BLASTX nr result

ID: Zingiber23_contig00045502 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00045502
         (253 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006480598.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-...    55   7e-06
ref|XP_006428880.1| hypothetical protein CICLE_v10010897mg [Citr...    55   7e-06
ref|XP_006428879.1| hypothetical protein CICLE_v10010897mg [Citr...    55   7e-06

>ref|XP_006480598.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-like isoform X1 [Citrus
           sinensis] gi|568853949|ref|XP_006480599.1| PREDICTED: E3
           ubiquitin-protein ligase UPL4-like isoform X2 [Citrus
           sinensis]
          Length = 1523

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
 Frame = +2

Query: 50  VLALAADGSEESAQLATLTELCEVLS-AMEYATQGYRLKALVQPLVNLASKDGNPKILLQ 226
           +LA  ++ ++ S Q+ +LTELCEVLS AME +       +L   LV LA  + NP I+L 
Sbjct: 109 ILACLSEDTDPSRQITSLTELCEVLSFAMEDSLSSMMADSLSPVLVKLARHETNPDIMLL 168

Query: 227 AVRALTYL 250
           AVRA+TYL
Sbjct: 169 AVRAITYL 176


>ref|XP_006428880.1| hypothetical protein CICLE_v10010897mg [Citrus clementina]
           gi|567872583|ref|XP_006428881.1| hypothetical protein
           CICLE_v10010897mg [Citrus clementina]
           gi|557530937|gb|ESR42120.1| hypothetical protein
           CICLE_v10010897mg [Citrus clementina]
           gi|557530938|gb|ESR42121.1| hypothetical protein
           CICLE_v10010897mg [Citrus clementina]
          Length = 1523

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
 Frame = +2

Query: 50  VLALAADGSEESAQLATLTELCEVLS-AMEYATQGYRLKALVQPLVNLASKDGNPKILLQ 226
           +LA  ++ ++ S Q+ +LTELCEVLS AME +       +L   LV LA  + NP I+L 
Sbjct: 109 ILACLSEDTDPSRQITSLTELCEVLSFAMEDSLSSMMADSLSPVLVKLARHETNPDIMLL 168

Query: 227 AVRALTYL 250
           AVRA+TYL
Sbjct: 169 AVRAITYL 176


>ref|XP_006428879.1| hypothetical protein CICLE_v10010897mg [Citrus clementina]
           gi|557530936|gb|ESR42119.1| hypothetical protein
           CICLE_v10010897mg [Citrus clementina]
          Length = 1463

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
 Frame = +2

Query: 50  VLALAADGSEESAQLATLTELCEVLS-AMEYATQGYRLKALVQPLVNLASKDGNPKILLQ 226
           +LA  ++ ++ S Q+ +LTELCEVLS AME +       +L   LV LA  + NP I+L 
Sbjct: 109 ILACLSEDTDPSRQITSLTELCEVLSFAMEDSLSSMMADSLSPVLVKLARHETNPDIMLL 168

Query: 227 AVRALTYL 250
           AVRA+TYL
Sbjct: 169 AVRAITYL 176


Top