BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00045544
         (300 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFN53666.1| hypothetical protein [Linum usitatissimum]              63   4e-08
ref|XP_006350917.1| PREDICTED: pentatricopeptide repeat-containi...    63   5e-08
ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp....    63   5e-08
gb|EPS69071.1| hypothetical protein M569_05691, partial [Genlise...    62   6e-08
gb|EMJ07625.1| hypothetical protein PRUPE_ppa001946mg [Prunus pe...    62   8e-08
emb|CBI15973.3| unnamed protein product [Vitis vinifera]               61   1e-07
ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containi...    61   1e-07
emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]    61   1e-07
ref|XP_006293749.1| hypothetical protein CARUB_v10022711mg [Caps...    61   2e-07
ref|NP_180537.1| RNA editing factor OTP81 [Arabidopsis thaliana]...    60   2e-07
gb|EOY33741.1| Tetratricopeptide repeat (TPR)-like superfamily p...    58   1e-06
ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containi...    58   2e-06
ref|XP_006410036.1| hypothetical protein EUTSA_v10016305mg [Eutr...    57   3e-06
ref|XP_004241167.1| PREDICTED: pentatricopeptide repeat-containi...    57   3e-06
ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containi...    57   3e-06
ref|XP_004295750.1| PREDICTED: pentatricopeptide repeat-containi...    56   6e-06
ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containi...    55   1e-05

>gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
          Length = 850

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 29/62 (46%), Positives = 39/62 (62%)
 Frame = -3

Query: 271 QSCSSIRQLLQIHAHMLRRRFLDDPFATTELLRSSLAFPFAGTLYARKLLAQIPHPTTFA 92
           Q C+S +QL QIHA MLR   L DP+A +EL  ++    F+   YARK+  QIP P  ++
Sbjct: 147 QQCTSFKQLKQIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIPQPNLYS 206

Query: 91  WN 86
           WN
Sbjct: 207 WN 208


>ref|XP_006350917.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Solanum tuberosum]
          Length = 744

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 28/66 (42%), Positives = 41/66 (62%)
 Frame = -3

Query: 283 LLFLQSCSSIRQLLQIHAHMLRRRFLDDPFATTELLRSSLAFPFAGTLYARKLLAQIPHP 104
           +L +  C SI+QL QIHA+MLR     DPF+ ++L+ +S    F+   YA K+  +IP P
Sbjct: 39  VLLIDKCQSIKQLKQIHAYMLRIGLFSDPFSASKLIEASSLSHFSSLDYAHKVFDEIPQP 98

Query: 103 TTFAWN 86
             F+WN
Sbjct: 99  NLFSWN 104


>ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297325073|gb|EFH55493.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 740

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 27/63 (42%), Positives = 38/63 (60%)
 Frame = -3

Query: 274 LQSCSSIRQLLQIHAHMLRRRFLDDPFATTELLRSSLAFPFAGTLYARKLLAQIPHPTTF 95
           +  CSS+RQL Q HAHM+R     DP++ ++L   +    FA   YARK+  +IP P +F
Sbjct: 38  IDRCSSLRQLKQTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIPQPNSF 97

Query: 94  AWN 86
            WN
Sbjct: 98  TWN 100


>gb|EPS69071.1| hypothetical protein M569_05691, partial [Genlisea aurea]
          Length = 726

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 28/63 (44%), Positives = 39/63 (61%)
 Frame = -3

Query: 274 LQSCSSIRQLLQIHAHMLRRRFLDDPFATTELLRSSLAFPFAGTLYARKLLAQIPHPTTF 95
           +  C+S +QL QIH  MLR   LDDPFA ++L+  S    F+   YA+K+  Q+P P  F
Sbjct: 17  IDRCTSQKQLKQIHCQMLRSGLLDDPFAASKLISLSALSDFSSLAYAQKVFDQMPRPNLF 76

Query: 94  AWN 86
           +WN
Sbjct: 77  SWN 79


>gb|EMJ07625.1| hypothetical protein PRUPE_ppa001946mg [Prunus persica]
          Length = 738

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 28/71 (39%), Positives = 43/71 (60%)
 Frame = -3

Query: 298 SAASCLLFLQSCSSIRQLLQIHAHMLRRRFLDDPFATTELLRSSLAFPFAGTLYARKLLA 119
           S+   L  +  C+SI+QL Q+HA MLR   L DP++ ++L+ +S    F+   YAR++  
Sbjct: 29  SSHPALSLIDQCTSIKQLKQVHAQMLRTGVLFDPYSASKLITASALSSFSSLDYARQVFD 88

