BLASTX nr result
ID: Zingiber23_contig00045716
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00045716
(236 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006381018.1| hypothetical protein POPTR_0006s05420g [Popu... 133 3e-29
gb|EOY09358.1| Nuclear RNA polymerase A1 isoform 4 [Theobroma ca... 132 5e-29
gb|EOY09357.1| Nuclear RNA polymerase A1 isoform 3 [Theobroma ca... 132 5e-29
gb|EOY09356.1| Nuclear RNA polymerase A1, putative isoform 2 [Th... 132 5e-29
gb|EOY09355.1| Nuclear RNA polymerase A1, putative isoform 1 [Th... 132 5e-29
emb|CBI29879.3| unnamed protein product [Vitis vinifera] 128 7e-28
ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub... 128 7e-28
ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I sub... 127 2e-27
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni... 126 3e-27
ref|XP_006290488.1| hypothetical protein CARUB_v10016563mg [Caps... 126 3e-27
emb|CAN70028.1| hypothetical protein VITISV_029145 [Vitis vinifera] 126 3e-27
ref|XP_002876429.1| hypothetical protein ARALYDRAFT_486216 [Arab... 125 8e-27
ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I sub... 124 1e-26
gb|EMJ04262.1| hypothetical protein PRUPE_ppa000153mg [Prunus pe... 124 1e-26
gb|EXC04356.1| DNA-directed RNA polymerase I subunit rpa1 [Morus... 123 3e-26
ref|XP_006656244.1| PREDICTED: DNA-directed RNA polymerase I sub... 123 3e-26
ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 123 3e-26
ref|NP_191325.1| nuclear RNA polymerase A1 [Arabidopsis thaliana... 123 3e-26
ref|XP_006402858.1| hypothetical protein EUTSA_v10005738mg [Eutr... 122 5e-26
ref|XP_004299740.1| PREDICTED: DNA-directed RNA polymerase I sub... 122 6e-26
>ref|XP_006381018.1| hypothetical protein POPTR_0006s05420g [Populus trichocarpa]
gi|550335519|gb|ERP58815.1| hypothetical protein
POPTR_0006s05420g [Populus trichocarpa]
Length = 1132
Score = 133 bits (334), Expect = 3e-29
Identities = 63/78 (80%), Positives = 71/78 (91%)
Frame = -1
Query: 236 QKYLTSLADPGESVGVIAAQSVGEPSTQMTLNTFHLAGKGDMNVTLGIPRLQEILMTASK 57
QK+ TSLA PGE VGV+AAQSVGEPSTQMTLNTFHLAG+G+MNVTLGIPRLQEILMTAS
Sbjct: 571 QKFFTSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASA 630
Query: 56 DIRTPLMNCPLHAWKTKD 3
DI+TP+M CPLH +TK+
Sbjct: 631 DIKTPIMTCPLHEGRTKE 648
>gb|EOY09358.1| Nuclear RNA polymerase A1 isoform 4 [Theobroma cacao]
Length = 1397
Score = 132 bits (332), Expect = 5e-29
Identities = 64/77 (83%), Positives = 71/77 (92%)
Frame = -1
Query: 233 KYLTSLADPGESVGVIAAQSVGEPSTQMTLNTFHLAGKGDMNVTLGIPRLQEILMTASKD 54
K+L+SLA PGE VGV+AAQSVGEPSTQMTLNTFHLAG+G+MNVTLGIPRLQEILMTAS D
Sbjct: 858 KFLSSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASID 917
Query: 53 IRTPLMNCPLHAWKTKD 3
IRTP+M CPLH KTK+
Sbjct: 918 IRTPVMTCPLHKGKTKE 934
>gb|EOY09357.1| Nuclear RNA polymerase A1 isoform 3 [Theobroma cacao]
Length = 1400
Score = 132 bits (332), Expect = 5e-29
Identities = 64/77 (83%), Positives = 71/77 (92%)
Frame = -1
Query: 233 KYLTSLADPGESVGVIAAQSVGEPSTQMTLNTFHLAGKGDMNVTLGIPRLQEILMTASKD 54
