BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00044018
         (423 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   120   1e-25
ref|XP_006430989.1| hypothetical protein CICLE_v10010966mg [Citr...   120   1e-25
ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citr...   120   1e-25
ref|XP_006430987.1| hypothetical protein CICLE_v10010966mg [Citr...   120   1e-25
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi...   120   1e-25
ref|XP_006338320.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   120   2e-25
sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymeras...   120   2e-25
emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]         120   2e-25
ref|XP_004232127.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   119   3e-25
emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris]   119   4e-25
ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mi...   119   4e-25
sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymeras...   119   4e-25
ref|XP_003577161.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   119   5e-25
ref|XP_004239009.1| PREDICTED: DNA-directed RNA polymerase 1, mi...   118   9e-25
gb|AAF32492.1|AF091838_1 single-subunit RNA polymerase G [Tritic...   117   1e-24
gb|EMT11393.1| DNA-directed RNA polymerase 2, chloroplastic/mito...   117   2e-24
emb|CAE52834.1| RNA polymerase [Hordeum vulgare]                      116   3e-24
gb|EOY01555.1| DNA-directed RNA polymerase isoform 3 [Theobroma ...   115   5e-24
gb|EOY01553.1| DNA-directed RNA polymerase isoform 1 [Theobroma ...   115   5e-24
ref|XP_002315996.2| DNA-directed RNA polymerase family protein [...   115   6e-24

>ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial-like [Citrus sinensis]
          Length = 1026

 Score =  120 bits (302), Expect = 1e-25
 Identities = 61/109 (55%), Positives = 71/109 (65%), Gaps = 1/109 (0%)
 Frame = +3

Query: 99  NHPREIEGTDSAKYAALHQRQIKLETDAWEAAAXXXXXXXXXXXXXXXAPNLPYVKSLFL 278
           N  R   G  S KY  L  RQ+K+ET+AWE AA               APNLPY+KSLFL
Sbjct: 172 NRRRVARGMGSGKYRMLKMRQVKIETEAWEKAANEYRELLMDMCEQKLAPNLPYMKSLFL 231

Query: 279 DWFEPFRDQIAAEQERCK-GQTKLPYAPFFNLLPADMMAIITMHKLMSL 422
            WFEP RD IA EQERC+  + K+ YAP+F+ LPADMMA+ITMHKLM L
Sbjct: 232 GWFEPLRDAIAKEQERCRMAKHKVAYAPYFDQLPADMMAVITMHKLMGL 280


>ref|XP_006430989.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
           gi|557533046|gb|ESR44229.1| hypothetical protein
           CICLE_v10010966mg [Citrus clementina]
          Length = 928

 Score =  120 bits (302), Expect = 1e-25
 Identities = 61/109 (55%), Positives = 71/109 (65%), Gaps = 1/109 (0%)
 Frame = +3

Query: 99  NHPREIEGTDSAKYAALHQRQIKLETDAWEAAAXXXXXXXXXXXXXXXAPNLPYVKSLFL 278
           N  R   G  S KY  L  RQ+K+ET+AWE AA               APNLPY+KSLFL
Sbjct: 176 NRRRVARGMGSGKYRMLKMRQVKIETEAWEQAANEYRELLMDMCEQKLAPNLPYMKSLFL 235

Query: 279 DWFEPFRDQIAAEQERCK-GQTKLPYAPFFNLLPADMMAIITMHKLMSL 422
            WFEP RD IA EQERC+  + K+ YAP+F+ LPADMMA+ITMHKLM L
Sbjct: 236 GWFEPLRDAIAKEQERCRMAKHKVAYAPYFDQLPADMMAVITMHKLMGL 284


>ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
           gi|557533045|gb|ESR44228.1| hypothetical protein
           CICLE_v10010966mg [Citrus clementina]
          Length = 1030

 Score =  120 bits (302), Expect = 1e-25
 Identities = 61/109 (55%), Positives = 71/109 (65%), Gaps = 1/109 (0%)
 Frame = +3

Query: 99  NHPREIEGTDSAKYAALHQRQIKLETDAWEAAAXXXXXXXXXXXXXXXAPNLPYVKSLFL 278
           N  R   G  S KY  L  RQ+K+ET+AWE AA               APNLPY+KSLFL
Sbjct: 176 NRRRVARGMGSGKYRMLKMRQVKIETEAWEQAANEYRELLMDMCEQKLAPNLPYMKSLFL 235

