BLASTX nr result
ID: Zingiber23_contig00045880
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00045880
(305 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002281024.2| PREDICTED: RING-H2 finger protein ATL16-like... 68 1e-09
emb|CAN69298.1| hypothetical protein VITISV_043412 [Vitis vinifera] 68 1e-09
ref|XP_002314635.2| zinc finger family protein [Populus trichoca... 67 3e-09
emb|CBI23610.3| unnamed protein product [Vitis vinifera] 64 2e-08
ref|XP_004134414.1| PREDICTED: RING-H2 finger protein ATL16-like... 64 2e-08
ref|XP_006354502.1| PREDICTED: RING-H2 finger protein ATL16-like... 62 8e-08
ref|XP_006282187.1| hypothetical protein CARUB_v10028453mg [Caps... 62 8e-08
ref|XP_006420199.1| hypothetical protein CICLE_v10005261mg [Citr... 62 1e-07
ref|XP_006489746.1| PREDICTED: RING-H2 finger protein ATL16-like... 60 2e-07
gb|EOY06016.1| RING/U-box superfamily protein [Theobroma cacao] 60 2e-07
ref|XP_004495316.1| PREDICTED: RING-H2 finger protein ATL16-like... 60 2e-07
gb|ESW16088.1| hypothetical protein PHAVU_007G128200g [Phaseolus... 60 3e-07
ref|XP_004296360.1| PREDICTED: RING-H2 finger protein ATL16-like... 60 3e-07
ref|XP_002263905.1| PREDICTED: RING-H2 finger protein ATL1-like ... 60 3e-07
ref|XP_006577702.1| PREDICTED: RING-H2 finger protein ATL1-like ... 60 4e-07
gb|EXC31939.1| RING-H2 finger protein ATL16 [Morus notabilis] 59 7e-07
ref|XP_004247719.1| PREDICTED: RING-H2 finger protein ATL1-like ... 59 7e-07
ref|XP_003555510.1| PREDICTED: RING-H2 finger protein ATL16-like... 59 7e-07
ref|XP_002529293.1| ring finger protein, putative [Ricinus commu... 59 9e-07
ref|NP_199155.1| RING-H2 finger protein [Arabidopsis thaliana] g... 58 1e-06
>ref|XP_002281024.2| PREDICTED: RING-H2 finger protein ATL16-like [Vitis vinifera]
Length = 359
Score = 67.8 bits (164), Expect = 1e-09
Identities = 42/85 (49%), Positives = 55/85 (64%), Gaps = 10/85 (11%)
Frame = +2
Query: 71 STNPSPRRI------KKWRKGQKVGSMGDEFVGDRCRCEQ----PMRRSFSMDSCNDSQL 220
S +PSPR++ KK RK V SMGDE + R + +Q P+RRSFSMDS ND QL
Sbjct: 249 SISPSPRKLEQRIVPKKARKFHHVASMGDECIDTRGKDDQFSIQPIRRSFSMDSSNDRQL 308
Query: 221 YLSIQEILRQSRRGSNQASGTGETS 295
YL+IQEIL+Q+R S+ + G +S
Sbjct: 309 YLAIQEILQQNRPVSDFSPSEGCSS 333
>emb|CAN69298.1| hypothetical protein VITISV_043412 [Vitis vinifera]
Length = 419
Score = 67.8 bits (164), Expect = 1e-09
Identities = 42/85 (49%), Positives = 55/85 (64%), Gaps = 10/85 (11%)
Frame = +2
Query: 71 STNPSPRRI------KKWRKGQKVGSMGDEFVGDRCRCEQ----PMRRSFSMDSCNDSQL 220
S +PSPR++ KK RK V SMGDE + R + +Q P+RRSFSMDS ND QL
Sbjct: 309 SISPSPRKLEQRIVPKKARKFHHVASMGDECIDTRGKDDQFSIQPIRRSFSMDSSNDRQL 368
Query: 221 YLSIQEILRQSRRGSNQASGTGETS 295
YL+IQEIL+Q+R S+ + G +S
Sbjct: 369 YLAIQEILQQNRPVSDFSPSEGCSS 393
>ref|XP_002314635.2| zinc finger family protein [Populus trichocarpa]
gi|550329366|gb|EEF00806.2| zinc finger family protein