K+L+SLA PGE VGV+AAQSVGEPSTQMTLNTFHLAG+G+MNVTLGIPRLQEILMTAS D
Sbjct: 861 KFLSSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASID 920
Query: 53 IRTPLMNCPLHAWKTKD 3
IRTP+M CPLH KTK+
Sbjct: 921 IRTPVMTCPLHKGKTKE 937
>gb|EOY09356.1| Nuclear RNA polymerase A1, putative isoform 2 [Theobroma cacao]
Length = 1689
Score = 132 bits (332), Expect = 5e-29
Identities = 64/77 (83%), Positives = 71/77 (92%)
Frame = -1
Query: 233 KYLTSLADPGESVGVIAAQSVGEPSTQMTLNTFHLAGKGDMNVTLGIPRLQEILMTASKD 54
K+L+SLA PGE VGV+AAQSVGEPSTQMTLNTFHLAG+G+MNVTLGIPRLQEILMTAS D
Sbjct: 1150 KFLSSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASID 1209
Query: 53 IRTPLMNCPLHAWKTKD 3
IRTP+M CPLH KTK+
Sbjct: 1210 IRTPVMTCPLHKGKTKE 1226
>gb|EOY09355.1| Nuclear RNA polymerase A1, putative isoform 1 [Theobroma cacao]
Length = 1665
Score = 132 bits (332), Expect = 5e-29
Identities = 64/77 (83%), Positives = 71/77 (92%)
Frame = -1
Query: 233 KYLTSLADPGESVGVIAAQSVGEPSTQMTLNTFHLAGKGDMNVTLGIPRLQEILMTASKD 54
K+L+SLA PGE VGV+AAQSVGEPSTQMTLNTFHLAG+G+MNVTLGIPRLQEILMTAS D
Sbjct: 1153 KFLSSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASID 1212
Query: 53 IRTPLMNCPLHAWKTKD 3
IRTP+M CPLH KTK+
Sbjct: 1213 IRTPVMTCPLHKGKTKE 1229
>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
Length = 1669
Score = 128 bits (322), Expect = 7e-28
Identities = 60/78 (76%), Positives = 71/78 (91%)
Frame = -1
Query: 236 QKYLTSLADPGESVGVIAAQSVGEPSTQMTLNTFHLAGKGDMNVTLGIPRLQEILMTASK 57
QKY++SLA PGE VGV+AAQSVGEPSTQMTLNTFHLAG+G++NVTLGIPRLQEILMTA+
Sbjct: 1137 QKYISSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEVNVTLGIPRLQEILMTAAN 1196
Query: 56 DIRTPLMNCPLHAWKTKD 3
DI+TP+M CPL ++KD
Sbjct: 1197 DIKTPIMTCPLQMGRSKD 1214
>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
vinifera]
Length = 1740
Score = 128 bits (322), Expect = 7e-28
Identities = 60/78 (76%), Positives = 71/78 (91%)
Frame = -1
Query: 236 QKYLTSLADPGESVGVIAAQSVGEPSTQMTLNTFHLAGKGDMNVTLGIPRLQEILMTASK 57
QKY++SLA PGE VGV+AAQSVGEPSTQMTLNTFHLAG+G++NVTLGIPRLQEILMTA+
Sbjct: 1208 QKYISSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEVNVTLGIPRLQEILMTAAN 1267
Query: 56 DIRTPLMNCPLHAWKTKD 3
DI+TP+M CPL ++KD
Sbjct: 1268 DIKTPIMTCPLQMGRSKD 1285
>ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
lycopersicum]
Length = 1677
Score = 127 bits (319), Expect = 2e-27
Identities = 60/78 (76%), Positives = 69/78 (88%)
Frame = -1
Query: 236 QKYLTSLADPGESVGVIAAQSVGEPSTQMTLNTFHLAGKGDMNVTLGIPRLQEILMTASK 57
QKY +SLAD GE VGV+A QSVGEPSTQMTLNTFHLAG+G+MNVTLGIPRLQEILMTAS+
Sbjct: 1146 QKYFSSLADSGEPVGVLAGQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASE 1205
Query: 56 DIRTPLMNCPLHAWKTKD 3
I+TP+M CP WK+K+
Sbjct: 1206 AIKTPIMTCPFLGWKSKN 1223
>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
polymerase I largest subunit, putative [Ricinus communis]
Length = 1686
Score = 126 bits (317), Expect = 3e-27
Identities = 61/78 (78%), Positives = 69/78 (88%)
Frame = -1
Query: 236 QKYLTSLADPGESVGVIAAQSVGEPSTQMTLNTFHLAGKGDMNVTLGIPRLQEILMTASK 57
QK+L SLA PGE VGV+AAQSVGEPSTQMTLNTFHLAG+G+MNVTLGIPRLQEILMTAS
