKLFSDAVDARQEI 362
           REGENIA+EVI+VCT AN +LNIWRARFSALIDREIH SVQ+L RPNKLF+DAVDARQEI
Sbjct: 126 REGENIAYEVIDVCTRANSHLNIWRARFSALIDREIHESVQHLGRPNKLFADAVDARQEI 185

Query: 363 DLRIGASFTRFQTMLIKDSFVLDFAGDGRNLVLSYGPCQFPTLGFIVERYWEIQSHEAEE 542
           DLRIGASFTRFQTML+KD+FV+D  GD R+LVLSYGPCQFPTLGFIVER+WEIQ+HE EE
Sbjct: 186 DLRIGASFTRFQTMLLKDAFVIDVTGDERSLVLSYGPCQFPTLGFIVERFWEIQAHEPEE 245

Query: 543 FWTINCSHTSDEGTANFNWMRVHLFDYTSA 632
           FWTINC+HTSDEGTA+F W+R HLFDY+ A
Sbjct: 246 FWTINCTHTSDEGTASFGWIRGHLFDYSCA 275


>tpg|DAA43538.1| TPA: hypothetical protein ZEAMMB73_751776 [Zea mays]
          Length = 915

 Score =  375 bits (963), Expect = e-102
 Identities = 172/210 (81%), Positives = 195/210 (92%)
 Frame = +3

Query: 3   GHLMELEFEDRFRKWHSCDPVDLYNAPVRKFVPEDKLDIKKTLEEEARKCQWLVLWLDCD 182
           GHLMELEF+DRFR+WHSCDP +L++APVRK VP+DK  IK+TLEEEAR+CQWLVLWLDCD
Sbjct: 66  GHLMELEFDDRFRRWHSCDPAELFHAPVRKSVPQDKQAIKQTLEEEARRCQWLVLWLDCD 125

Query: 183 REGENIAFEVIEVCTAANDNLNIWRARFSALIDREIHYSVQNLARPNKLFSDAVDARQEI 362
           REGENIA+EVI+VCT AN +LNIWRARFSALIDREIH SVQ+L RPNKLF+DAVDARQEI
Sbjct: 126 REGENIAYEVIDVCTRANSHLNIWRARFSALIDREIHESVQHLGRPNKLFADAVDARQEI 185

Query: 363 DLRIGASFTRFQTMLIKDSFVLDFAGDGRNLVLSYGPCQFPTLGFIVERYWEIQSHEAEE 542
           DLRIGASFTRFQTML+KD+FV+D  GD R+LVLSYGPCQFPTLGFIVER+WEIQ+HE EE
Sbjct: 186 DLRIGASFTRFQTMLLKDAFVIDVTGDERSLVLSYGPCQFPTLGFIVERFWEIQAHEPEE 245

Query: 543 FWTINCSHTSDEGTANFNWMRVHLFDYTSA 632
           FWTINC+HTSDEGTA+F W+R HLFDY+ A
Sbjct: 246 FWTINCTHTSDEGTASFGWIRGHLFDYSCA 275


>ref|XP_003558748.1| PREDICTED: DNA topoisomerase 3-alpha [Brachypodium distachyon]
          Length = 924

 Score =  375 bits (962), Expect = e-102
 Identities = 170/210 (80%), Positives = 196/210 (93%)
 Frame = +3

Query: 3   GHLMELEFEDRFRKWHSCDPVDLYNAPVRKFVPEDKLDIKKTLEEEARKCQWLVLWLDCD 182
           GHLMEL+F+DR+R+W+SCDPV+L++APVRK VP+DKLDIK+TLEEEAR CQWLVLWLDCD
Sbjct: 68  GHLMELDFDDRYRRWYSCDPVELFHAPVRKAVPQDKLDIKRTLEEEARTCQWLVLWLDCD 127

Query: 183 REGENIAFEVIEVCTAANDNLNIWRARFSALIDREIHYSVQNLARPNKLFSDAVDARQEI 362
           REGENIA+EV+E+C   N  LNIWRARFSALIDREIH +VQ+L RPNKLF+DAVDARQEI
Sbjct: 128 REGENIAYEVVEICAGVNHCLNIWRARFSALIDREIHEAVQHLGRPNKLFADAVDARQEI 187

Query: 363 DLRIGASFTRFQTMLIKDSFVLDFAGDGRNLVLSYGPCQFPTLGFIVERYWEIQSHEAEE 542
           DLRIGASFTRFQTML+KD+FVLD +G+ RN+VLSYGPCQFPTLGFIVER+WEIQ+HE EE
Sbjct: 188 DLRIGASFTRFQTMLLKDAFVLDVSGEERNMVLSYGPCQFPTLGFIVERFWEIQAHEPEE 247