Query: 118 QIPHPTTFAWN 86
           QIP P  + WN
Sbjct: 89  QIPQPNVYTWN 99


>emb|CBI15973.3| unnamed protein product [Vitis vinifera]
          Length = 652

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 27/66 (40%), Positives = 38/66 (57%)
 Frame = -3

Query: 283 LLFLQSCSSIRQLLQIHAHMLRRRFLDDPFATTELLRSSLAFPFAGTLYARKLLAQIPHP 104
           L  +  CS  +QL QIHA MLR     DPF+ + L+ ++   PF    YA+++  QIPHP
Sbjct: 39  LSLIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHP 98

Query: 103 TTFAWN 86
             + WN
Sbjct: 99  NLYTWN 104


>ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 743

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 27/66 (40%), Positives = 38/66 (57%)
 Frame = -3

Query: 283 LLFLQSCSSIRQLLQIHAHMLRRRFLDDPFATTELLRSSLAFPFAGTLYARKLLAQIPHP 104
           L  +  CS  +QL QIHA MLR     DPF+ + L+ ++   PF    YA+++  QIPHP
Sbjct: 39  LSLIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHP 98

Query: 103 TTFAWN 86
             + WN
Sbjct: 99  NLYTWN 104


>emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
          Length = 694

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 27/66 (40%), Positives = 38/66 (57%)
 Frame = -3

Query: 283 LLFLQSCSSIRQLLQIHAHMLRRRFLDDPFATTELLRSSLAFPFAGTLYARKLLAQIPHP 104
           L  +  CS  +QL QIHA MLR     DPF+ + L+ ++   PF    YA+++  QIPHP
Sbjct: 39  LSLIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHP 98

Query: 103 TTFAWN 86
             + WN
Sbjct: 99  NLYTWN 104


>ref|XP_006293749.1| hypothetical protein CARUB_v10022711mg [Capsella rubella]
           gi|482562457|gb|EOA26647.1| hypothetical protein
           CARUB_v10022711mg [Capsella rubella]
          Length = 739

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 26/63 (41%), Positives = 38/63 (60%)
 Frame = -3

Query: 274 LQSCSSIRQLLQIHAHMLRRRFLDDPFATTELLRSSLAFPFAGTLYARKLLAQIPHPTTF 95
           +  CS++RQL Q HAHM+R     DP++ ++L   +    FA   YARK+  +IP P +F
Sbjct: 38  IDRCSNLRQLKQTHAHMIRTGTFSDPYSASKLFAIAALSSFASLEYARKVFDEIPQPNSF 97

Query: 94  AWN 86
            WN
Sbjct: 98  TWN 100


>ref|NP_180537.1| RNA editing factor OTP81 [Arabidopsis thaliana]
           gi|75100656|sp|O82380.1|PP175_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g29760, chloroplastic; Flags: Precursor
           gi|3582328|gb|AAC35225.1| hypothetical protein
           [Arabidopsis thaliana] gi|330253207|gb|AEC08301.1| RNA
           editing factor OTP81 [Arabidopsis thaliana]
          Length = 738

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 26/63 (41%), Positives = 38/63 (60%)
 Frame = -3

Query: 274 LQSCSSIRQLLQIHAHMLRRRFLDDPFATTELLRSSLAFPFAGTLYARKLLAQIPHPTTF 95
           ++ C S+RQL Q H HM+R     DP++ ++L   +    FA   YARK+  +IP P +F
Sbjct: 37  IERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSF 96

Query: 94  AWN 86
           AWN
Sbjct: 97  AWN 99


>gb|EOY33741.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
           cacao]
          Length = 733

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 25/63 (39%), Positives = 38/63 (60%)
 Frame = -3

Query: 274 LQSCSSIRQLLQIHAHMLRRRFLDDPFATTELLRSSLAFPFAGTLYARKLLAQIPHPTTF 95
           +  C+++ QL QIHA MLR     +P++ ++L  +S   PF+   YARK+  QIP P  +
Sbjct: 32  INQCTNLNQLKQIHAQMLRTGLFFNPYSASKLFAASALSPFSSLDYARKVFDQIPKPNLY 91

