BLASTX nr result
ID: Zingiber23_contig00045694
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00045694
(433 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002521232.1| Ribulose bisphosphate carboxylase small chai... 256 2e-66
ref|XP_002532149.1| Ribulose bisphosphate carboxylase small chai... 254 1e-65
gb|AAA33866.1| ribulose 1,5-bisphosphate carboxylase small subun... 251 5e-65
gb|ABS72189.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 251 9e-65
sp|Q39746.1|RBS4_FLAPR RecName: Full=Ribulose bisphosphate carbo... 249 2e-64
sp|Q39744.1|RBS2_FLAPR RecName: Full=Ribulose bisphosphate carbo... 248 5e-64
sp|Q02980.1|RBS_MALSP RecName: Full=Ribulose bisphosphate carbox... 248 6e-64
dbj|BAI53120.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ... 248 8e-64
gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/ox... 246 2e-63
dbj|BAE46384.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ... 245 4e-63
dbj|BAI53118.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ... 245 4e-63
sp|P08705.1|RBS_HELAN RecName: Full=Ribulose bisphosphate carbox... 245 5e-63
sp|P24007.1|RBS_PYRPY RecName: Full=Ribulose bisphosphate carbox... 245 5e-63
sp|Q39749.1|RBS7_FLAPR RecName: Full=Ribulose bisphosphate carbo... 244 7e-63
sp|Q39743.1|RBS1_FLAPR RecName: Full=Ribulose bisphosphate carbo... 244 7e-63
gb|AFS41724.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 244 7e-63
gb|AEX60836.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 244 7e-63
gb|AFS41744.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 244 9e-63
gb|AEX60841.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 244 9e-63
gb|AFS41770.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 244 1e-62
>ref|XP_002521232.1| Ribulose bisphosphate carboxylase small chain 1B, chloroplast
precursor, putative [Ricinus communis]
gi|223539597|gb|EEF41184.1| Ribulose bisphosphate
carboxylase small chain 1B, chloroplast precursor,
putative [Ricinus communis]
Length = 181
Score = 256 bits (654), Expect = 2e-66
Identities = 123/145 (84%), Positives = 135/145 (93%), Gaps = 1/145 (0%)
Frame = +2
Query: 2 ISTAAVATTRSSPAQANMVAPFTGLKSATAFPITKKSA-DITSLASNGGRVQCMQVWPPL 178
IS+A+V+ RSSPAQA MVAPFTGLKSA +FP+T+K+ DITS+ASNGGRVQCMQVWPPL
Sbjct: 6 ISSASVS--RSSPAQATMVAPFTGLKSAASFPVTRKANNDITSIASNGGRVQCMQVWPPL 63
Query: 179 GKKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGYYDGRYW 358
GKKK+ETLSYLPDLT EQLAKE+DYLLR GWIPCLEFELEHGFVYREN RSPGYYDGRYW
Sbjct: 64 GKKKFETLSYLPDLTDEQLAKEVDYLLRKGWIPCLEFELEHGFVYRENHRSPGYYDGRYW 123
Query: 359 TMWKLPMFGCNDSAQVLKELEEAKK 433
TMWKLPMFGC+DS QVLKEL+EAKK
Sbjct: 124 TMWKLPMFGCSDSTQVLKELDEAKK 148