Query: 279 DWFEPFRDQIAAEQERCK-GQTKLPYAPFFNLLPADMMAIITMHKLMSL 422
            WFEP RD IA EQERC+  + K+ YAP+F+ LPADMMA+ITMHKLM L
Sbjct: 236 GWFEPLRDAIAKEQERCRMAKHKVAYAPYFDQLPADMMAVITMHKLMGL 284


>ref|XP_006430987.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
           gi|557533044|gb|ESR44227.1| hypothetical protein
           CICLE_v10010966mg [Citrus clementina]
          Length = 933

 Score =  120 bits (302), Expect = 1e-25
 Identities = 61/109 (55%), Positives = 71/109 (65%), Gaps = 1/109 (0%)
 Frame = +3

Query: 99  NHPREIEGTDSAKYAALHQRQIKLETDAWEAAAXXXXXXXXXXXXXXXAPNLPYVKSLFL 278
           N  R   G  S KY  L  RQ+K+ET+AWE AA               APNLPY+KSLFL
Sbjct: 176 NRRRVARGMGSGKYRMLKMRQVKIETEAWEQAANEYRELLMDMCEQKLAPNLPYMKSLFL 235

Query: 279 DWFEPFRDQIAAEQERCK-GQTKLPYAPFFNLLPADMMAIITMHKLMSL 422
            WFEP RD IA EQERC+  + K+ YAP+F+ LPADMMA+ITMHKLM L
Sbjct: 236 GWFEPLRDAIAKEQERCRMAKHKVAYAPYFDQLPADMMAVITMHKLMGL 284


>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
           vinifera]
          Length = 978

 Score =  120 bits (302), Expect = 1e-25
 Identities = 63/128 (49%), Positives = 80/128 (62%), Gaps = 6/128 (4%)
 Frame = +3

Query: 57  GKDKEEGVISEIKLN-----HPREIEGTDSAKYAALHQRQIKLETDAWEAAAXXXXXXXX 221
           G D+ + ++ E+         P+ I G    K+  L +RQIK+ET+AWE AA        
Sbjct: 108 GVDEVQELVEEVNKGDKLEKQPKLIGGVAQGKHNVLRRRQIKMETEAWEEAAKEYRELLS 167

Query: 222 XXXXXXXAPNLPYVKSLFLDWFEPFRDQIAAEQERCK-GQTKLPYAPFFNLLPADMMAII 398
                  APNLPY+KSLFL WFEP RD IAAEQ+ CK G+ +  YAP+F+ LPADMMA+I
Sbjct: 168 DMCEQKLAPNLPYIKSLFLGWFEPLRDVIAAEQDLCKQGKNRAAYAPYFDHLPADMMAVI 227

Query: 399 TMHKLMSL 422
           TMHKLM L
Sbjct: 228 TMHKLMGL 235


>ref|XP_006338320.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial-like [Solanum tuberosum]
          Length = 1019

 Score =  120 bits (300), Expect = 2e-25
 Identities = 60/102 (58%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
 Frame = +3

Query: 120 GTDSAKYAALHQRQIKLETDAWEAAAXXXXXXXXXXXXXXXAPNLPYVKSLFLDWFEPFR 299
           G D  KY AL +RQ+K+ET AWE AA               APNLPYVKSLFL WFEP R
Sbjct: 175 GIDRRKYPALKRRQVKIETQAWELAAKEYRELLFDMCEQKLAPNLPYVKSLFLGWFEPLR 234

Query: 300 DQIAAEQERC-KGQTKLPYAPFFNLLPADMMAIITMHKLMSL 422
           D+IA EQE C +G++K  Y+ +F+LLPADMMA+ITMHKLM L
Sbjct: 235 DKIAQEQELCIQGKSKAAYSKYFHLLPADMMAVITMHKLMGL 276


>sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymerase 1B, mitochondrial;
           AltName: Full=NictaRpoT1-tom; AltName: Full=T7
           bacteriophage-type single subunit RNA polymerase 1B;
           Flags: Precursor
          Length = 1002

 Score =  120 bits (300), Expect = 2e-25
 Identities = 64/122 (52%), Positives = 80/122 (65%), Gaps = 2/122 (1%)
 Frame = +3

Query: 63  DKE-EGVISEIKLNHPREIEGTDSAKYAALHQRQIKLETDAWEAAAXXXXXXXXXXXXXX 239
           DKE E + + ++   P+ I G    KY  L +RQIK+ET+AWE AA              
Sbjct: 140 DKENEALKANLQPKQPKTIGGMGVGKYNFLRRRQIKVETEAWEEAAKEYQELLMDMCEQK 199