[Populus trichocarpa]
Length = 355
Score = 66.6 bits (161), Expect = 3e-09
Identities = 45/90 (50%), Positives = 57/90 (63%), Gaps = 13/90 (14%)
Frame = +2
Query: 56 TGETS--STNPSPRRI------KKWRKGQKVGSMGDEFVGDRCRCEQ-----PMRRSFSM 196
+GE S S +PSPR+I KK R KV SMGDE + R + +Q P+RRSFSM
Sbjct: 237 SGELSARSISPSPRKIEQGVGHKKARNLNKVTSMGDECIDTRGKDDQFGLIQPIRRSFSM 296
Query: 197 DSCNDSQLYLSIQEILRQSRRGSNQASGTG 286
DS D QLYLSIQEI++QSR+ + +S G
Sbjct: 297 DSSADRQLYLSIQEIVQQSRQVTEVSSVEG 326
>emb|CBI23610.3| unnamed protein product [Vitis vinifera]
Length = 194
Score = 64.3 bits (155), Expect = 2e-08
Identities = 40/81 (49%), Positives = 54/81 (66%), Gaps = 5/81 (6%)
Frame = +2
Query: 68 SSTNPSPRRI-KKWRKGQKVGSMGDEFVGDRCRCEQ----PMRRSFSMDSCNDSQLYLSI 232
+S + +PR + KK RK V SMGDE + R + +Q P+RRSFSMDS ND QLYL+I
Sbjct: 88 TSISTTPRIVPKKARKFHHVASMGDECIDTRGKDDQFSIQPIRRSFSMDSSNDRQLYLAI 147
Query: 233 QEILRQSRRGSNQASGTGETS 295
QEIL+Q+R S+ + G +S
Sbjct: 148 QEILQQNRPVSDFSPSEGCSS 168
>ref|XP_004134414.1| PREDICTED: RING-H2 finger protein ATL16-like [Cucumis sativus]
gi|449525934|ref|XP_004169971.1| PREDICTED: LOW QUALITY
PROTEIN: RING-H2 finger protein ATL16-like [Cucumis
sativus]
Length = 322
Score = 63.9 bits (154), Expect = 2e-08
Identities = 38/97 (39%), Positives = 58/97 (59%), Gaps = 8/97 (8%)
Frame = +2
Query: 14 GGSSNGPTEPSSEVTGETSSTNPSP----RRIKKWRKGQKVGSMGDEFVGDRCR----CE 169
GG N PS + + E +++ P + KKW+K QKV S+GDE++ R + C
Sbjct: 194 GGIRN---HPSGQFSQERANSRELPAVKLEQGKKWQKLQKVTSLGDEWIDTREKDEQFCI 250
Query: 170 QPMRRSFSMDSCNDSQLYLSIQEILRQSRRGSNQASG 280
QP+RRS SMDS + Q+Y+++Q L+QSR G+ + G
Sbjct: 251 QPIRRSVSMDSSAERQMYVAVQAALQQSRHGNEVSPG 287
>ref|XP_006354502.1| PREDICTED: RING-H2 finger protein ATL16-like [Solanum tuberosum]
Length = 349
Score = 62.0 bits (149), Expect = 8e-08
Identities = 40/97 (41%), Positives = 57/97 (58%), Gaps = 12/97 (12%)
Frame = +2
Query: 44 SSEVTGETSSTNPSPRRI-------KKWRKGQKVGSMGDEFVGDRCRCE-----QPMRRS 187
+ E+TG S +PSPR+ +K +K + V SMGDE + R + + QP+RRS
Sbjct: 228 TGEITGHFS-ISPSPRKTEQQKVSSRKCKKFRHVTSMGDECINMRKKNDEFDSIQPIRRS 286
Query: 188 FSMDSCNDSQLYLSIQEILRQSRRGSNQASGTGETSS 298
FSMDS D QLYL++QEI+ Q +R + S +SS
Sbjct: 287 FSMDSATDRQLYLAVQEIIMQQQRQVSDVSPFESSSS 323
>ref|XP_006282187.1| hypothetical protein CARUB_v10028453mg [Capsella rubella]
gi|482550891|gb|EOA15085.1| hypothetical protein
CARUB_v10028453mg [Capsella rubella]
Length = 374
Score = 62.0 bits (149), Expect = 8e-08
Identities = 38/87 (43%), Positives = 53/87 (60%), Gaps = 12/87 (13%)
Frame = +2
Query: 77 NPSPRRI------KKWRKGQKVGSMGDEFVGDRCRCE------QPMRRSFSMDSCNDSQL 220
+PSP+++ +K+RK QK+ SMGDE + R + QP+RRS SMDS D QL
Sbjct: 256 SPSPKKLDRGGLPRKFRKLQKMTSMGDECIDTRRGIDDQFGSIQPIRRSMSMDSSADRQL 315
Query: 221 YLSIQEILRQSRRGSNQASGTGETSSS 301
YLS+QE +R++R G G +SSS
Sbjct: 316 YLSVQEAIRKNREVPVAGDGGGCSSSS 342
