BLASTX nr result
ID: Zingiber23_contig00044464
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00044464
(306 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAD61010.1| ribosomal protein S2 [Hordeum vulgare subsp. vul... 59 5e-07
gb|AHI16396.1| rps2 (mitochondrion) [Triticum durum] 59 9e-07
gb|AHI16366.1| rps2 (mitochondrion) [Triticum durum] 59 9e-07
ref|YP_008757354.1| ribosomal protein small subunit 2 (mitochond... 59 9e-07
gb|EMT29035.1| Ribosomal protein S2, mitochondrial [Aegilops tau... 59 9e-07
gb|EMT09792.1| hypothetical protein F775_26544 [Aegilops tauschii] 59 9e-07
gb|EMS45496.1| Ribosomal protein S2, mitochondrial [Triticum ura... 59 9e-07
ref|YP_398416.1| rps2 [Triticum aestivum] gi|78675256|dbj|BAE476... 59 9e-07
gb|ADE08092.1| rps2 [Triticum aestivum] gi|578888245|gb|AHI16350... 59 9e-07
emb|CAA74226.1| ribosomal protein S2 [Triticum aestivum] 59 9e-07
ref|YP_762330.1| ribosomal protein S2 [Sorghum bicolor] gi|11430... 57 3e-06
ref|YP_005090383.1| ribosomal protein S2 (mitochondrion) [Phoeni... 56 4e-06
ref|YP_008758150.1| ribosomal protein small subunit 2 (mitochond... 55 1e-05
>dbj|BAD61010.1| ribosomal protein S2 [Hordeum vulgare subsp. vulgare]
Length = 562
Score = 59.3 bits (142), Expect = 5e-07
Identities = 28/43 (65%), Positives = 33/43 (76%)
Frame = +1
Query: 4 PSRPYKIITYAIPANDPILYIYLFRHSITKTVILKHHGMSFES 132
P YK ITY IPANDPI ++YLFRHSI KTVILK + +S E+
Sbjct: 170 PWESYKRITYPIPANDPIQFVYLFRHSIMKTVILKQNAISRET 212
>gb|AHI16396.1| rps2 (mitochondrion) [Triticum durum]
Length = 360
Score = 58.5 bits (140), Expect = 9e-07
Identities = 28/45 (62%), Positives = 34/45 (75%)
Frame = +1
Query: 4 PSRPYKIITYAIPANDPILYIYLFRHSITKTVILKHHGMSFESLS 138
P YK ITY IPANDPI ++YLFRHSI KTVIL+ + +S E+ S
Sbjct: 170 PWESYKRITYPIPANDPIQFVYLFRHSIMKTVILEQNAISREAQS 214
>gb|AHI16366.1| rps2 (mitochondrion) [Triticum durum]
Length = 360
Score = 58.5 bits (140), Expect = 9e-07
Identities = 28/45 (62%), Positives = 34/45 (75%)
Frame = +1
Query: 4 PSRPYKIITYAIPANDPILYIYLFRHSITKTVILKHHGMSFESLS 138
P YK ITY IPANDPI ++YLFRHSI KTVIL+ + +S E+ S
Sbjct: 170 PWESYKRITYPIPANDPIQFVYLFRHSIMKTVILEQNAISREAQS 214
>ref|YP_008757354.1| ribosomal protein small subunit 2 (mitochondrion) [Aegilops
speltoides] gi|549067761|dbj|BAN94732.1| ribosomal
protein small subunit 2 (mitochondrion) [Aegilops
speltoides]
Length = 360
Score = 58.5 bits (140), Expect = 9e-07
Identities = 28/45 (62%), Positives = 34/45 (75%)
Frame = +1
Query: 4 PSRPYKIITYAIPANDPILYIYLFRHSITKTVILKHHGMSFESLS 138
P YK ITY IPANDPI ++YLFRHSI KTVIL+ + +S E+ S
Sbjct: 170 PWESYKRITYPIPANDPIQFVYLFRHSIMKTVILEQNAISREAQS 214
>gb|EMT29035.1| Ribosomal protein S2, mitochondrial [Aegilops tauschii]
Length = 267
Score = 58.5 bits (140), Expect = 9e-07
Identities = 28/45 (62%), Positives = 34/45 (75%)
Frame = +1
Query: 4 PSRPYKIITYAIPANDPILYIYLFRHSITKTVILKHHGMSFESLS 138
P YK ITY IPANDPI ++YLFRHSI KTVIL+ + +S E+ S
Sbjct: 87 PWESYKRITYPIPANDPIQFVYLFRHSIMKTVILEQNAISREAQS 131
>gb|EMT09792.1| hypothetical protein F775_26544 [Aegilops tauschii]
Length = 279