Sbjct: 1138 QKFLLSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASI 1197
Query: 56 DIRTPLMNCPLHAWKTKD 3
DI+TP+M CPL +T +
Sbjct: 1198 DIKTPIMTCPLQEGRTNE 1215
>ref|XP_006290488.1| hypothetical protein CARUB_v10016563mg [Capsella rubella]
gi|482559195|gb|EOA23386.1| hypothetical protein
CARUB_v10016563mg [Capsella rubella]
Length = 1651
Score = 126 bits (316), Expect = 3e-27
Identities = 61/77 (79%), Positives = 68/77 (88%)
Frame = -1
Query: 233 KYLTSLADPGESVGVIAAQSVGEPSTQMTLNTFHLAGKGDMNVTLGIPRLQEILMTASKD 54
KY SLA PGE VGV+AAQSVGEPSTQMTLNTFHLAG+G+MNVTLGIPRLQEILMTA+ D
Sbjct: 1134 KYFESLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAAAD 1193
Query: 53 IRTPLMNCPLHAWKTKD 3
I+TP+M CPL KTK+
Sbjct: 1194 IKTPIMTCPLLKGKTKE 1210
>emb|CAN70028.1| hypothetical protein VITISV_029145 [Vitis vinifera]
Length = 1350
Score = 126 bits (316), Expect = 3e-27
Identities = 59/77 (76%), Positives = 70/77 (90%)
Frame = -1
Query: 236 QKYLTSLADPGESVGVIAAQSVGEPSTQMTLNTFHLAGKGDMNVTLGIPRLQEILMTASK 57
QKY++SLA PGE VGV+AAQSVGEPSTQMTLNTFHLAG+G++NVTLGIPRLQEILMTA+
Sbjct: 1274 QKYISSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEVNVTLGIPRLQEILMTAAN 1333
Query: 56 DIRTPLMNCPLHAWKTK 6
DI+TP+M CPL ++K
Sbjct: 1334 DIKTPIMTCPLQMGRSK 1350
>ref|XP_002876429.1| hypothetical protein ARALYDRAFT_486216 [Arabidopsis lyrata subsp.
lyrata] gi|297322267|gb|EFH52688.1| hypothetical protein
ARALYDRAFT_486216 [Arabidopsis lyrata subsp. lyrata]
Length = 1678
Score = 125 bits (313), Expect = 8e-27
Identities = 60/77 (77%), Positives = 68/77 (88%)
Frame = -1
Query: 233 KYLTSLADPGESVGVIAAQSVGEPSTQMTLNTFHLAGKGDMNVTLGIPRLQEILMTASKD 54
K+ SLA PGE VGV+AAQSVGEPSTQMTLNTFHLAG+G+MNVTLGIPRLQEILMTA+ D
Sbjct: 1148 KFFASLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAAAD 1207
Query: 53 IRTPLMNCPLHAWKTKD 3
I+TP+M CPL KTK+
Sbjct: 1208 IKTPIMTCPLLKGKTKE 1224
>ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
tuberosum]
Length = 1675
Score = 124 bits (312), Expect = 1e-26
Identities = 58/78 (74%), Positives = 69/78 (88%)
Frame = -1
Query: 236 QKYLTSLADPGESVGVIAAQSVGEPSTQMTLNTFHLAGKGDMNVTLGIPRLQEILMTASK 57
QKY +SLAD GE VGV+A QSVGEPSTQMTLNTFHLAG+G+MNVTLGIPRLQEILMTAS+
Sbjct: 1146 QKYFSSLADSGEPVGVLAGQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASE 1205
Query: 56 DIRTPLMNCPLHAWKTKD 3
I+TP++ CP W++K+
Sbjct: 1206 AIKTPILTCPFLGWQSKN 1223
>gb|EMJ04262.1| hypothetical protein PRUPE_ppa000153mg [Prunus persica]
Length = 1612
Score = 124 bits (312), Expect = 1e-26
Identities = 59/77 (76%), Positives = 68/77 (88%)
Frame = -1
Query: 233 KYLTSLADPGESVGVIAAQSVGEPSTQMTLNTFHLAGKGDMNVTLGIPRLQEILMTASKD 54
KYL SLA PGE VGV+A QSVGEPSTQMTLNTFHLAG+G+MNVTLGIPRLQEILMTA+ D
Sbjct: 1060 KYLCSLAQPGEPVGVLAGQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAAND 1119
Query: 53 IRTPLMNCPLHAWKTKD 3
I+TP+M CPL ++K+
Sbjct: 1120 IKTPVMTCPLQKGRSKE 1136
>gb|EXC04356.1| DNA-directed RNA polymerase I subunit rpa1 [Morus notabilis]
Length = 1770
Score = 123 bits (308), Expect = 3e-26
Identities = 59/70 (84%), Positives = 66/70 (94%)