>ref|XP_006420199.1| hypothetical protein CICLE_v10005261mg [Citrus clementina]
gi|557522072|gb|ESR33439.1| hypothetical protein
CICLE_v10005261mg [Citrus clementina]
Length = 358
Score = 61.6 bits (148), Expect = 1e-07
Identities = 42/96 (43%), Positives = 59/96 (61%), Gaps = 10/96 (10%)
Frame = +2
Query: 44 SSEVTGETSSTNPSPRRI------KKWRKGQKVGSMGDEFVGDRCRCEQ----PMRRSFS 193
S E++G S +PSPR++ K+ RK KV SMGDE + R + EQ P+RRSFS
Sbjct: 240 SGELSGR--SISPSPRKLEQRFVHKRARKLHKVTSMGDECIDIRGKDEQFAIEPIRRSFS 297
Query: 194 MDSCNDSQLYLSIQEILRQSRRGSNQASGTGETSSS 301
MDS D +LYL+IQE ++Q R+ + + G +S S
Sbjct: 298 MDSSADPKLYLAIQEAVQQKRQVTEASPIEGCSSRS 333
>ref|XP_006489746.1| PREDICTED: RING-H2 finger protein ATL16-like [Citrus sinensis]
Length = 358
Score = 60.5 bits (145), Expect = 2e-07
Identities = 41/96 (42%), Positives = 59/96 (61%), Gaps = 10/96 (10%)
Frame = +2
Query: 44 SSEVTGETSSTNPSPRRI------KKWRKGQKVGSMGDEFVGDRCRCE----QPMRRSFS 193
S E++G S +PSPR++ K+ RK KV SMGDE + R + E +P+RRSFS
Sbjct: 240 SGELSGH--SISPSPRKLDQRFVHKRARKLHKVTSMGDECIDIRGKDEHFAIEPIRRSFS 297
Query: 194 MDSCNDSQLYLSIQEILRQSRRGSNQASGTGETSSS 301
MDS D +LYL+IQE ++Q R+ + + G +S S
Sbjct: 298 MDSSADPKLYLAIQEAVQQKRQVTEASPIEGCSSRS 333
>gb|EOY06016.1| RING/U-box superfamily protein [Theobroma cacao]
Length = 354
Score = 60.5 bits (145), Expect = 2e-07
Identities = 38/77 (49%), Positives = 49/77 (63%), Gaps = 10/77 (12%)
Frame = +2
Query: 65 TSSTNPSPRRI------KKWRKGQKVGSMGDEFVGDRCRCEQ----PMRRSFSMDSCNDS 214
T S +PSPR++ KK RK K SMGDE + R + +Q P+RRS SMDS D
Sbjct: 242 TRSISPSPRKLEQRIVQKKERKFHKGTSMGDECIDIRGKDDQFAIQPIRRSISMDSSADR 301
Query: 215 QLYLSIQEILRQSRRGS 265
QLYL+IQE +RQ+R+ S
Sbjct: 302 QLYLAIQEAIRQNRQVS 318
>ref|XP_004495316.1| PREDICTED: RING-H2 finger protein ATL16-like [Cicer arietinum]
Length = 365
Score = 60.5 bits (145), Expect = 2e-07
Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 12/82 (14%)
Frame = +2
Query: 68 SSTNPSPRRI-------KKWRKGQKVGSMGDEFVGDRCRCE-----QPMRRSFSMDSCND 211
SS +PS R++ KK RK KV S GDE + R + + QP+RRSFSMDS D
Sbjct: 248 SSISPSQRKVLEHRNVEKKARKLNKVTSFGDECIDVRTKKDEQFSVQPIRRSFSMDSSRD 307
Query: 212 SQLYLSIQEILRQSRRGSNQAS 277
Q YL++QE L+Q +R N+ +
Sbjct: 308 RQFYLAVQEALKQQKREVNEVN 329
>gb|ESW16088.1| hypothetical protein PHAVU_007G128200g [Phaseolus vulgaris]
Length = 353
Score = 60.1 bits (144), Expect = 3e-07
Identities = 38/91 (41%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Frame = +2
Query: 41 PSSEVTGETSSTNPSPRRIKKWRKGQKVGSMGDEFVGDRCRCEQ----PMRRSFSMDSCN 208
P+S ++ T KK K KV SMGDE + R + Q P+RRSFSMDS
Sbjct: 234 PTSHISSSTPRKLEHGNVQKKAMKLHKVTSMGDECIDIRAKDNQFSVQPIRRSFSMDSSG 293
Query: 209 DSQLYLSIQEILRQSRRGSNQASGTGETSSS 301
D Q YL++QE LR R N+ S T S S
Sbjct: 294 DRQFYLAVQEALRLQNRQVNEVSSTEGCSGS 324
>ref|XP_004296360.1| PREDICTED: RING-H2 finger protein ATL16-like [Fragaria vesca subsp.