Query: 240 XAPNLPYVKSLFLDWFEPFRDQIAAEQERC-KGQTKLPYAPFFNLLPADMMAIITMHKLM 416
            APNLPY+KSLFL WFEP RD IAAEQ+ C +G+ +  YAPFF+ LPA+MMA+ITMHKLM
Sbjct: 200 LAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPAEMMAVITMHKLM 259

Query: 417 SL 422
            L
Sbjct: 260 GL 261


>emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]
          Length = 1002

 Score =  120 bits (300), Expect = 2e-25
 Identities = 64/122 (52%), Positives = 80/122 (65%), Gaps = 2/122 (1%)
 Frame = +3

Query: 63  DKE-EGVISEIKLNHPREIEGTDSAKYAALHQRQIKLETDAWEAAAXXXXXXXXXXXXXX 239
           DKE E + + ++   P+ I G    KY  L +RQIK+ET+AWE AA              
Sbjct: 140 DKENEALKANLQPKQPKTIGGMGVGKYNFLRRRQIKVETEAWEEAAKEYQELLMDMCEQK 199

Query: 240 XAPNLPYVKSLFLDWFEPFRDQIAAEQERC-KGQTKLPYAPFFNLLPADMMAIITMHKLM 416
            APNLPY+KSLFL WFEP RD IAAEQ+ C +G+ +  YAPFF+ LPA+MMA+ITMHKLM
Sbjct: 200 LAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPAEMMAVITMHKLM 259

Query: 417 SL 422
            L
Sbjct: 260 GL 261


>ref|XP_004232127.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial-like [Solanum lycopersicum]
          Length = 1022

 Score =  119 bits (299), Expect = 3e-25
 Identities = 60/102 (58%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
 Frame = +3

Query: 120 GTDSAKYAALHQRQIKLETDAWEAAAXXXXXXXXXXXXXXXAPNLPYVKSLFLDWFEPFR 299
           G D  KY AL +RQ+K+ET AWE AA               APNLPYVKSLFL WFEP R
Sbjct: 178 GIDRRKYPALMRRQVKIETQAWEQAAKEYRELLFDMCEQKLAPNLPYVKSLFLGWFEPLR 237

Query: 300 DQIAAEQERC-KGQTKLPYAPFFNLLPADMMAIITMHKLMSL 422
           D+IA EQE C +G++K  Y+ +F+LLPADMMA+ITMHKLM L
Sbjct: 238 DKIAQEQELCIQGKSKAAYSKYFHLLPADMMAVITMHKLMGL 279


>emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris]
          Length = 1002

 Score =  119 bits (298), Expect = 4e-25
 Identities = 61/120 (50%), Positives = 78/120 (65%), Gaps = 1/120 (0%)
 Frame = +3

Query: 66  KEEGVISEIKLNHPREIEGTDSAKYAALHQRQIKLETDAWEAAAXXXXXXXXXXXXXXXA 245
           + E + + ++   P+ I G    KY  L +RQIK+ET+AWE AA               A
Sbjct: 142 ENEALKTNLQPKQPKTIGGMGVGKYNLLRRRQIKVETEAWEEAAKEYQELLMDMCEQKLA 201

Query: 246 PNLPYVKSLFLDWFEPFRDQIAAEQERC-KGQTKLPYAPFFNLLPADMMAIITMHKLMSL 422
           PNLPY+KSLFL WFEP RD IAAEQ+ C +G+ +  YAPFF+ LPA+MMA+ITMHKLM L
Sbjct: 202 PNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGL 261


>ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like
           [Solanum tuberosum]
          Length = 993

 Score =  119 bits (298), Expect = 4e-25
 Identities = 60/120 (50%), Positives = 78/120 (65%), Gaps = 1/120 (0%)
 Frame = +3

Query: 66  KEEGVISEIKLNHPREIEGTDSAKYAALHQRQIKLETDAWEAAAXXXXXXXXXXXXXXXA 245
           + E + + ++   P+ + G    KY  L +RQIK+ET+AWE AA               A
Sbjct: 134 ENEALKTNLQPKQPKTVGGMGIGKYNLLRRRQIKVETEAWEDAAKEYQELLMDMCEQKLA 193