Score = 58.5 bits (140), Expect = 9e-07
Identities = 28/45 (62%), Positives = 34/45 (75%)
Frame = +1
Query: 4 PSRPYKIITYAIPANDPILYIYLFRHSITKTVILKHHGMSFESLS 138
P YK ITY IPANDPI ++YLFRHSI KTVIL+ + +S E+ S
Sbjct: 90 PWESYKRITYPIPANDPIQFVYLFRHSIMKTVILEQNAISREAQS 134
>gb|EMS45496.1| Ribosomal protein S2, mitochondrial [Triticum urartu]
Length = 262
Score = 58.5 bits (140), Expect = 9e-07
Identities = 28/45 (62%), Positives = 34/45 (75%)
Frame = +1
Query: 4 PSRPYKIITYAIPANDPILYIYLFRHSITKTVILKHHGMSFESLS 138
P YK ITY IPANDPI ++YLFRHSI KTVIL+ + +S E+ S
Sbjct: 72 PWESYKRITYPIPANDPIQFVYLFRHSIMKTVILEQNAISREAQS 116
>ref|YP_398416.1| rps2 [Triticum aestivum] gi|78675256|dbj|BAE47681.1| rps2 [Triticum
aestivum] gi|169649065|gb|ACA62626.1| rps2 [Triticum
aestivum]
Length = 360
Score = 58.5 bits (140), Expect = 9e-07
Identities = 28/45 (62%), Positives = 34/45 (75%)
Frame = +1
Query: 4 PSRPYKIITYAIPANDPILYIYLFRHSITKTVILKHHGMSFESLS 138
P YK ITY IPANDPI ++YLFRHSI KTVIL+ + +S E+ S
Sbjct: 170 PWESYKRITYPIPANDPIQFVYLFRHSIMKTVILEQNAISREAQS 214
>gb|ADE08092.1| rps2 [Triticum aestivum] gi|578888245|gb|AHI16350.1| rps2
(mitochondrion) [Aegilops longissima]
Length = 360
Score = 58.5 bits (140), Expect = 9e-07
Identities = 28/45 (62%), Positives = 34/45 (75%)
Frame = +1
Query: 4 PSRPYKIITYAIPANDPILYIYLFRHSITKTVILKHHGMSFESLS 138
P YK ITY IPANDPI ++YLFRHSI KTVIL+ + +S E+ S
Sbjct: 170 PWESYKRITYPIPANDPIQFVYLFRHSIMKTVILEQNAISREAQS 214
>emb|CAA74226.1| ribosomal protein S2 [Triticum aestivum]
Length = 362
Score = 58.5 bits (140), Expect = 9e-07
Identities = 28/45 (62%), Positives = 34/45 (75%)
Frame = +1
Query: 4 PSRPYKIITYAIPANDPILYIYLFRHSITKTVILKHHGMSFESLS 138
P YK ITY IPANDPI ++YLFRHSI KTVIL+ + +S E+ S
Sbjct: 170 PWESYKRITYPIPANDPIQFVYLFRHSIMKTVILEQNAISREAQS 214
>ref|YP_762330.1| ribosomal protein S2 [Sorghum bicolor] gi|114309675|gb|ABI60892.1|
ribosomal protein S2 (mitochondrion) [Sorghum bicolor]
Length = 447
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/35 (74%), Positives = 29/35 (82%)
Frame = +1
Query: 4 PSRPYKIITYAIPANDPILYIYLFRHSITKTVILK 108
P YK I Y IPANDPIL++YLFRHSITKTVIL+
Sbjct: 158 PCEFYKRINYPIPANDPILFVYLFRHSITKTVILE 192
>ref|YP_005090383.1| ribosomal protein S2 (mitochondrion) [Phoenix dactylifera]
gi|343478435|gb|AEM43923.1| ribosomal protein S2
(mitochondrion) [Phoenix dactylifera]
Length = 226
Score = 56.2 bits (134), Expect = 4e-06
Identities = 26/35 (74%), Positives = 29/35 (82%)
Frame = +1
Query: 4 PSRPYKIITYAIPANDPILYIYLFRHSITKTVILK 108
P YK ITY IPANDPI ++YLFRHSITKTVIL+
Sbjct: 158 PLGSYKRITYPIPANDPIQFVYLFRHSITKTVILE 192
>ref|YP_008758150.1| ribosomal protein small subunit 2 (mitochondrion) [Triticum
timopheevii] gi|549067739|dbj|BAN94711.1| ribosomal
protein small subunit 2 (mitochondrion) [Triticum
timopheevii]
Length = 360
Score = 55.1 bits (131), Expect = 1e-05
Identities = 27/45 (60%), Positives = 33/45 (73%)
Frame = +1
Query: 4 PSRPYKIITYAIPANDPILYIYLFRHSITKTVILKHHGMSFESLS 138
P K ITY IPANDPI ++YLFRHSI KTVIL+ + +S E+ S
Sbjct: 170 PWESSKRITYPIPANDPIQFVYLFRHSIMKTVILEQNAISREAQS 214