BLASTX nr result

ID: Zingiber23_contig00046699 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00046699
         (417 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006385188.1| auxin response factor 1 family protein [Popu...    59   5e-07
ref|XP_002331079.1| predicted protein [Populus trichocarpa]            59   5e-07
emb|CBA11999.1| putative auxin response factor 1 [Illicium parvi...    58   1e-06
ref|XP_006392241.1| hypothetical protein EUTSA_v10023326mg [Eutr...    57   3e-06
gb|AFD01315.1| auxin response factor 18-1 [Brassica rapa subsp. ...    56   4e-06
gb|EPS68815.1| auxin response factor 1 [Genlisea aurea]                55   7e-06

>ref|XP_006385188.1| auxin response factor 1 family protein [Populus trichocarpa]
           gi|550342079|gb|ERP62985.1| auxin response factor 1
           family protein [Populus trichocarpa]
          Length = 660

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 25/35 (71%), Positives = 27/35 (77%)
 Frame = -3

Query: 106 HDSGCFQDVMYTELWKACAGPMVTLPCVGERVYYF 2
           H  GC  D +Y ELW ACAGP+VTLPC GERVYYF
Sbjct: 10  HPGGC-NDALYKELWHACAGPLVTLPCEGERVYYF 43


>ref|XP_002331079.1| predicted protein [Populus trichocarpa]
          Length = 660

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 25/35 (71%), Positives = 27/35 (77%)
 Frame = -3

Query: 106 HDSGCFQDVMYTELWKACAGPMVTLPCVGERVYYF 2
           H  GC  D +Y ELW ACAGP+VTLPC GERVYYF
Sbjct: 10  HPGGC-NDALYKELWHACAGPLVTLPCEGERVYYF 43


>emb|CBA11999.1| putative auxin response factor 1 [Illicium parviflorum]
          Length = 684

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 25/47 (53%), Positives = 34/47 (72%)
 Frame = -3

Query: 142 MSLMPPSRSTSSHDSGCFQDVMYTELWKACAGPMVTLPCVGERVYYF 2
           M+L P + S+ +  S  ++D +Y ELW ACAGP+VT+P  GERVYYF
Sbjct: 1   MALAPSTPSSGALGSVAYKDALYQELWHACAGPLVTVPREGERVYYF 47


>ref|XP_006392241.1| hypothetical protein EUTSA_v10023326mg [Eutrema salsugineum]
           gi|567129362|ref|XP_006392242.1| hypothetical protein
           EUTSA_v10023326mg [Eutrema salsugineum]
           gi|557088747|gb|ESQ29527.1| hypothetical protein
           EUTSA_v10023326mg [Eutrema salsugineum]
           gi|557088748|gb|ESQ29528.1| hypothetical protein
           EUTSA_v10023326mg [Eutrema salsugineum]
          Length = 667

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/46 (56%), Positives = 29/46 (63%)
 Frame = -3

Query: 139 SLMPPSRSTSSHDSGCFQDVMYTELWKACAGPMVTLPCVGERVYYF 2
           S M  S  +S    G   D +Y ELW ACAGP+VTLP  GERVYYF
Sbjct: 3   SQMAASNHSSGKPGGVLSDALYRELWHACAGPLVTLPREGERVYYF 48


>gb|AFD01315.1| auxin response factor 18-1 [Brassica rapa subsp. pekinensis]
          Length = 1055

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/39 (66%), Positives = 31/39 (79%)
 Frame = -3

Query: 118 STSSHDSGCFQDVMYTELWKACAGPMVTLPCVGERVYYF 2
           S SS  S  +QD +YTELWKACAGP+V +P VGERV+YF
Sbjct: 9   SRSSFPSS-YQDQLYTELWKACAGPLVEVPLVGERVFYF 46


>gb|EPS68815.1| auxin response factor 1 [Genlisea aurea]
          Length = 428

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 24/47 (51%), Positives = 31/47 (65%)
 Frame = -3

Query: 142 MSLMPPSRSTSSHDSGCFQDVMYTELWKACAGPMVTLPCVGERVYYF 2
           M+L+P S       +G   D +Y ELW ACAGP+V++P  GERVYYF
Sbjct: 1   MALIPTSSLCGGRQTGPANDALYRELWHACAGPLVSVPHEGERVYYF 47


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