BLASTX nr result
ID: Zingiber23_contig00046531
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00046531
(233 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003571303.1| PREDICTED: probable pre-mRNA-splicing factor... 80 3e-13
ref|XP_006648562.1| PREDICTED: probable pre-mRNA-splicing factor... 79 6e-13
dbj|BAD23339.1| putative RNA helicase [Oryza sativa Japonica Group] 79 6e-13
gb|EEE56791.1| hypothetical protein OsJ_06373 [Oryza sativa Japo... 79 6e-13
gb|EAY85485.1| hypothetical protein OsI_06862 [Oryza sativa Indi... 79 6e-13
ref|NP_001046623.1| Os02g0301500 [Oryza sativa Japonica Group] g... 79 6e-13
ref|XP_006374312.1| ATP-dependent RNA helicase family protein [P... 78 1e-12
ref|XP_004498154.1| PREDICTED: probable pre-mRNA-splicing factor... 78 1e-12
ref|XP_006290254.1| hypothetical protein CARUB_v10016599mg [Caps... 78 1e-12
ref|XP_004156439.1| PREDICTED: probable pre-mRNA-splicing factor... 78 1e-12
ref|XP_004139208.1| PREDICTED: uncharacterized protein LOC101216... 78 1e-12
ref|NP_189288.1| probable pre-mRNA-splicing factor ATP-dependent... 78 1e-12
ref|XP_002876982.1| hypothetical protein ARALYDRAFT_347015 [Arab... 78 1e-12
ref|XP_002331832.1| predicted protein [Populus trichocarpa] 78 1e-12
dbj|BAE99056.1| putative ATP-dependent RNA helicase [Arabidopsis... 78 1e-12
dbj|BAD94695.1| ATP-dependent RNA helicase [Arabidopsis thaliana] 78 1e-12
emb|CAA66825.1| RNA helicase [Arabidopsis thaliana] gi|1495271|e... 78 1e-12
ref|XP_004952308.1| PREDICTED: probable pre-mRNA-splicing factor... 78 1e-12
gb|EMT13929.1| Putative pre-mRNA-splicing factor ATP-dependent R... 78 1e-12
gb|AFW70820.1| putative RNA helicase family protein [Zea mays] 78 1e-12
>ref|XP_003571303.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like [Brachypodium distachyon]
Length = 1249
Score = 80.1 bits (196), Expect = 3e-13
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = -2
Query: 232 LAPRFYKTSDPTKMSKRKRQERIEPLYDRYHEPNSW 125
LAPRFYK+SDPTKMSKRKRQERIEPLYDRYHEPNSW
Sbjct: 1207 LAPRFYKSSDPTKMSKRKRQERIEPLYDRYHEPNSW 1242
>ref|XP_006648562.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like [Oryza brachyantha]
Length = 1187
Score = 79.0 bits (193), Expect = 6e-13
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = -2
Query: 232 LAPRFYKTSDPTKMSKRKRQERIEPLYDRYHEPNSW 125
LAPRFYK++DPTKMSKRKRQERIEPLYDRYHEPNSW
Sbjct: 1145 LAPRFYKSADPTKMSKRKRQERIEPLYDRYHEPNSW 1180
>dbj|BAD23339.1| putative RNA helicase [Oryza sativa Japonica Group]
Length = 1240
Score = 79.0 bits (193), Expect = 6e-13
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = -2
Query: 232 LAPRFYKTSDPTKMSKRKRQERIEPLYDRYHEPNSW 125
LAPRFYK++DPTKMSKRKRQERIEPLYDRYHEPNSW
Sbjct: 1198 LAPRFYKSADPTKMSKRKRQERIEPLYDRYHEPNSW 1233
>gb|EEE56791.1| hypothetical protein OsJ_06373 [Oryza sativa Japonica Group]
Length = 133
Score = 79.0 bits (193), Expect = 6e-13
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = -2
Query: 232 LAPRFYKTSDPTKMSKRKRQERIEPLYDRYHEPNSW 125
LAPRFYK++DPTKMSKRKRQERIEPLYDRYHEPNSW
Sbjct: 91 LAPRFYKSADPTKMSKRKRQERIEPLYDRYHEPNSW 126
>gb|EAY85485.1| hypothetical protein OsI_06862 [Oryza sativa Indica Group]
Length = 1240
Score = 79.0 bits (193), Expect = 6e-13
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = -2
Query: 232 LAPRFYKTSDPTKMSKRKRQERIEPLYDRYHEPNSW 125
LAPRFYK++DPTKMSKRKRQERIEPLYDRYHEPNSW
Sbjct: 1198 LAPRFYKSADPTKMSKRKRQERIEPLYDRYHEPNSW 1233
>ref|NP_001046623.1| Os02g0301500 [Oryza sativa Japonica Group]
gi|113536154|dbj|BAF08537.1| Os02g0301500, partial
[Oryza sativa Japonica Group]
Length = 546
Score = 79.0 bits (193), Expect = 6e-13
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = -2
Query: 232 LAPRFYKTSDPTKMSKRKRQERIEPLYDRYHEPNSW 125
LAPRFYK++DPTKMSKRKRQERIEPLYDRYHEPNSW