Query: 543 FWTINCSHTSDEGTANFNWMRVHLFDYTSA 632
           FWTINCSHTSDEGTA+F W+R HLFDY+SA
Sbjct: 248 FWTINCSHTSDEGTASFGWIRGHLFDYSSA 277


>ref|XP_002465810.1| hypothetical protein SORBIDRAFT_01g046210 [Sorghum bicolor]
           gi|241919664|gb|EER92808.1| hypothetical protein
           SORBIDRAFT_01g046210 [Sorghum bicolor]
          Length = 860

 Score =  374 bits (961), Expect = e-101
 Identities = 171/210 (81%), Positives = 195/210 (92%)
 Frame = +3

Query: 3   GHLMELEFEDRFRKWHSCDPVDLYNAPVRKFVPEDKLDIKKTLEEEARKCQWLVLWLDCD 182
           GHLMELEF++RFR+WHSCDP +L++APVRK VP+DK  IK+TLEEEAR+CQWLVLWLDCD
Sbjct: 66  GHLMELEFDERFRRWHSCDPAELFHAPVRKSVPQDKQAIKQTLEEEARRCQWLVLWLDCD 125

Query: 183 REGENIAFEVIEVCTAANDNLNIWRARFSALIDREIHYSVQNLARPNKLFSDAVDARQEI 362
           REGENIA+EVI+VCT AN +LNIWRARFSALIDREIH SVQ+L RPNKLF+DAVDARQEI
Sbjct: 126 REGENIAYEVIDVCTGANSHLNIWRARFSALIDREIHESVQHLGRPNKLFADAVDARQEI 185

Query: 363 DLRIGASFTRFQTMLIKDSFVLDFAGDGRNLVLSYGPCQFPTLGFIVERYWEIQSHEAEE 542
           DLRIGASFTRFQTML+KD+FV++  GD RNLVLSYGPCQFPTLGFIVER+WEIQ+HE EE
Sbjct: 186 DLRIGASFTRFQTMLLKDAFVINVTGDDRNLVLSYGPCQFPTLGFIVERFWEIQAHEPEE 245

Query: 543 FWTINCSHTSDEGTANFNWMRVHLFDYTSA 632
           FWTINC+HTSDEGTA+F W+R HLFDY+ A
Sbjct: 246 FWTINCTHTSDEGTASFGWIRGHLFDYSCA 275


>ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
           gi|223533243|gb|EEF34998.1| prokaryotic DNA
           topoisomerase, putative [Ricinus communis]
          Length = 833

 Score =  372 bits (956), Expect = e-101
 Identities = 173/210 (82%), Positives = 191/210 (90%)
 Frame = +3

Query: 3   GHLMELEFEDRFRKWHSCDPVDLYNAPVRKFVPEDKLDIKKTLEEEARKCQWLVLWLDCD 182
           GHLMELEF+DRFRKWHSCDP DLY+APVRKFVPEDK +IK+TLEEEAR+CQWL+LWLDCD
Sbjct: 62  GHLMELEFDDRFRKWHSCDPADLYHAPVRKFVPEDKTNIKRTLEEEARRCQWLILWLDCD 121

Query: 183 REGENIAFEVIEVCTAANDNLNIWRARFSALIDREIHYSVQNLARPNKLFSDAVDARQEI 362
           REGENIAFEV++VC +AN  L + RARFSALIDREIH + QNL  PN+ FSDAVDARQEI
Sbjct: 122 REGENIAFEVVDVCRSANRYLTVRRARFSALIDREIHEAAQNLVSPNQWFSDAVDARQEI 181

Query: 363 DLRIGASFTRFQTMLIKDSFVLDFAGDGRNLVLSYGPCQFPTLGFIVERYWEIQSHEAEE 542
           DLRIGASFTRFQT+L++D FV+D A D RNLVLSYGPCQFPTLGFIVERYWEIQSHE+EE
Sbjct: 182 DLRIGASFTRFQTLLLRDKFVIDSAQDDRNLVLSYGPCQFPTLGFIVERYWEIQSHESEE 241

Query: 543 FWTINCSHTSDEGTANFNWMRVHLFDYTSA 632
           FWTINCSHTS EG ANF+WMR HLFDYTSA
Sbjct: 242 FWTINCSHTSVEGIANFSWMRGHLFDYTSA 271


>gb|EMT33584.1| DNA topoisomerase 3-alpha [Aegilops tauschii]
          Length = 745