>ref|XP_002532149.1| Ribulose bisphosphate carboxylase small chain, chloroplast
precursor, putative [Ricinus communis]
gi|223528159|gb|EEF30223.1| Ribulose bisphosphate
carboxylase small chain, chloroplast precursor, putative
[Ricinus communis]
Length = 185
Score = 254 bits (648), Expect = 1e-65
Identities = 119/146 (81%), Positives = 136/146 (93%), Gaps = 2/146 (1%)
Frame = +2
Query: 2 ISTAAVAT-TRSSPAQANMVAPFTGLKSATAFPITKKS-ADITSLASNGGRVQCMQVWPP 175
+STA VA+ R+SPAQA+MVAPFTGLKS +AFP+T+K+ DIT+LA+NGGRVQCMQVWPP
Sbjct: 6 LSTATVASLNRASPAQASMVAPFTGLKSTSAFPVTRKTNTDITTLANNGGRVQCMQVWPP 65
Query: 176 LGKKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGYYDGRY 355
LGKKK+ETLSYLPDLT EQLAKE++YLLR GW+PCLEFELEHGFVYRENARSPGYYDGRY
Sbjct: 66 LGKKKFETLSYLPDLTREQLAKEVEYLLRKGWVPCLEFELEHGFVYRENARSPGYYDGRY 125
Query: 356 WTMWKLPMFGCNDSAQVLKELEEAKK 433
WTMWKLPMFGC+D+ QVLKEL+EA K
Sbjct: 126 WTMWKLPMFGCSDAVQVLKELDEAIK 151
>gb|AAA33866.1| ribulose 1,5-bisphosphate carboxylase small subunit [Malus
domestica x Pyrus communis]
Length = 179
Score = 251 bits (642), Expect = 5e-65
Identities = 118/144 (81%), Positives = 130/144 (90%)
Frame = +2
Query: 2 ISTAAVATTRSSPAQANMVAPFTGLKSATAFPITKKSADITSLASNGGRVQCMQVWPPLG 181
IS+ VAT S+PAQA MVAPFTGLKS++AFP+T+KS DITS+ASNGGRVQCMQVWPPLG
Sbjct: 6 ISSGTVATV-SAPAQARMVAPFTGLKSSSAFPVTRKSNDITSIASNGGRVQCMQVWPPLG 64
Query: 182 KKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGYYDGRYWT 361
KK+ETLSYLP L+ E LAKE+DYLLR W+PCLEFELEHGFVYREN RSPGYYDGRYWT
Sbjct: 65 LKKFETLSYLPPLSTESLAKEVDYLLRKNWVPCLEFELEHGFVYRENNRSPGYYDGRYWT 124
Query: 362 MWKLPMFGCNDSAQVLKELEEAKK 433
MWKLPMFGC DS+QVLKELEEAKK
Sbjct: 125 MWKLPMFGCTDSSQVLKELEEAKK 148
>gb|ABS72189.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit 1A
[Corchorus olitorius]
Length = 183
Score = 251 bits (640), Expect = 9e-65
Identities = 118/143 (82%), Positives = 130/143 (90%), Gaps = 1/143 (0%)
Frame = +2
Query: 8 TAAVATTRSSPAQANMVAPFTGLKSATAFPITKKS-ADITSLASNGGRVQCMQVWPPLGK 184
++A R+SPAQA +VAPFTGLKSA+AFP T+K+ DITS+ASNGGRVQCMQVWPPLGK
Sbjct: 7 SSATVVNRASPAQATLVAPFTGLKSASAFPTTRKNNRDITSIASNGGRVQCMQVWPPLGK 66
Query: 185 KKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGYYDGRYWTM 364
KK+ETLSYLPDLT QLAKE+DYLLRSGWIPCLEFELEHGFVYRE+ SPGYYDGRYWTM
Sbjct: 67 KKFETLSYLPDLTPVQLAKEVDYLLRSGWIPCLEFELEHGFVYREHHHSPGYYDGRYWTM 126
Query: 365 WKLPMFGCNDSAQVLKELEEAKK 433
WKLPMFGC DS+QVLKELEEAKK
Sbjct: 127 WKLPMFGCTDSSQVLKELEEAKK 149
>sp|Q39746.1|RBS4_FLAPR RecName: Full=Ribulose bisphosphate carboxylase small chain 4,
chloroplastic; Short=RuBisCO small subunit 4; Flags:
Precursor gi|967225|gb|AAB67848.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit protein [Flaveria pringlei]
