BLASTX nr result

ID: Zingiber23_contig00044201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00044201
         (782 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMS48956.1| Myb-related protein 3R-1 [Triticum urartu]              59   2e-06
gb|EMT17114.1| Myb-related protein 3R-1 [Aegilops tauschii]            58   4e-06

>gb|EMS48956.1| Myb-related protein 3R-1 [Triticum urartu]
          Length = 1015

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 49/156 (31%), Positives = 74/156 (47%), Gaps = 10/156 (6%)
 Frame = +3

Query: 3   KKISSYLASELLSQFKGLSDAE------SPQLVDRQPQIESDRKETLEIADSLDHCETSS 164
           KKI SY++S LL+Q   L   E      S   + +Q   +SD     E+ DS    ++S 
Sbjct: 221 KKIDSYMSSGLLAQVSRLPLIEHHAHFNSSPAITQQNSEDSDSNAVREVEDSSGCSQSSL 280

Query: 165 ANLVCSQSGELANIAPVDDEMQFDADISGKNFLDSNFGMCMKYYACLEEYTSAVSEARCE 344
           A + CSQ+ +  N+A +  ++  +AD S     DS   MC + Y   E   SA+SE  C 
Sbjct: 281 AMVSCSQAQD-TNLA-LSCDLHVNADPSKTEAHDSQSSMCQEGYTSTEGVASALSEVHCH 338

Query: 345 VSASPI----LMPEEITATNTDEVIAYEFPNNSSVE 440
            S+S      L+ +EI+     ++   E P NS  E
Sbjct: 339 ASSSRFGPDKLLQQEISQRMDLQMDIDETPGNSMFE 374


>gb|EMT17114.1| Myb-related protein 3R-1 [Aegilops tauschii]
          Length = 951

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
 Frame = +3

Query: 3   KKISSYLASELLSQFKGLSDAE------SPQLVDRQPQIESDRKETLEIADSLDHCETSS 164
           KKI SY++S LL+Q   L   E      S   + +Q   +SD     E+ DS    ++S 
Sbjct: 154 KKIDSYMSSGLLAQVSRLPLIEHHAHFNSSPAITQQNSEDSDSNAAREVEDSSGCSQSSL 213

Query: 165 ANLVCSQSGELANIAPVDDEMQFDADISGKNFLDSNFGMCMKYYACLEEYTSAVSEARCE 344
           A + CSQ  +  N+A +  ++  +AD S     DS   MC + Y   E   SA+SE  C 
Sbjct: 214 AMVSCSQVQD-TNLA-LSCDLHVNADTSKTEARDSQSSMCQEDYTSTEGVASALSEVHCH 271

Query: 345 VSASPI----LMPEEITATNTDEVIAYEFPNNSSVE 440
            S+S      L+ ++I+     ++   E P NS  E
Sbjct: 272 ASSSRFGPDKLLQQDISQRMNLQMDIDETPGNSMFE 307


Top