 Score =  372 bits (955), Expect = e-101
 Identities = 169/210 (80%), Positives = 196/210 (93%)
 Frame = +3

Query: 3   GHLMELEFEDRFRKWHSCDPVDLYNAPVRKFVPEDKLDIKKTLEEEARKCQWLVLWLDCD 182
           GHLMEL+F+DR+R+W+SCDP +L++APVRK VP+DK DIK+TLEEEAR CQWLVLWLDCD
Sbjct: 34  GHLMELDFDDRYRRWYSCDPAELFHAPVRKAVPQDKQDIKRTLEEEARTCQWLVLWLDCD 93

Query: 183 REGENIAFEVIEVCTAANDNLNIWRARFSALIDREIHYSVQNLARPNKLFSDAVDARQEI 362
           REGENIA+EV+++C  AN NLNIWRARFSALI REIH +VQ+LARPNKLF+DAVDARQEI
Sbjct: 94  REGENIAYEVVDICAGANRNLNIWRARFSALIPREIHEAVQHLARPNKLFADAVDARQEI 153

Query: 363 DLRIGASFTRFQTMLIKDSFVLDFAGDGRNLVLSYGPCQFPTLGFIVERYWEIQSHEAEE 542
           DLRIGASFTRFQTML+KD+FVLD +G+ RN+VLSYGPCQFPTLGFIVER+WEIQ+HE EE
Sbjct: 154 DLRIGASFTRFQTMLLKDAFVLDVSGEERNMVLSYGPCQFPTLGFIVERFWEIQAHEPEE 213

Query: 543 FWTINCSHTSDEGTANFNWMRVHLFDYTSA 632
           FWTINCSHTSDEGTA+F W+R HLFDY+SA
Sbjct: 214 FWTINCSHTSDEGTASFIWIRGHLFDYSSA 243


>ref|XP_004502963.1| PREDICTED: DNA topoisomerase 3-alpha-like [Cicer arietinum]
          Length = 920

 Score =  371 bits (952), Expect = e-100
 Identities = 171/210 (81%), Positives = 190/210 (90%)
 Frame = +3

Query: 3   GHLMELEFEDRFRKWHSCDPVDLYNAPVRKFVPEDKLDIKKTLEEEARKCQWLVLWLDCD 182
           GHLMELEFEDR+RKWHSCDP DLY+APVRK VPEDK DIK+TLEEEAR+CQWLVLWLDCD
Sbjct: 64  GHLMELEFEDRYRKWHSCDPADLYHAPVRKSVPEDKKDIKRTLEEEARRCQWLVLWLDCD 123

Query: 183 REGENIAFEVIEVCTAANDNLNIWRARFSALIDREIHYSVQNLARPNKLFSDAVDARQEI 362
           REGENIAFEV++VCTAAN +L I RARFSALIDREIH +VQNL  PNK F+DAVDARQEI
Sbjct: 124 REGENIAFEVVDVCTAANPHLTIKRARFSALIDREIHQAVQNLVEPNKWFADAVDARQEI 183

Query: 363 DLRIGASFTRFQTMLIKDSFVLDFAGDGRNLVLSYGPCQFPTLGFIVERYWEIQSHEAEE 542
           DLRIGASFTRFQTML+KD+F++D   D RN++LSYGPCQFPTLGF+VERYWEIQ+HE EE
Sbjct: 184 DLRIGASFTRFQTMLMKDAFIIDTITDDRNIILSYGPCQFPTLGFVVERYWEIQAHEPEE 243

Query: 543 FWTINCSHTSDEGTANFNWMRVHLFDYTSA 632
           FW+INCSH SDEG ANF+W R HLFDYT A
Sbjct: 244 FWSINCSHRSDEGVANFSWGRGHLFDYTCA 273


>ref|XP_002307047.1| hypothetical protein POPTR_0005s06810g [Populus trichocarpa]
           gi|222856496|gb|EEE94043.1| hypothetical protein
           POPTR_0005s06810g [Populus trichocarpa]
          Length = 910

 Score =  370 bits (951), Expect = e-100
 Identities = 172/210 (81%), Positives = 188/210 (89%)
 Frame = +3

Query: 3   GHLMELEFEDRFRKWHSCDPVDLYNAPVRKFVPEDKLDIKKTLEEEARKCQWLVLWLDCD 182
           GHLME+EFEDRFRKWHSCDP DLY APVRK+VPEDKLDIK+TLEEEAR+C WLVLWLDCD
Sbjct: 59  GHLMEVEFEDRFRKWHSCDPADLYTAPVRKYVPEDKLDIKRTLEEEARRCHWLVLWLDCD 118