vesca]
Length = 369
Score = 60.1 bits (144), Expect = 3e-07
Identities = 43/98 (43%), Positives = 59/98 (60%), Gaps = 15/98 (15%)
Frame = +2
Query: 56 TGETS--STNPSPRRI--------KKWRK-GQKVGSMGDEFVGDRCRCEQ----PMRRSF 190
+GE S S +PSPR++ KK RK KV SMGDE + R + EQ P+RRSF
Sbjct: 243 SGELSVRSISPSPRKLEQIRTFLPKKARKFNNKVTSMGDECIDIRGKDEQFSIQPIRRSF 302
Query: 191 SMDSCNDSQLYLSIQEILRQSRRGSNQASGTGETSSSA 304
SMDS ND LYL++QE ++Q + S + G +SS++
Sbjct: 303 SMDSSNDRHLYLAVQEAVQQQSQVSEVSPIEGCSSSTS 340
>ref|XP_002263905.1| PREDICTED: RING-H2 finger protein ATL1-like [Vitis vinifera]
Length = 351
Score = 60.1 bits (144), Expect = 3e-07
Identities = 37/86 (43%), Positives = 50/86 (58%), Gaps = 10/86 (11%)
Frame = +2
Query: 71 STNPSPRRI------KKWRKGQKVGSMGDEFVGDRCRCEQ----PMRRSFSMDSCNDSQL 220
S PSP ++ KK RK V SMGDE + R + +Q P+RRSFSMDS D QL
Sbjct: 240 SRGPSPTKLQQKLENKKSRKFHYVSSMGDECIDVREKDDQFLIQPIRRSFSMDSAADPQL 299
Query: 221 YLSIQEILRQSRRGSNQASGTGETSS 298
Y+++QEI+R R ++ S + E S
Sbjct: 300 YMTVQEIIRNKNRPLSEVSTSQECDS 325
>ref|XP_006577702.1| PREDICTED: RING-H2 finger protein ATL1-like [Glycine max]
Length = 141
Score = 59.7 bits (143), Expect = 4e-07
Identities = 33/68 (48%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Frame = +2
Query: 107 RKGQKVGSMGDEFVGDRCRCEQ----PMRRSFSMDSCNDSQLYLSIQEILRQSRRGSNQA 274
RK V MGDE + R + EQ P+RRSFSMDS ND QLYL Q +++Q+ R NQA
Sbjct: 48 RKCHHVSIMGDECIDVRKKDEQFSIQPIRRSFSMDSANDKQLYLDFQTMIQQNNRHQNQA 107
Query: 275 SGTGETSS 298
S + + +S
Sbjct: 108 SASEDCNS 115
>gb|EXC31939.1| RING-H2 finger protein ATL16 [Morus notabilis]
Length = 340
Score = 58.9 bits (141), Expect = 7e-07
Identities = 34/80 (42%), Positives = 51/80 (63%), Gaps = 6/80 (7%)
Frame = +2
Query: 68 SSTNPSPRRIK---KWRKGQKVGSMGDEFVG---DRCRCEQPMRRSFSMDSCNDSQLYLS 229
S T+ SPR+++ + +K V MGDE + D C QP+RRSFS DS D QLY +
Sbjct: 234 SRTDHSPRKMEHKVRVKKCHHVSIMGDECIDVRKDDQFCIQPIRRSFSWDSATDRQLYST 293
Query: 230 IQEILRQSRRGSNQASGTGE 289
++EI++++RR N+ S +GE
Sbjct: 294 VREIIQKNRRPLNEVSTSGE 313
>ref|XP_004247719.1| PREDICTED: RING-H2 finger protein ATL1-like [Solanum lycopersicum]
Length = 349
Score = 58.9 bits (141), Expect = 7e-07
Identities = 36/94 (38%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Frame = +2