Sbjct: 504 LAPRFYKSADPTKMSKRKRQERIEPLYDRYHEPNSW 539
>ref|XP_006374312.1| ATP-dependent RNA helicase family protein [Populus trichocarpa]
gi|550322071|gb|ERP52109.1| ATP-dependent RNA helicase
family protein [Populus trichocarpa]
Length = 1177
Score = 78.2 bits (191), Expect = 1e-12
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = -2
Query: 232 LAPRFYKTSDPTKMSKRKRQERIEPLYDRYHEPNSW 125
LAPRF+K SDPTKMSKRKRQERIEPLYDRYHEPNSW
Sbjct: 1135 LAPRFFKVSDPTKMSKRKRQERIEPLYDRYHEPNSW 1170
>ref|XP_004498154.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like isoform X1 [Cicer arietinum]
gi|502123536|ref|XP_004498155.1| PREDICTED: probable
pre-mRNA-splicing factor ATP-dependent RNA helicase-like
isoform X2 [Cicer arietinum]
gi|502123538|ref|XP_004498156.1| PREDICTED: probable
pre-mRNA-splicing factor ATP-dependent RNA helicase-like
isoform X3 [Cicer arietinum]
gi|502123540|ref|XP_004498157.1| PREDICTED: probable
pre-mRNA-splicing factor ATP-dependent RNA helicase-like
isoform X4 [Cicer arietinum]
gi|502123542|ref|XP_004498158.1| PREDICTED: probable
pre-mRNA-splicing factor ATP-dependent RNA helicase-like
isoform X5 [Cicer arietinum]
gi|502123544|ref|XP_004498159.1| PREDICTED: probable
pre-mRNA-splicing factor ATP-dependent RNA helicase-like
isoform X6 [Cicer arietinum]
gi|502123546|ref|XP_004498160.1| PREDICTED: probable
pre-mRNA-splicing factor ATP-dependent RNA helicase-like
isoform X7 [Cicer arietinum]
gi|502123548|ref|XP_004498161.1| PREDICTED: probable
pre-mRNA-splicing factor ATP-dependent RNA helicase-like
isoform X8 [Cicer arietinum]
Length = 1178
Score = 78.2 bits (191), Expect = 1e-12
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = -2
Query: 232 LAPRFYKTSDPTKMSKRKRQERIEPLYDRYHEPNSW 125
LAPRF+K SDPTKMSKRKRQERIEPLYDRYHEPNSW
Sbjct: 1136 LAPRFFKVSDPTKMSKRKRQERIEPLYDRYHEPNSW 1171
>ref|XP_006290254.1| hypothetical protein CARUB_v10016599mg [Capsella rubella]
gi|482558961|gb|EOA23152.1| hypothetical protein
CARUB_v10016599mg [Capsella rubella]
Length = 1174
Score = 78.2 bits (191), Expect = 1e-12
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = -2
Query: 232 LAPRFYKTSDPTKMSKRKRQERIEPLYDRYHEPNSW 125
LAPRF+K SDPTKMSKRKRQERIEPLYDRYHEPNSW
Sbjct: 1132 LAPRFFKVSDPTKMSKRKRQERIEPLYDRYHEPNSW 1167
>ref|XP_004156439.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like [Cucumis sativus]
Length = 1181
Score = 78.2 bits (191), Expect = 1e-12
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = -2
Query: 232 LAPRFYKTSDPTKMSKRKRQERIEPLYDRYHEPNSW 125
LAPRF+K SDPTKMSKRKRQERIEPLYDRYHEPNSW
Sbjct: 1139 LAPRFFKVSDPTKMSKRKRQERIEPLYDRYHEPNSW 1174
>ref|XP_004139208.1| PREDICTED: uncharacterized protein LOC101216792 [Cucumis sativus]
Length = 1218
Score = 78.2 bits (191), Expect = 1e-12
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = -2
Query: 232 LAPRFYKTSDPTKMSKRKRQERIEPLYDRYHEPNSW 125
LAPRF+K SDPTKMSKRKRQERIEPLYDRYHEPNSW
Sbjct: 1176 LAPRFFKVSDPTKMSKRKRQERIEPLYDRYHEPNSW 1211
>ref|NP_189288.1| probable pre-mRNA-splicing factor ATP-dependent RNA helicase
[Arabidopsis thaliana] gi|27735187|sp|Q38953.2|DHX8_ARATH
RecName: Full=Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase gi|9293935|dbj|BAB01838.1|
pre-mRNA splicing factor ATP-dependent RNA helicase-like
protein [Arabidopsis thaliana]
gi|332643657|gb|AEE77178.1| probable pre-mRNA-splicing
factor ATP-dependent RNA helicase [Arabidopsis thaliana]
Length = 1168
Score = 78.2 bits (191), Expect = 1e-12
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = -2
Query: 232 LAPRFYKTSDPTKMSKRKRQERIEPLYDRYHEPNSW 125
LAPRF+K SDPTKMSKRKRQERIEPLYDRYHEPNSW
Sbjct: 1126 LAPRFFKVSDPTKMSKRKRQERIEPLYDRYHEPNSW 1161
>ref|XP_002876982.1| hypothetical protein ARALYDRAFT_347015 [Arabidopsis lyrata subsp.
