BLASTX nr result

ID: Zingiber23_contig00044092 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00044092
         (507 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306794.1| hypothetical protein POPTR_0005s23600g [Popu...    58   1e-06
ref|XP_002517073.1| conserved hypothetical protein [Ricinus comm...    58   1e-06

>ref|XP_002306794.1| hypothetical protein POPTR_0005s23600g [Populus trichocarpa]
           gi|222856243|gb|EEE93790.1| hypothetical protein
           POPTR_0005s23600g [Populus trichocarpa]
          Length = 375

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 40/112 (35%), Positives = 53/112 (47%), Gaps = 2/112 (1%)
 Frame = +1

Query: 160 RETEPDGGTRRNASLKRYLEKRKDRFKGKKVIEGPSYSCTEKMLLSENFRCPNPIDFSDL 339
           RE   +G T R ASL+RY EK+KDRFK K+ +  PS S    + LS      + I     
Sbjct: 256 REDNLEGSTSRKASLQRYFEKKKDRFKNKRKVAVPSASL--DVFLSH--LVGDQISNDHW 311

Query: 340 NMTSLSPTTQHQAPHSPASC--AENQVRKDKFLIDLNADGDEDC*TCLAFCS 489
           N+      +Q + P +P  C   +N  +      DLN  GD D   CL F S
Sbjct: 312 NLNDACSPSQPRPPQTPNRCNSVDNVAKNGILKADLNNKGDADLSCCLDFSS 363


>ref|XP_002517073.1| conserved hypothetical protein [Ricinus communis]
           gi|223543708|gb|EEF45236.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 335

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 37/97 (38%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
 Frame = +1

Query: 175 DGGTRRNASLKRYLEKRKDR--FKGKKVIEGPSYSCTEKMLLSENFRCPNPIDFSDLNMT 348
           +G   R  SL+RYLEK+KDR  FKG+K + GP+ S  +  L   N +    I       +
Sbjct: 242 EGQANRKMSLQRYLEKKKDRGRFKGRKNL-GPNSSSLDAYL---NHQMRTHISNEQSTRS 297

Query: 349 SLSPTTQHQAPHSPASCAENQVRKDKFLIDLNADGDE 459
           S S  TQ   PH+ ++ AE+Q++   F +DLN D  E
Sbjct: 298 STSSPTQPGVPHTSSNSAEDQLKTASFAVDLNEDVQE 334


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