Frame = -1
Query: 233 KYLTSLADPGESVGVIAAQSVGEPSTQMTLNTFHLAGKGDMNVTLGIPRLQEILMTASKD 54
KYL+SLA PGE VGV+AAQSVGEPSTQMTLNTFHLAG+G+MNVTLGIPRLQEILMTA+ D
Sbjct: 1137 KYLSSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAAID 1196
Query: 53 IRTPLMNCPL 24
I+TP+M CPL
Sbjct: 1197 IKTPVMTCPL 1206
>ref|XP_006656244.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Oryza
brachyantha]
Length = 1755
Score = 123 bits (308), Expect = 3e-26
Identities = 58/77 (75%), Positives = 68/77 (88%)
Frame = -1
Query: 233 KYLTSLADPGESVGVIAAQSVGEPSTQMTLNTFHLAGKGDMNVTLGIPRLQEILMTASKD 54
KYL+SL DPGE+VGV+AAQS+GEPSTQMTLNTFHLAG+G+MNVTLGIPRL+E+LMTAS
Sbjct: 1203 KYLSSLVDPGEAVGVVAAQSIGEPSTQMTLNTFHLAGRGEMNVTLGIPRLKELLMTASAK 1262
Query: 53 IRTPLMNCPLHAWKTKD 3
I TP M CP+ KT+D
Sbjct: 1263 ISTPFMKCPMLEDKTRD 1279
>ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit
RPA1-like [Cucumis sativus]
Length = 1652
Score = 123 bits (308), Expect = 3e-26
Identities = 58/70 (82%), Positives = 66/70 (94%)
Frame = -1
Query: 233 KYLTSLADPGESVGVIAAQSVGEPSTQMTLNTFHLAGKGDMNVTLGIPRLQEILMTASKD 54
KYL+SLA PGE VGV+AAQS+GEPSTQMTLNTFH AG+G+MNVTLGIPRLQEILMTAS+D
Sbjct: 1120 KYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASQD 1179
Query: 53 IRTPLMNCPL 24
I+TP+M CPL
Sbjct: 1180 IKTPIMTCPL 1189
>ref|NP_191325.1| nuclear RNA polymerase A1 [Arabidopsis thaliana]
gi|4678281|emb|CAB41189.1| DNA-directed RNA polymerase I
190K chain-like protein [Arabidopsis thaliana]
gi|332646163|gb|AEE79684.1| nuclear RNA polymerase A1
[Arabidopsis thaliana]
Length = 1670
Score = 123 bits (308), Expect = 3e-26
Identities = 59/77 (76%), Positives = 68/77 (88%)
Frame = -1
Query: 233 KYLTSLADPGESVGVIAAQSVGEPSTQMTLNTFHLAGKGDMNVTLGIPRLQEILMTASKD 54
K+ SLA PGE VGV+AAQSVGEPSTQMTLNTFHLAG+G+MNVTLGIPRLQEILMTA+ +
Sbjct: 1146 KFFASLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAAAN 1205
Query: 53 IRTPLMNCPLHAWKTKD 3
I+TP+M CPL KTK+
Sbjct: 1206 IKTPIMTCPLLKGKTKE 1222
>ref|XP_006402858.1| hypothetical protein EUTSA_v10005738mg [Eutrema salsugineum]
gi|557103957|gb|ESQ44311.1| hypothetical protein
EUTSA_v10005738mg [Eutrema salsugineum]
Length = 1697
Score = 122 bits (306), Expect = 5e-26
Identities = 59/77 (76%), Positives = 67/77 (87%)
Frame = -1
Query: 233 KYLTSLADPGESVGVIAAQSVGEPSTQMTLNTFHLAGKGDMNVTLGIPRLQEILMTASKD 54
K+ SLA PGE VGV+AAQSVGEPSTQMTLNTFHLAG+G+MNVTLGIPRLQEILMTA+ +
Sbjct: 1167 KFFASLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAAAN 1226
Query: 53 IRTPLMNCPLHAWKTKD 3
I+TP+M CPL KT D
Sbjct: 1227 IKTPIMTCPLLKGKTTD 1243
>ref|XP_004299740.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Fragaria
vesca subsp. vesca]
Length = 1673
Score = 122 bits (305), Expect = 6e-26
Identities = 58/77 (75%), Positives = 67/77 (87%)
Frame = -1
Query: 233 KYLTSLADPGESVGVIAAQSVGEPSTQMTLNTFHLAGKGDMNVTLGIPRLQEILMTASKD 54
K+L+SLA PGE VG++AAQSVGEPSTQMTLNTFH AG+ +MNVTLGIPRLQEILMTAS D
Sbjct: 1133 KFLSSLAQPGEPVGILAAQSVGEPSTQMTLNTFHNAGRSEMNVTLGIPRLQEILMTASND 1192
Query: 53 IRTPLMNCPLHAWKTKD 3
I+TP+M CPL K +D
Sbjct: 1193 IKTPVMTCPLRMGKAED 1209