BLASTX nr result
ID: Zingiber23_contig00045968
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00045968
(339 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002300637.2| hypothetical protein POPTR_0002s00970g [Popu... 64 3e-08
gb|EMJ11620.1| hypothetical protein PRUPE_ppa000440mg [Prunus pe... 61 2e-07
gb|EOY15301.1| RAD3-like DNA-binding helicase protein, putative ... 58 1e-06
gb|EOY15300.1| RAD3-like DNA-binding helicase protein, putative ... 58 1e-06
gb|EOY15299.1| RAD3-like DNA-binding helicase protein, putative ... 58 1e-06
gb|EOY15298.1| RAD3-like DNA-binding helicase protein, putative ... 58 1e-06
ref|XP_004512601.1| PREDICTED: Fanconi anemia group J protein ho... 58 1e-06
ref|XP_004301629.1| PREDICTED: Fanconi anemia group J protein ho... 58 1e-06
>ref|XP_002300637.2| hypothetical protein POPTR_0002s00970g [Populus trichocarpa]
gi|550344019|gb|EEE79910.2| hypothetical protein
POPTR_0002s00970g [Populus trichocarpa]
Length = 1183
Score = 63.5 bits (153), Expect = 3e-08
Identities = 47/130 (36%), Positives = 63/130 (48%), Gaps = 19/130 (14%)
Frame = +1
Query: 7 SLNMSVNSYNHKRKR------INLQ-----MSVCNQIDCLSSDTDSFYPVDSISSISRET 153
SLN+SVNS+ KR++ INLQ S C+S S D+ +R
Sbjct: 956 SLNLSVNSHTQKRRKSMDLSLINLQGEQSDTSYAETPGCVSFTRSSVTSGDT----NRRI 1011
Query: 154 DLIPESPCLDNSSVNRQRKLIGNVVDT--------LTKMLEVSCLYCRSPLGLQENDLLV 309
+ E+ C + S L+ N T + K L++SC C+SPLG EN+L V
Sbjct: 1012 EFGLETNCRERQSTKHASPLLPNSCGTSCASSDSLMDKRLQISCSLCKSPLGRPENNLYV 1071
Query: 310 NCSLTSSSKV 339
CSLTSSSKV
Sbjct: 1072 ECSLTSSSKV 1081
>gb|EMJ11620.1| hypothetical protein PRUPE_ppa000440mg [Prunus persica]
Length = 1183
Score = 60.8 bits (146), Expect = 2e-07
Identities = 41/126 (32%), Positives = 64/126 (50%), Gaps = 16/126 (12%)
Frame = +1
Query: 7 SLNMSVNSYNHKRKR------INLQMSVCNQIDCLSSDTDSFYPVDSISSISRETDLIPE 168
SL++SVNS+ KR++ N C+ D S D+ S + +R+ + E
Sbjct: 967 SLSLSVNSHTQKRRKSVYSPLANFVYGQCDASDSRSPDSTSSVRSMATIDTNRQIEFSVE 1026
Query: 169 SPC----------LDNSSVNRQRKLIGNVVDTLTKMLEVSCLYCRSPLGLQENDLLVNCS 318
+ C L S++ +G V+D K L++SCL C++PLGL EN L ++CS
Sbjct: 1027 TNCSGHKSNVPHVLTTSNLVASSMSVGCVMD---KRLQISCLLCKTPLGLPENHLYLSCS 1083
Query: 319 LTSSSK 336
+T SSK
Sbjct: 1084 ITLSSK 1089
>gb|EOY15301.1| RAD3-like DNA-binding helicase protein, putative isoform 4 [Theobroma
cacao]
Length = 1212
Score = 58.2 bits (139), Expect = 1e-06
Identities = 45/124 (36%), Positives = 63/124 (50%), Gaps = 15/124 (12%)
Frame = +1
Query: 13 NMSVNSYNHKRKRINLQMSVCNQIDCLSSDTDSFYPVDSISSISRETDLIPE-------- 168
N+SV SY HKR+ ++ N ++ SDT + P S+S + +L+
Sbjct: 940 NLSVCSYIHKRRE-SMGSPFINLVNEEGSDTPAQIP----GSMSFKDNLLANRRRIEFGF 994
Query: 169 SPCLDNSSVNRQRK-------LIGNVVDTLTKMLEVSCLYCRSPLGLQENDLLVNCSLTS 327
PC S N+Q+K N + K L++SCL CRSPLG EN L ++CSLT
Sbjct: 995 EPC---SVENKQKKSNVPQSLATHNSCPAMDKRLQISCLLCRSPLGRPENHLYLSCSLTV 1051
Query: 328 SSKV 339
SSKV
Sbjct: 1052 SSKV 1055
>gb|EOY15300.1| RAD3-like DNA-binding helicase protein, putative isoform 3 [Theobroma
cacao]
Length = 1216
Score = 58.2 bits (139), Expect = 1e-06
Identities = 45/124 (36%), Positives = 63/124 (50%), Gaps = 15/124 (12%)
Frame = +1
Query: 13 NMSVNSYNHKRKRINLQMSVCNQIDCLSSDTDSFYPVDSISSISRETDLIPE-------- 168
N+SV SY HKR+ ++ N ++ SDT + P S+S + +L+
