BLASTX nr result

ID: Zingiber23_contig00044849 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00044849
         (251 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOX96845.1| Zinc finger family protein isoform 1 [Theobroma c...    58   1e-06
gb|EOX96847.1| Zinc finger family protein isoform 3, partial [Th...    57   3e-06
gb|EOX96846.1| Zinc finger family protein isoform 2 [Theobroma c...    57   3e-06

>gb|EOX96845.1| Zinc finger family protein isoform 1 [Theobroma cacao]
          Length = 386

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 34/80 (42%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
 Frame = -1

Query: 239 PLQAGPPGLPTSIPAM-VSQPLFPINNPAGVPSQSSPFLAXXXXXXXXXXXXXXSGAVDA 63
           P Q  PPGLPTS P + VSQPLFP+ N   VP+QSSPF                 G+++ 
Sbjct: 205 PSQIAPPGLPTSTPPLPVSQPLFPVVN-NNVPTQSSPFSTSLPTSVQPSTTAEVKGSIEV 263

Query: 62  NSTSNTSTGGGYVTPNDPDG 3
           +S+ NTS  G Y   N   G
Sbjct: 264 HSSVNTSVPGSYHAANISGG 283


>gb|EOX96847.1| Zinc finger family protein isoform 3, partial [Theobroma cacao]
          Length = 348

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 32/71 (45%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
 Frame = -1

Query: 239 PLQAGPPGLPTSIPAM-VSQPLFPINNPAGVPSQSSPFLAXXXXXXXXXXXXXXSGAVDA 63
           P Q  PPGLPTS P + VSQPLFP+ N   VP+QSSPF                 G+++ 
Sbjct: 203 PSQIAPPGLPTSTPPLPVSQPLFPVVN-NNVPTQSSPFSTSLPTSVQPSTTAEVKGSIEV 261

Query: 62  NSTSNTSTGGG 30
           +S+ NTS  GG
Sbjct: 262 HSSVNTSVPGG 272


>gb|EOX96846.1| Zinc finger family protein isoform 2 [Theobroma cacao]
          Length = 365

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 32/71 (45%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
 Frame = -1

Query: 239 PLQAGPPGLPTSIPAM-VSQPLFPINNPAGVPSQSSPFLAXXXXXXXXXXXXXXSGAVDA 63
           P Q  PPGLPTS P + VSQPLFP+ N   VP+QSSPF                 G+++ 
Sbjct: 205 PSQIAPPGLPTSTPPLPVSQPLFPVVN-NNVPTQSSPFSTSLPTSVQPSTTAEVKGSIEV 263

Query: 62  NSTSNTSTGGG 30
           +S+ NTS  GG
Sbjct: 264 HSSVNTSVPGG 274


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