lyrata] gi|297322820|gb|EFH53241.1| hypothetical protein
ARALYDRAFT_347015 [Arabidopsis lyrata subsp. lyrata]
Length = 275
Score = 78.2 bits (191), Expect = 1e-12
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = -2
Query: 232 LAPRFYKTSDPTKMSKRKRQERIEPLYDRYHEPNSW 125
LAPRF+K SDPTKMSKRKRQERIEPLYDRYHEPNSW
Sbjct: 233 LAPRFFKVSDPTKMSKRKRQERIEPLYDRYHEPNSW 268
>ref|XP_002331832.1| predicted protein [Populus trichocarpa]
Length = 1171
Score = 78.2 bits (191), Expect = 1e-12
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = -2
Query: 232 LAPRFYKTSDPTKMSKRKRQERIEPLYDRYHEPNSW 125
LAPRF+K SDPTKMSKRKRQERIEPLYDRYHEPNSW
Sbjct: 1129 LAPRFFKVSDPTKMSKRKRQERIEPLYDRYHEPNSW 1164
>dbj|BAE99056.1| putative ATP-dependent RNA helicase [Arabidopsis thaliana]
Length = 603
Score = 78.2 bits (191), Expect = 1e-12
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = -2
Query: 232 LAPRFYKTSDPTKMSKRKRQERIEPLYDRYHEPNSW 125
LAPRF+K SDPTKMSKRKRQERIEPLYDRYHEPNSW
Sbjct: 561 LAPRFFKVSDPTKMSKRKRQERIEPLYDRYHEPNSW 596
>dbj|BAD94695.1| ATP-dependent RNA helicase [Arabidopsis thaliana]
Length = 273
Score = 78.2 bits (191), Expect = 1e-12
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = -2
Query: 232 LAPRFYKTSDPTKMSKRKRQERIEPLYDRYHEPNSW 125
LAPRF+K SDPTKMSKRKRQERIEPLYDRYHEPNSW
Sbjct: 231 LAPRFFKVSDPTKMSKRKRQERIEPLYDRYHEPNSW 266
>emb|CAA66825.1| RNA helicase [Arabidopsis thaliana] gi|1495271|emb|CAA66613.1| RNA
helicase [Arabidopsis thaliana]
Length = 1121
Score = 78.2 bits (191), Expect = 1e-12
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = -2
Query: 232 LAPRFYKTSDPTKMSKRKRQERIEPLYDRYHEPNSW 125
LAPRF+K SDPTKMSKRKRQERIEPLYDRYHEPNSW
Sbjct: 1079 LAPRFFKVSDPTKMSKRKRQERIEPLYDRYHEPNSW 1114
>ref|XP_004952308.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like [Setaria italica]
Length = 1222
Score = 77.8 bits (190), Expect = 1e-12
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = -2
Query: 232 LAPRFYKTSDPTKMSKRKRQERIEPLYDRYHEPNSW 125
LAPRFYK +DPTKMSKRKRQERIEPLYDRYHEPNSW
Sbjct: 1180 LAPRFYKGADPTKMSKRKRQERIEPLYDRYHEPNSW 1215
>gb|EMT13929.1| Putative pre-mRNA-splicing factor ATP-dependent RNA helicase
[Aegilops tauschii]
Length = 1289
Score = 77.8 bits (190), Expect = 1e-12
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = -2
Query: 232 LAPRFYKTSDPTKMSKRKRQERIEPLYDRYHEPNSW 125
LAPRFYK +DPTKMSKRKRQERIEPLYDRYHEPNSW
Sbjct: 1247 LAPRFYKGADPTKMSKRKRQERIEPLYDRYHEPNSW 1282
>gb|AFW70820.1| putative RNA helicase family protein [Zea mays]
Length = 1236
Score = 77.8 bits (190), Expect = 1e-12
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = -2
Query: 232 LAPRFYKTSDPTKMSKRKRQERIEPLYDRYHEPNSW 125
LAPRFYK +DPTKMSKRKRQERIEPLYDRYHEPNSW
Sbjct: 1194 LAPRFYKGADPTKMSKRKRQERIEPLYDRYHEPNSW 1229