Sbjct: 940 NLSVCSYIHKRRE-SMGSPFINLVNEEGSDTPAQIP----GSMSFKDNLLANRRRIEFGF 994
Query: 169 SPCLDNSSVNRQRK-------LIGNVVDTLTKMLEVSCLYCRSPLGLQENDLLVNCSLTS 327
PC S N+Q+K N + K L++SCL CRSPLG EN L ++CSLT
Sbjct: 995 EPC---SVENKQKKSNVPQSLATHNSCPAMDKRLQISCLLCRSPLGRPENHLYLSCSLTV 1051
Query: 328 SSKV 339
SSKV
Sbjct: 1052 SSKV 1055
>gb|EOY15299.1| RAD3-like DNA-binding helicase protein, putative isoform 2 [Theobroma
cacao]
Length = 1222
Score = 58.2 bits (139), Expect = 1e-06
Identities = 45/124 (36%), Positives = 63/124 (50%), Gaps = 15/124 (12%)
Frame = +1
Query: 13 NMSVNSYNHKRKRINLQMSVCNQIDCLSSDTDSFYPVDSISSISRETDLIPE-------- 168
N+SV SY HKR+ ++ N ++ SDT + P S+S + +L+
Sbjct: 946 NLSVCSYIHKRRE-SMGSPFINLVNEEGSDTPAQIP----GSMSFKDNLLANRRRIEFGF 1000
Query: 169 SPCLDNSSVNRQRK-------LIGNVVDTLTKMLEVSCLYCRSPLGLQENDLLVNCSLTS 327
PC S N+Q+K N + K L++SCL CRSPLG EN L ++CSLT
Sbjct: 1001 EPC---SVENKQKKSNVPQSLATHNSCPAMDKRLQISCLLCRSPLGRPENHLYLSCSLTV 1057
Query: 328 SSKV 339
SSKV
Sbjct: 1058 SSKV 1061
>gb|EOY15298.1| RAD3-like DNA-binding helicase protein, putative isoform 1 [Theobroma
cacao]
Length = 1110
Score = 58.2 bits (139), Expect = 1e-06
Identities = 45/124 (36%), Positives = 63/124 (50%), Gaps = 15/124 (12%)
Frame = +1
Query: 13 NMSVNSYNHKRKRINLQMSVCNQIDCLSSDTDSFYPVDSISSISRETDLIPE-------- 168
N+SV SY HKR+ ++ N ++ SDT + P S+S + +L+
Sbjct: 940 NLSVCSYIHKRRE-SMGSPFINLVNEEGSDTPAQIP----GSMSFKDNLLANRRRIEFGF 994
Query: 169 SPCLDNSSVNRQRK-------LIGNVVDTLTKMLEVSCLYCRSPLGLQENDLLVNCSLTS 327
PC S N+Q+K N + K L++SCL CRSPLG EN L ++CSLT
Sbjct: 995 EPC---SVENKQKKSNVPQSLATHNSCPAMDKRLQISCLLCRSPLGRPENHLYLSCSLTV 1051
Query: 328 SSKV 339
SSKV
Sbjct: 1052 SSKV 1055
>ref|XP_004512601.1| PREDICTED: Fanconi anemia group J protein homolog isoform X1 [Cicer
arietinum] gi|502162743|ref|XP_004512602.1| PREDICTED:
Fanconi anemia group J protein homolog isoform X2 [Cicer
arietinum] gi|502162746|ref|XP_004512603.1| PREDICTED:
Fanconi anemia group J protein homolog isoform X3 [Cicer
arietinum]
Length = 1261
Score = 58.2 bits (139), Expect = 1e-06
Identities = 45/124 (36%), Positives = 62/124 (50%), Gaps = 13/124 (10%)
Frame = +1
Query: 7 SLNMSVNSYNHKRKR------INL-QMSVCNQIDCLSSDTDSFYPVDSISSISRETD--- 156
SLN+SVNS+N KR++ INL + N C+S+ T + + T+
Sbjct: 977 SLNLSVNSHNQKRRKPMVIPFINLIEEEENNDASCVSTPTWCTKSSVEVREATHGTECGL 1036
Query: 157 ---LIPESPCLDNSSVNRQRKLIGNVVDTLTKMLEVSCLYCRSPLGLQENDLLVNCSLTS 327
L +SP L SS+ L V K L++ C C++PLGL EN L + CSL S
Sbjct: 1037 GRTLNSQSPWLPTSSLPGSCSL---TVPVQNKRLQLFCSRCKNPLGLHENRLYLTCSLIS 1093
Query: 328 SSKV 339
SSKV
Sbjct: 1094 SSKV 1097
>ref|XP_004301629.1| PREDICTED: Fanconi anemia group J protein homolog [Fragaria vesca
subsp. vesca]
Length = 1292
Score = 58.2 bits (139), Expect = 1e-06
Identities = 45/130 (34%), Positives = 61/130 (46%), Gaps = 19/130 (14%)
Frame = +1
Query: 7 SLNMSVNSYNHKRKRINLQMSVCNQI-------------DCLSSDTDSFYPVDSISSISR 147
SL+MSVNS+ KR++ ++ S+ N DC S D+ D+I I
Sbjct: 981 SLDMSVNSHTQKRRK-SMHSSLVNSSQGQSDGASDSKTPDCPGSIKDTLTNRDAIRKIEF 1039
Query: 148 ETDLIPESPCLDN------SSVNRQRKLIGNVVDTLTKMLEVSCLYCRSPLGLQENDLLV 309
+ C SS G V+D K LE+ C C+SPLGL EN+L V
Sbjct: 1040 SETNYSDHYCKSKVHHPLPSSCGALSMSAGTVMD---KRLEICCSLCKSPLGLPENNLHV 1096
Query: 310 NCSLTSSSKV 339
CS+TSSSK+
Sbjct: 1097 TCSITSSSKL 1106