Length = 178
Score = 249 bits (637), Expect = 2e-64
Identities = 114/144 (79%), Positives = 128/144 (88%)
Frame = +2
Query: 2 ISTAAVATTRSSPAQANMVAPFTGLKSATAFPITKKSADITSLASNGGRVQCMQVWPPLG 181
IS+ +R++PAQANMVAPFTGLKS AFP TKK+ D ++L SNGGRVQCM+VWPPLG
Sbjct: 4 ISSTVATVSRAAPAQANMVAPFTGLKSNAAFPATKKANDFSTLPSNGGRVQCMKVWPPLG 63
Query: 182 KKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGYYDGRYWT 361
KKKYETLSYLP+LT QLAKE+DYLLR+ W+PCLEFELEHGFVYRENARSPGYYDGRYWT
Sbjct: 64 KKKYETLSYLPNLTEAQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWT 123
Query: 362 MWKLPMFGCNDSAQVLKELEEAKK 433
MWKLPMFGC DSAQV+KEL+E KK
Sbjct: 124 MWKLPMFGCTDSAQVMKELQECKK 147
>sp|Q39744.1|RBS2_FLAPR RecName: Full=Ribulose bisphosphate carboxylase small chain 2,
chloroplastic; Short=RuBisCO small subunit 2; Flags:
Precursor gi|967221|gb|AAB67846.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit protein [Flaveria pringlei]
Length = 178
Score = 248 bits (634), Expect = 5e-64
Identities = 113/144 (78%), Positives = 128/144 (88%)
Frame = +2
Query: 2 ISTAAVATTRSSPAQANMVAPFTGLKSATAFPITKKSADITSLASNGGRVQCMQVWPPLG 181
IS+ +R++PAQANMVAPFTGLKS AFP TKK+ D ++L SNGGRVQCM+VWPPLG
Sbjct: 4 ISSTVATVSRAAPAQANMVAPFTGLKSNVAFPATKKANDFSTLPSNGGRVQCMKVWPPLG 63
Query: 182 KKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGYYDGRYWT 361
KK+YETLSYLP+LT QLAKE+DYLLR+ W+PCLEFELEHGFVYRENARSPGYYDGRYWT
Sbjct: 64 KKRYETLSYLPNLTEAQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWT 123
Query: 362 MWKLPMFGCNDSAQVLKELEEAKK 433
MWKLPMFGC DSAQV+KEL+E KK
Sbjct: 124 MWKLPMFGCTDSAQVMKELQECKK 147
>sp|Q02980.1|RBS_MALSP RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor gi|19581|emb|CAA46475.1| ribulose bisphosphate
carboxylase [Malus sp.]
Length = 183
Score = 248 bits (633), Expect = 6e-64
Identities = 114/143 (79%), Positives = 127/143 (88%)
Frame = +2
Query: 5 STAAVATTRSSPAQANMVAPFTGLKSATAFPITKKSADITSLASNGGRVQCMQVWPPLGK 184
+ A V+ R +PAQA MVAPFTGLKS++A P+T+KS DITS+ASNGGRVQCMQVWPPLG
Sbjct: 10 TVATVSADRPAPAQARMVAPFTGLKSSSASPVTRKSNDITSIASNGGRVQCMQVWPPLGL 69
Query: 185 KKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGYYDGRYWTM 364
KK+ETLSYLP L+ E LAKE+DYLLR W+PCLEFELEHGFVYREN RSPGYYDGRYWTM
Sbjct: 70 KKFETLSYLPPLSTESLAKEVDYLLRKNWVPCLEFELEHGFVYRENHRSPGYYDGRYWTM 129
Query: 365 WKLPMFGCNDSAQVLKELEEAKK 433
WKLPMFGC DS+QVLKELEEAKK
Sbjct: 130 WKLPMFGCTDSSQVLKELEEAKK 152
>dbj|BAI53120.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Eucalyptus globulus]
Length = 179
Score = 248 bits (632), Expect = 8e-64
Identities = 115/136 (84%), Positives = 128/136 (94%), Gaps = 1/136 (0%)
Frame = +2