Query: 94  AWN 86
            WN
Sbjct: 92  TWN 94


>ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 711

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 31/93 (33%), Positives = 45/93 (48%)
 Frame = -3

Query: 286 CLLFLQSCSSIRQLLQIHAHMLRRRFLDDPFATTELLRSSLAFPFAGTLYARKLLAQIPH 107
           CLL L+ C+++ QL QIHA MLR     DPF+ ++++            YAR +  QIP+
Sbjct: 43  CLLSLEKCTTMSQLKQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPN 102

Query: 106 PTTFAWNXXXXXXXXXXXXXXXXSFFRCMLSSG 8
           PTTF  N                 F++ M+  G
Sbjct: 103 PTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQG 135


>ref|XP_006410036.1| hypothetical protein EUTSA_v10016305mg [Eutrema salsugineum]
           gi|557111205|gb|ESQ51489.1| hypothetical protein
           EUTSA_v10016305mg [Eutrema salsugineum]
          Length = 739

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/66 (39%), Positives = 38/66 (57%)
 Frame = -3

Query: 283 LLFLQSCSSIRQLLQIHAHMLRRRFLDDPFATTELLRSSLAFPFAGTLYARKLLAQIPHP 104
           L  +  C+ +RQL QIHA M+R    +D ++ ++L   +   PFA   YA K+  QIP P
Sbjct: 35  LSLIDRCADLRQLKQIHAQMVRTGLFNDHYSASKLFAIAALSPFASLDYACKVFDQIPQP 94

Query: 103 TTFAWN 86
            +F WN
Sbjct: 95  NSFTWN 100


>ref|XP_004241167.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Solanum lycopersicum]
          Length = 744

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 27/66 (40%), Positives = 39/66 (59%)
 Frame = -3

Query: 283 LLFLQSCSSIRQLLQIHAHMLRRRFLDDPFATTELLRSSLAFPFAGTLYARKLLAQIPHP 104
           +L +    SI QL QIHA+MLR     DPF+ ++L+ +S    F+   YA K+  +IP P
Sbjct: 39  VLLIDKSQSINQLKQIHAYMLRIGLFFDPFSASKLIEASSLSHFSSLDYAHKVFDEIPQP 98

Query: 103 TTFAWN 86
             F+WN
Sbjct: 99  NLFSWN 104


>ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
           gi|449470513|ref|XP_004152961.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
           gi|449523079|ref|XP_004168552.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 733

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/63 (41%), Positives = 36/63 (57%)
 Frame = -3

Query: 274 LQSCSSIRQLLQIHAHMLRRRFLDDPFATTELLRSSLAFPFAGTLYARKLLAQIPHPTTF 95
           +  CSS +QL ++HA MLR     DPF+ ++L  +S    F+   YAR L  QIP P  +
Sbjct: 32  IDKCSSSKQLKEVHARMLRTGLFFDPFSASKLFTASALSSFSTLDYARNLFDQIPQPNLY 91

Query: 94  AWN 86
            WN
Sbjct: 92  TWN 94


>ref|XP_004295750.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 1049

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 22/66 (33%), Positives = 39/66 (59%)
 Frame = -3

Query: 283 LLFLQSCSSIRQLLQIHAHMLRRRFLDDPFATTELLRSSLAFPFAGTLYARKLLAQIPHP 104
           L  +  C+++  L Q+HA ML+     DP++ ++L+ ++   PF+   YAR++  +IP P
Sbjct: 90  LPLIDQCTTLNHLKQVHAQMLKTSLFFDPYSASKLITAAALSPFSSLDYARQVFDEIPEP 149

Query: 103 TTFAWN 86
             F WN
Sbjct: 150 NLFTWN 155


>ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like isoform X1 [Glycine max]
          Length = 780

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/70 (35%), Positives = 39/70 (55%)
 Frame = -3

Query: 295 AASCLLFLQSCSSIRQLLQIHAHMLRRRFLDDPFATTELLRSSLAFPFAGTLYARKLLAQ 116
           + + L F+  C++  QL QIHAHMLR     DP+  ++LL +      +  +YA+ +  Q
Sbjct: 72  STNILEFIDQCTNTMQLKQIHAHMLRTSRFCDPYTASKLLTAYAISSCSCLIYAKNVFNQ 131

Query: 115 IPHPTTFAWN 86
           IP P  + WN
Sbjct: 132 IPQPNLYCWN 141