Query: 183 REGENIAFEVIEVCTAANDNLNIWRARFSALIDREIHYSVQNLARPNKLFSDAVDARQEI 362
           REGENIAFEV+EVC   N NL I RARFSALI+R+IH + QNL  PN+ FSDAVDARQEI
Sbjct: 119 REGENIAFEVMEVCKGVNRNLTIRRARFSALIERDIHEAAQNLIAPNQWFSDAVDARQEI 178

Query: 363 DLRIGASFTRFQTMLIKDSFVLDFAGDGRNLVLSYGPCQFPTLGFIVERYWEIQSHEAEE 542
           DLRIGASFTRFQTML++D FV+D A D RNLVLSYGPCQFPTLGF+VERYWEIQSHE EE
Sbjct: 179 DLRIGASFTRFQTMLLRDRFVIDSAQDDRNLVLSYGPCQFPTLGFVVERYWEIQSHEPEE 238

Query: 543 FWTINCSHTSDEGTANFNWMRVHLFDYTSA 632
           FWTINC+H SDEG A+FNWMR HLFDYTS+
Sbjct: 239 FWTINCTHRSDEGLASFNWMRGHLFDYTSS 268


>ref|XP_004289288.1| PREDICTED: DNA topoisomerase 3-alpha-like [Fragaria vesca subsp.
           vesca]
          Length = 908

 Score =  369 bits (947), Expect = e-100
 Identities = 174/210 (82%), Positives = 188/210 (89%)
 Frame = +3

Query: 3   GHLMELEFEDRFRKWHSCDPVDLYNAPVRKFVPEDKLDIKKTLEEEARKCQWLVLWLDCD 182
           GHLMELEFEDRFRKWHSCDP  L+ APVRKFVPEDKLDIK+TLEEEAR CQWLVLWLDCD
Sbjct: 60  GHLMELEFEDRFRKWHSCDPALLFQAPVRKFVPEDKLDIKRTLEEEARNCQWLVLWLDCD 119

Query: 183 REGENIAFEVIEVCTAANDNLNIWRARFSALIDREIHYSVQNLARPNKLFSDAVDARQEI 362
           REGENIAFEVI+VCT+ N +L I RARFSALIDR+IH++VQNL   NK F+DAVDARQEI
Sbjct: 120 REGENIAFEVIDVCTSVNRHLTIKRARFSALIDRDIHHAVQNLDNANKYFADAVDARQEI 179

Query: 363 DLRIGASFTRFQTMLIKDSFVLDFAGDGRNLVLSYGPCQFPTLGFIVERYWEIQSHEAEE 542
           DLRIGASFTRFQTML++D+FV+D A D RNLVLSYGPCQFPTLGFIVERYWEIQSHE EE
Sbjct: 180 DLRIGASFTRFQTMLLRDAFVIDSATDDRNLVLSYGPCQFPTLGFIVERYWEIQSHEPEE 239

Query: 543 FWTINCSHTSDEGTANFNWMRVHLFDYTSA 632
           FWTINCSH SDEGTA F WMR HLFD+  A
Sbjct: 240 FWTINCSHRSDEGTATFGWMRGHLFDHACA 269


>gb|EOX92638.1| Topoisomerase 3alpha isoform 2, partial [Theobroma cacao]
          Length = 845

 Score =  368 bits (945), Expect = e-100
 Identities = 171/210 (81%), Positives = 187/210 (89%)
 Frame = +3

Query: 3   GHLMELEFEDRFRKWHSCDPVDLYNAPVRKFVPEDKLDIKKTLEEEARKCQWLVLWLDCD 182
           GHLMELEFEDRFRKWHSCDP DLY+APVRK VPEDK+DIK+TLEEEAR+CQWLVLWLDCD
Sbjct: 63  GHLMELEFEDRFRKWHSCDPADLYHAPVRKHVPEDKMDIKRTLEEEARRCQWLVLWLDCD 122

Query: 183 REGENIAFEVIEVCTAANDNLNIWRARFSALIDREIHYSVQNLARPNKLFSDAVDARQEI 362
           REGENIAFEVI+VC A N +L I RARFSALI+REIH++ QNL  PN  FSDAVDARQEI
Sbjct: 123 REGENIAFEVIDVCRAVNCHLTIRRARFSALIEREIHHATQNLVDPNPWFSDAVDARQEI 182