Query: 29 RSSPAQANMVAPFTGLKSATAFPITKKSA-DITSLASNGGRVQCMQVWPPLGKKKYETLS 205
R++PAQA MVAPFTGLKSA+AFP+T+KS+ DITSL+SNGGRVQCMQVWPP+GKKK+ETLS
Sbjct: 13 RATPAQATMVAPFTGLKSASAFPVTRKSSEDITSLSSNGGRVQCMQVWPPIGKKKFETLS 72
Query: 206 YLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFG 385
YLP L+ E LAKE+DYLLRSGW+PCLEFELEHGFVYRE+ SPGYYDGRYWTMWKLPMFG
Sbjct: 73 YLPPLSPESLAKEVDYLLRSGWVPCLEFELEHGFVYREHHSSPGYYDGRYWTMWKLPMFG 132
Query: 386 CNDSAQVLKELEEAKK 433
C DSAQVLKELEEAKK
Sbjct: 133 CTDSAQVLKELEEAKK 148
>gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Aralia elata]
Length = 183
Score = 246 bits (628), Expect = 2e-63
Identities = 115/145 (79%), Positives = 131/145 (90%), Gaps = 1/145 (0%)
Frame = +2
Query: 2 ISTAAVAT-TRSSPAQANMVAPFTGLKSATAFPITKKSADITSLASNGGRVQCMQVWPPL 178
IS+A+VA +R++PAQA+MVAPFTGLKS AFP+T+K DITSL SNGGRVQCM+VWPPL
Sbjct: 6 ISSASVAAVSRAAPAQASMVAPFTGLKSTAAFPVTRKVNDITSLPSNGGRVQCMKVWPPL 65
Query: 179 GKKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGYYDGRYW 358
G KK+ETLSYLP LT E+LAKE+DYLLRSGW+PCLEFELEHG+VYREN RSPGYYDGRYW
Sbjct: 66 GLKKFETLSYLPPLTNEELAKEVDYLLRSGWVPCLEFELEHGWVYRENHRSPGYYDGRYW 125
Query: 359 TMWKLPMFGCNDSAQVLKELEEAKK 433
TMWKLPMFGC DS+QVL E+EE KK
Sbjct: 126 TMWKLPMFGCTDSSQVLNEVEECKK 150
>dbj|BAE46384.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Panax ginseng]
Length = 183
Score = 245 bits (626), Expect = 4e-63
Identities = 115/145 (79%), Positives = 129/145 (88%), Gaps = 1/145 (0%)
Frame = +2
Query: 2 ISTAAVAT-TRSSPAQANMVAPFTGLKSATAFPITKKSADITSLASNGGRVQCMQVWPPL 178
IS+A VA +R+ PAQA+MVAPFTGLKS AFP+T+K DITSL SNGGRVQCM+VWPPL
Sbjct: 6 ISSATVAAVSRAVPAQASMVAPFTGLKSTAAFPVTRKVNDITSLPSNGGRVQCMKVWPPL 65
Query: 179 GKKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGYYDGRYW 358
G KK+ETLSYLP LT EQL+KE+DYLLRSGW+PCLEFELEHGFVYRE+ SPGYYDGRYW
Sbjct: 66 GLKKFETLSYLPQLTQEQLSKEVDYLLRSGWVPCLEFELEHGFVYREHHHSPGYYDGRYW 125
Query: 359 TMWKLPMFGCNDSAQVLKELEEAKK 433
TMWKLPMFGC DS+QVLKE+EE KK
Sbjct: 126 TMWKLPMFGCTDSSQVLKEVEECKK 150
>dbj|BAI53118.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Eucalyptus globulus]
Length = 181
Score = 245 bits (626), Expect = 4e-63
Identities = 118/145 (81%), Positives = 128/145 (88%), Gaps = 1/145 (0%)
Frame = +2
Query: 2 ISTAAVATTRS-SPAQANMVAPFTGLKSATAFPITKKSADITSLASNGGRVQCMQVWPPL 178
+S+AAVA +S SP QA MVAPFTGLKSA+AFP+T+KS DITSL SNGGRVQCMQVWPP+
Sbjct: 6 LSSAAVAAVKSTSPVQAAMVAPFTGLKSASAFPVTRKSNDITSLPSNGGRVQCMQVWPPV 65
Query: 179 GKKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGYYDGRYW 358
G KK+ETLSYLP LT QLAKEIDYLLRSGW+PCLEFE E GFVYRE+ SPGYYDGRYW
Sbjct: 66 GLKKFETLSYLPPLTPTQLAKEIDYLLRSGWVPCLEFETEKGFVYREHHHSPGYYDGRYW 125