Query: 246 PNLPYVKSLFLDWFEPFRDQIAAEQERC-KGQTKLPYAPFFNLLPADMMAIITMHKLMSL 422
           PNLPY+KSLFL WFEP RD IAAEQ+ C +G+ +  YAPFF+ LPA+MMA+ITMHKLM L
Sbjct: 194 PNLPYIKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGL 253


>sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymerase 1, mitochondrial;
           AltName: Full=NsRpoT-A; AltName: Full=T7
           bacteriophage-type single subunit RNA polymerase 1;
           Flags: Precursor gi|15824083|dbj|BAB69431.1| T7
           bacteriophage-type single subunit RNA polymerase
           [Nicotiana sylvestris]
          Length = 1002

 Score =  119 bits (298), Expect = 4e-25
 Identities = 61/120 (50%), Positives = 78/120 (65%), Gaps = 1/120 (0%)
 Frame = +3

Query: 66  KEEGVISEIKLNHPREIEGTDSAKYAALHQRQIKLETDAWEAAAXXXXXXXXXXXXXXXA 245
           + E + + ++   P+ I G    KY  L +RQIK+ET+AWE AA               A
Sbjct: 142 ENEALKTNLQPKQPKTIGGMGVGKYNLLRRRQIKVETEAWEEAAKEYQELLMDMCEQKLA 201

Query: 246 PNLPYVKSLFLDWFEPFRDQIAAEQERC-KGQTKLPYAPFFNLLPADMMAIITMHKLMSL 422
           PNLPY+KSLFL WFEP RD IAAEQ+ C +G+ +  YAPFF+ LPA+MMA+ITMHKLM L
Sbjct: 202 PNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGL 261


>ref|XP_003577161.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial-like [Brachypodium
           distachyon]
          Length = 992

 Score =  119 bits (297), Expect = 5e-25
 Identities = 60/102 (58%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
 Frame = +3

Query: 120 GTDSAKYAALHQRQIKLETDAWEAAAXXXXXXXXXXXXXXXAPNLPYVKSLFLDWFEPFR 299
           G  S+KYAAL QRQ+++ET+AWE AA               APNLPYVKSLFL WFEP R
Sbjct: 146 GMGSSKYAALRQRQVRIETEAWEQAAKEYRELLADMCEHKLAPNLPYVKSLFLGWFEPLR 205

Query: 300 DQIAAEQERC-KGQTKLPYAPFFNLLPADMMAIITMHKLMSL 422
           DQI AEQE   +   +  +AP+FN+LPADMMA+ITMHKLM L
Sbjct: 206 DQIIAEQELVGERGARASHAPYFNMLPADMMAVITMHKLMGL 247


>ref|XP_004239009.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like
           [Solanum lycopersicum]
          Length = 993

 Score =  118 bits (295), Expect = 9e-25
 Identities = 59/120 (49%), Positives = 78/120 (65%), Gaps = 1/120 (0%)
 Frame = +3

Query: 66  KEEGVISEIKLNHPREIEGTDSAKYAALHQRQIKLETDAWEAAAXXXXXXXXXXXXXXXA 245
           + E + + ++   P+ + G    KY  L +RQIK+ET+AWE AA               A
Sbjct: 134 ENEALKTNLQPKQPKTVGGMGIGKYNLLRRRQIKVETEAWEDAAKEYQELLMDMCEQKLA 193

Query: 246 PNLPYVKSLFLDWFEPFRDQIAAEQERC-KGQTKLPYAPFFNLLPADMMAIITMHKLMSL 422
           PNLPY+KSLFL WFEP +D IAAEQ+ C +G+ +  YAPFF+ LPA+MMA+ITMHKLM L
Sbjct: 194 PNLPYIKSLFLGWFEPLKDAIAAEQKLCDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGL 253


>gb|AAF32492.1|AF091838_1 single-subunit RNA polymerase G [Triticum aestivum]
          Length = 1005

 Score =  117 bits (294), Expect = 1e-24
 Identities = 63/124 (50%), Positives = 80/124 (64%), Gaps = 1/124 (0%)
 Frame = +3

Query: 54  RGKDKEEGVISEIKLNHPREIEGTDSAKYAALHQRQIKLETDAWEAAAXXXXXXXXXXXX 233
           RG+ ++   ++E+   H     G   +KY +L QRQI++ET+AWE AA            
Sbjct: 146 RGQGRQ---LAELAAEH-----GIGYSKYVSLRQRQIRIETEAWEQAAKEYRELLADMCE 197