Query: 44 SSEVTGETSSTNPSPRRI--KKWRKGQKVGSMGDEFVGDRCRCE-----QPMRRSFSMDS 202
+ E TG S +++ +K K + V SMGDE + R + + QP+RRSFSMDS
Sbjct: 229 TGETTGHFSPRKKEQQKVSSRKCNKFRHVTSMGDECINMRKKDDEFDSIQPIRRSFSMDS 288
Query: 203 CNDSQLYLSIQEILRQSRRGSNQASGTGETSSSA 304
D QLY+++QEI+ Q +R + S +SSS+
Sbjct: 289 ATDRQLYVAVQEIIMQQQRQVSDVSPFESSSSSS 322
>ref|XP_003555510.1| PREDICTED: RING-H2 finger protein ATL16-like [Glycine max]
Length = 364
Score = 58.9 bits (141), Expect = 7e-07
Identities = 37/85 (43%), Positives = 47/85 (55%), Gaps = 12/85 (14%)
Frame = +2
Query: 83 SPRRI--------KKWRKGQKVGSMGDEFVGDRCRCEQ----PMRRSFSMDSCNDSQLYL 226
SPR++ KK K QKV SMGDE + R + +Q P+RRSFSMDS D Q YL
Sbjct: 252 SPRKLLEHRNVQKKKTMKLQKVTSMGDECIDIRAKDDQFSVQPIRRSFSMDSSGDRQFYL 311
Query: 227 SIQEILRQSRRGSNQASGTGETSSS 301
++QE LR R N+ + S S
Sbjct: 312 AVQEALRHQNRQVNEVNSIEGCSGS 336
>ref|XP_002529293.1| ring finger protein, putative [Ricinus communis]
gi|223531217|gb|EEF33062.1| ring finger protein,
putative [Ricinus communis]
Length = 376
Score = 58.5 bits (140), Expect = 9e-07
Identities = 34/58 (58%), Positives = 41/58 (70%), Gaps = 4/58 (6%)
Frame = +2
Query: 98 KKWRKGQKVGSMGDEFVGDRCRCEQ----PMRRSFSMDSCNDSQLYLSIQEILRQSRR 259
KK RK K+ SMGDE + R + +Q P+RRSFSMDS D QLYLSIQEI+ QSR+
Sbjct: 277 KKSRKFSKLTSMGDECIDIRGKDDQFAIQPIRRSFSMDSSADRQLYLSIQEIILQSRQ 334
>ref|NP_199155.1| RING-H2 finger protein [Arabidopsis thaliana]
gi|68565310|sp|Q9LSW9.1|ATL16_ARATH RecName:
Full=RING-H2 finger protein ATL16
gi|8843895|dbj|BAA97421.1| unnamed protein product
[Arabidopsis thaliana] gi|30725342|gb|AAP37693.1|
At5g43420 [Arabidopsis thaliana]
gi|110736470|dbj|BAF00203.1| hypothetical protein
[Arabidopsis thaliana] gi|332007576|gb|AED94959.1|
RING-H2 finger protein [Arabidopsis thaliana]
Length = 375
Score = 58.2 bits (139), Expect = 1e-06
Identities = 37/90 (41%), Positives = 54/90 (60%), Gaps = 12/90 (13%)
Frame = +2
Query: 68 SSTNPSPRRI------KKWRKGQKVGSMGDEFVGDRCRCE------QPMRRSFSMDSCND 211
+S +PSP+++ +K+RK K+ SMGDE + R + QP+RRS SMDS D
Sbjct: 253 NSISPSPKKLDRGGLPRKFRKLHKMTSMGDECIDIRRGKDEQFGSIQPIRRSISMDSSAD 312
Query: 212 SQLYLSIQEILRQSRRGSNQASGTGETSSS 301
QLYL++QE +R++R G G +SSS
Sbjct: 313 RQLYLAVQEAIRKNREVLVVGDGGGCSSSS 342