Query: 359 TMWKLPMFGCNDSAQVLKELEEAKK 433
TMWKLPMFGC DSAQVLKELEE KK
Sbjct: 126 TMWKLPMFGCTDSAQVLKELEECKK 150
>sp|P08705.1|RBS_HELAN RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor gi|18808|emb|CAA68490.1| ribulose bisphosphate
carboxylase [Helianthus annuus]
gi|755735|emb|CAA28737.1| RuBisCO (SSU) [Helianthus
annuus]
Length = 178
Score = 245 bits (625), Expect = 5e-63
Identities = 113/144 (78%), Positives = 125/144 (86%)
Frame = +2
Query: 2 ISTAAVATTRSSPAQANMVAPFTGLKSATAFPITKKSADITSLASNGGRVQCMQVWPPLG 181
IS++ +R++PAQANMVAPFTGLKS AFP TKK+ D ++L SNGGRVQCM+VWPPLG
Sbjct: 4 ISSSVATVSRTAPAQANMVAPFTGLKSNAAFPTTKKANDFSTLPSNGGRVQCMKVWPPLG 63
Query: 182 KKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGYYDGRYWT 361
KKYETLSYLP LT QLAKE+DYLLR W+PCLEFELEHGFVYRENARSPGYYDGRYWT
Sbjct: 64 LKKYETLSYLPPLTETQLAKEVDYLLRKKWVPCLEFELEHGFVYRENARSPGYYDGRYWT 123
Query: 362 MWKLPMFGCNDSAQVLKELEEAKK 433
MWKLPMFGC DSAQV+KEL E KK
Sbjct: 124 MWKLPMFGCTDSAQVMKELAECKK 147
>sp|P24007.1|RBS_PYRPY RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor gi|218021|dbj|BAA00450.1| RuBisCO small
subunit [Pyrus pyrifolia var. culta]
Length = 183
Score = 245 bits (625), Expect = 5e-63
Identities = 113/143 (79%), Positives = 126/143 (88%)
Frame = +2
Query: 5 STAAVATTRSSPAQANMVAPFTGLKSATAFPITKKSADITSLASNGGRVQCMQVWPPLGK 184
+ A V+ R +PAQA MVAPF GLKS++AFP+T+KS DITS+ASNGGRVQCMQVWPPLG
Sbjct: 10 TVATVSADRPAPAQARMVAPFNGLKSSSAFPVTRKSNDITSIASNGGRVQCMQVWPPLGL 69
Query: 185 KKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGYYDGRYWTM 364
KK+ETLSYLP L+ E LAKE+DYLLR W+PCLEFELE GFVYREN RSPGYYDGRYWTM
Sbjct: 70 KKFETLSYLPPLSSESLAKEVDYLLRKNWVPCLEFELETGFVYRENHRSPGYYDGRYWTM 129
Query: 365 WKLPMFGCNDSAQVLKELEEAKK 433
WKLPMFGC DS+QVLKELEEAKK
Sbjct: 130 WKLPMFGCTDSSQVLKELEEAKK 152
>sp|Q39749.1|RBS7_FLAPR RecName: Full=Ribulose bisphosphate carboxylase small chain 7,
chloroplastic; Short=RuBisCO small subunit 7; Flags:
Precursor gi|967231|gb|AAB67851.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit protein [Flaveria pringlei]
Length = 173
Score = 244 bits (624), Expect = 7e-63
Identities = 112/141 (79%), Positives = 127/141 (90%)
Frame = +2
Query: 11 AAVATTRSSPAQANMVAPFTGLKSATAFPITKKSADITSLASNGGRVQCMQVWPPLGKKK 190
A++ T ++ AQANMVAPFTGLKS AFP+TKK D ++LASNGGRVQCM+VWPPLGKK+
Sbjct: 2 ASIPATVATVAQANMVAPFTGLKSNAAFPVTKKVNDFSTLASNGGRVQCMKVWPPLGKKR 61
Query: 191 YETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGYYDGRYWTMWK 370
YETLSYLP+LT QLAKE+DYLLR+ W+PCLEFELEHGFVYRENARSPGYYDGRYWTMWK
Sbjct: 62 YETLSYLPNLTEVQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWK 121
Query: 371 LPMFGCNDSAQVLKELEEAKK 433
LPMFGC DSAQV+KEL+E KK