Query: 363 DLRIGASFTRFQTMLIKDSFVLDFAGDGRNLVLSYGPCQFPTLGFIVERYWEIQSHEAEE 542
           DLRIGASFTRFQTM+++D FV+D A D RNLVLSYGPCQFPTLGF+VERYWE+QSHE EE
Sbjct: 183 DLRIGASFTRFQTMMLRDKFVIDSATDDRNLVLSYGPCQFPTLGFVVERYWEVQSHEPEE 242

Query: 543 FWTINCSHTSDEGTANFNWMRVHLFDYTSA 632
           FWTINCSH  DEG A FNWMR HLFD+T A
Sbjct: 243 FWTINCSHKLDEGVATFNWMRGHLFDHTCA 272


>gb|EOX92637.1| Topoisomerase 3alpha isoform 1 [Theobroma cacao]
          Length = 914

 Score =  368 bits (945), Expect = e-100
 Identities = 171/210 (81%), Positives = 187/210 (89%)
 Frame = +3

Query: 3   GHLMELEFEDRFRKWHSCDPVDLYNAPVRKFVPEDKLDIKKTLEEEARKCQWLVLWLDCD 182
           GHLMELEFEDRFRKWHSCDP DLY+APVRK VPEDK+DIK+TLEEEAR+CQWLVLWLDCD
Sbjct: 63  GHLMELEFEDRFRKWHSCDPADLYHAPVRKHVPEDKMDIKRTLEEEARRCQWLVLWLDCD 122

Query: 183 REGENIAFEVIEVCTAANDNLNIWRARFSALIDREIHYSVQNLARPNKLFSDAVDARQEI 362
           REGENIAFEVI+VC A N +L I RARFSALI+REIH++ QNL  PN  FSDAVDARQEI
Sbjct: 123 REGENIAFEVIDVCRAVNCHLTIRRARFSALIEREIHHATQNLVDPNPWFSDAVDARQEI 182

Query: 363 DLRIGASFTRFQTMLIKDSFVLDFAGDGRNLVLSYGPCQFPTLGFIVERYWEIQSHEAEE 542
           DLRIGASFTRFQTM+++D FV+D A D RNLVLSYGPCQFPTLGF+VERYWE+QSHE EE
Sbjct: 183 DLRIGASFTRFQTMMLRDKFVIDSATDDRNLVLSYGPCQFPTLGFVVERYWEVQSHEPEE 242

Query: 543 FWTINCSHTSDEGTANFNWMRVHLFDYTSA 632
           FWTINCSH  DEG A FNWMR HLFD+T A
Sbjct: 243 FWTINCSHKLDEGVATFNWMRGHLFDHTCA 272


>ref|XP_003602653.1| DNA topoisomerase [Medicago truncatula] gi|355491701|gb|AES72904.1|
           DNA topoisomerase [Medicago truncatula]
          Length = 587

 Score =  368 bits (944), Expect = e-100
 Identities = 170/210 (80%), Positives = 186/210 (88%)
 Frame = +3

Query: 3   GHLMELEFEDRFRKWHSCDPVDLYNAPVRKFVPEDKLDIKKTLEEEARKCQWLVLWLDCD 182
           GHLMEL+F+DR+RKWHSCDP DL+ APV KFVPEDK DIK+TLEEEAR+CQWL+LWLDCD
Sbjct: 64  GHLMELDFDDRYRKWHSCDPADLFQAPVHKFVPEDKKDIKRTLEEEARRCQWLILWLDCD 123

Query: 183 REGENIAFEVIEVCTAANDNLNIWRARFSALIDREIHYSVQNLARPNKLFSDAVDARQEI 362
           REGENIAFEVI VCTAAN NL I RARFSALIDREIH +VQNL  PNK F+DAVDARQEI
Sbjct: 124 REGENIAFEVINVCTAANPNLTIKRARFSALIDREIHQAVQNLVEPNKWFADAVDARQEI 183

Query: 363 DLRIGASFTRFQTMLIKDSFVLDFAGDGRNLVLSYGPCQFPTLGFIVERYWEIQSHEAEE 542
           DLRIGA+FTRFQTML+KD+FV+D   DGRN VLSYGPCQFPTLGF+VERYWEIQ+HE EE
Sbjct: 184 DLRIGATFTRFQTMLMKDAFVIDTVTDGRNTVLSYGPCQFPTLGFVVERYWEIQAHEPEE 243

Query: 543 FWTINCSHTSDEGTANFNWMRVHLFDYTSA 632
           FW I CSH SDEG ANF+W R HLFDYT A
Sbjct: 244 FWLIKCSHRSDEGVANFSWERGHLFDYTCA 273