Sbjct: 122 LPMFGCTDSAQVMKELQECKK 142
>sp|Q39743.1|RBS1_FLAPR RecName: Full=Ribulose bisphosphate carboxylase small chain 1,
chloroplastic; Short=RuBisCO small subunit 1; Flags:
Precursor gi|967219|gb|AAB67845.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit protein [Flaveria pringlei]
Length = 173
Score = 244 bits (624), Expect = 7e-63
Identities = 112/141 (79%), Positives = 126/141 (89%)
Frame = +2
Query: 11 AAVATTRSSPAQANMVAPFTGLKSATAFPITKKSADITSLASNGGRVQCMQVWPPLGKKK 190
A++ T ++ AQANMVAPFTGLK+ AFP+TKK D ++L SNGGRVQCM+VWPPLGKKK
Sbjct: 2 ASIPATVATVAQANMVAPFTGLKANAAFPVTKKVNDFSTLPSNGGRVQCMKVWPPLGKKK 61
Query: 191 YETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGYYDGRYWTMWK 370
YETLSYLPDLT QLAKE+DYLLR+ W+PCLEFELEHGFVYRENARSPGYYDGRYWTMWK
Sbjct: 62 YETLSYLPDLTEVQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWK 121
Query: 371 LPMFGCNDSAQVLKELEEAKK 433
LPMFGC DSAQV+KEL+E KK
Sbjct: 122 LPMFGCTDSAQVMKELQECKK 142
>gb|AFS41724.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium raimondii]
Length = 182
Score = 244 bits (624), Expect = 7e-63
Identities = 120/146 (82%), Positives = 131/146 (89%), Gaps = 2/146 (1%)
Frame = +2
Query: 2 ISTAAVATT-RSSPAQANMVAPFTGLKSATAFPITKKSA-DITSLASNGGRVQCMQVWPP 175
IS+A +AT RSSPAQANMVAPFTGLKSA+AFP+T+K+ DITSLASNGGRVQCMQVWPP
Sbjct: 6 ISSATIATVNRSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCMQVWPP 65
Query: 176 LGKKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGYYDGRY 355
LGKKK+ETLSYLPDLT QLAKE+DYLLRS WIPCLEFELE GFV+R+ + P YYDGRY
Sbjct: 66 LGKKKFETLSYLPDLTPVQLAKEVDYLLRSKWIPCLEFELEEGFVHRKYSNLPTYYDGRY 125
Query: 356 WTMWKLPMFGCNDSAQVLKELEEAKK 433
WTMWKLPMFGC DSAQVLKELEE KK
Sbjct: 126 WTMWKLPMFGCTDSAQVLKELEECKK 151
>gb|AEX60836.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit,
partial (chloroplast) [Gossypium raimondii]
Length = 168
Score = 244 bits (624), Expect = 7e-63
Identities = 120/146 (82%), Positives = 131/146 (89%), Gaps = 2/146 (1%)
Frame = +2
Query: 2 ISTAAVATT-RSSPAQANMVAPFTGLKSATAFPITKKSA-DITSLASNGGRVQCMQVWPP 175
IS+A +AT RSSPAQANMVAPFTGLKSA+AFP+T+K+ DITSLASNGGRVQCMQVWPP
Sbjct: 6 ISSATIATVNRSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCMQVWPP 65
Query: 176 LGKKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGYYDGRY 355
LGKKK+ETLSYLPDLT QLAKE+DYLLRS WIPCLEFELE GFV+R+ + P YYDGRY
Sbjct: 66 LGKKKFETLSYLPDLTPVQLAKEVDYLLRSKWIPCLEFELEEGFVHRKYSNLPTYYDGRY 125
Query: 356 WTMWKLPMFGCNDSAQVLKELEEAKK 433
WTMWKLPMFGC DSAQVLKELEE KK
Sbjct: 126 WTMWKLPMFGCTDSAQVLKELEECKK 151
>gb|AFS41744.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium tomentosum]
Length = 182
Score = 244 bits (623), Expect = 9e-63
Identities = 120/146 (82%), Positives = 131/146 (89%), Gaps = 2/146 (1%)
Frame = +2
Query: 2 ISTAAVATT-RSSPAQANMVAPFTGLKSATAFPITKKSA-DITSLASNGGRVQCMQVWPP 175
IS+A +AT RSSPAQANMVAPFTGLKSA+AFP+T+K+ DITSLASNGGRVQCMQVWPP
Sbjct: 6 ISSATIATVNRSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCMQVWPP 65
Query: 176 LGKKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGYYDGRY 355
LGKKK+ETLSYLPDLT QLAKE+DYLLRS WIPCLEFELE GFV+R+ + P YYDGRY
Sbjct: 66 LGKKKFETLSYLPDLTPVQLAKEVDYLLRSKWIPCLEFELEEGFVHRKYSSLPTYYDGRY 125
Query: 356 WTMWKLPMFGCNDSAQVLKELEEAKK 433
WTMWKLPMFGC DSAQVLKELEE KK
Sbjct: 126 WTMWKLPMFGCTDSAQVLKELEECKK 151
>gb|AEX60841.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium hirsutum]
gi|406366462|gb|AFS41728.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium hirsutum] gi|406366476|gb|AFS41735.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium barbadense]
gi|406366492|gb|AFS41743.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium tomentosum] gi|406366506|gb|AFS41750.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium mustelinum]
gi|406366520|gb|AFS41757.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium darwinii]
Length = 182
Score = 244 bits (623), Expect = 9e-63
Identities = 120/146 (82%), Positives = 131/146 (89%), Gaps = 2/146 (1%)
Frame = +2
Query: 2 ISTAAVATT-RSSPAQANMVAPFTGLKSATAFPITKKSA-DITSLASNGGRVQCMQVWPP 175
IS+A +AT RSSPAQANMVAPFTGLKSA+AFP+T+K+ DITSLASNGGRVQCMQVWPP
Sbjct: 6 ISSATIATVNRSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCMQVWPP 65
Query: 176 LGKKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGYYDGRY 355
LGKKK+ETLSYLPDLT QLAKE+DYLLRS WIPCLEFELE GFV+R+ + P YYDGRY
Sbjct: 66 LGKKKFETLSYLPDLTPVQLAKEVDYLLRSKWIPCLEFELEEGFVHRKYSSLPTYYDGRY 125
Query: 356 WTMWKLPMFGCNDSAQVLKELEEAKK 433
WTMWKLPMFGC DSAQVLKELEE KK
Sbjct: 126 WTMWKLPMFGCTDSAQVLKELEECKK 151
>gb|AFS41770.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit,
partial (chloroplast) [Gossypium gossypioides]
Length = 168
Score = 244 bits (622), Expect = 1e-62
Identities = 119/143 (83%), Positives = 129/143 (90%), Gaps = 2/143 (1%)
Frame = +2
Query: 11 AAVATT-RSSPAQANMVAPFTGLKSATAFPITKKSA-DITSLASNGGRVQCMQVWPPLGK 184
A +AT RSSPAQANMVAPFTGLKSA+AFP+T+K+ DITSLASNGGRVQCMQVWPPLGK
Sbjct: 1 ATIATVNRSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCMQVWPPLGK 60
Query: 185 KKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGYYDGRYWTM 364
KK+ETLSYLPDLT QLAKE+DYLLRS WIPCLEFELE GFV+R+ + PGYYDGRYWTM
Sbjct: 61 KKFETLSYLPDLTPVQLAKEVDYLLRSKWIPCLEFELEEGFVHRKYSSLPGYYDGRYWTM 120
Query: 365 WKLPMFGCNDSAQVLKELEEAKK 433
WKLPMFGC DSAQVLKELEE KK
Sbjct: 121 WKLPMFGCTDSAQVLKELEECKK 143