Query: 234 XXXAPNLPYVKSLFLDWFEPFRDQIAAEQERCKGQ-TKLPYAPFFNLLPADMMAIITMHK 410
              APNLPYVKSLFL WFEP RDQI AEQE    + T+  +AP+FN+LPADMMA+ITMHK
Sbjct: 198 HKLAPNLPYVKSLFLSWFEPLRDQIIAEQELVSERGTRASHAPYFNMLPADMMAVITMHK 257

Query: 411 LMSL 422
           LM L
Sbjct: 258 LMGL 261


>gb|EMT11393.1| DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
           [Aegilops tauschii]
          Length = 884

 Score =  117 bits (293), Expect = 2e-24
 Identities = 63/124 (50%), Positives = 80/124 (64%), Gaps = 1/124 (0%)
 Frame = +3

Query: 54  RGKDKEEGVISEIKLNHPREIEGTDSAKYAALHQRQIKLETDAWEAAAXXXXXXXXXXXX 233
           RG+ ++   ++E+   H     G   +KY +L QRQI++ET+AWE AA            
Sbjct: 71  RGQGRQ---LAELAAEH-----GIGYSKYVSLRQRQIRIETEAWEQAAKEYRELLADMCE 122

Query: 234 XXXAPNLPYVKSLFLDWFEPFRDQIAAEQERCKGQ-TKLPYAPFFNLLPADMMAIITMHK 410
              APNLPYVKSLFL WFEP RDQI AEQE    + T+  +AP+FN+LPADMMA+ITMHK
Sbjct: 123 HKLAPNLPYVKSLFLGWFEPLRDQIIAEQELVSQRGTRASHAPYFNMLPADMMAVITMHK 182

Query: 411 LMSL 422
           LM L
Sbjct: 183 LMGL 186


>emb|CAE52834.1| RNA polymerase [Hordeum vulgare]
          Length = 862

 Score =  116 bits (291), Expect = 3e-24
 Identities = 63/124 (50%), Positives = 80/124 (64%), Gaps = 1/124 (0%)
 Frame = +3

Query: 54  RGKDKEEGVISEIKLNHPREIEGTDSAKYAALHQRQIKLETDAWEAAAXXXXXXXXXXXX 233
           RG+ ++   ++E+   H     G   +KY +L QRQI++ET+AWE AA            
Sbjct: 4   RGQGRQ---LAELAAEH-----GIGYSKYVSLRQRQIRIETEAWEQAAKEYRELLADMCE 55

Query: 234 XXXAPNLPYVKSLFLDWFEPFRDQIAAEQERC-KGQTKLPYAPFFNLLPADMMAIITMHK 410
              APNLPYVKSLFL WFEP RDQI AEQE   +  T+  +AP+FN+LPADMMA+ITMHK
Sbjct: 56  HKLAPNLPYVKSLFLGWFEPLRDQIIAEQELVGERGTRASHAPYFNMLPADMMAVITMHK 115

Query: 411 LMSL 422
           LM L
Sbjct: 116 LMGL 119


>gb|EOY01555.1| DNA-directed RNA polymerase isoform 3 [Theobroma cacao]
          Length = 932

 Score =  115 bits (289), Expect = 5e-24
 Identities = 58/110 (52%), Positives = 71/110 (64%), Gaps = 1/110 (0%)
 Frame = +3

Query: 96  LNHPREI-EGTDSAKYAALHQRQIKLETDAWEAAAXXXXXXXXXXXXXXXAPNLPYVKSL 272
           L  P+++ EG   AKY  L +RQIK+ET+AWE AA               APNLPY+KSL
Sbjct: 136 LVQPKKVAEGMGVAKYNTLKKRQIKIETEAWEEAAKEYQELLMDMCEHKLAPNLPYIKSL 195

Query: 273 FLDWFEPFRDQIAAEQERCKGQTKLPYAPFFNLLPADMMAIITMHKLMSL 422
           FL WFEP RD I  EQE CK   ++ +A +FN L ADMMA++TMHKLM L
Sbjct: 196 FLGWFEPLRDSIVGEQELCKENCRISHAAYFNELSADMMAVVTMHKLMGL 245


>gb|EOY01553.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
           gi|508709657|gb|EOY01554.1| DNA-directed RNA polymerase
           isoform 1 [Theobroma cacao]
          Length = 996

 Score =  115 bits (289), Expect = 5e-24
 Identities = 58/110 (52%), Positives = 71/110 (64%), Gaps = 1/110 (0%)
 Frame = +3

Query: 96  LNHPREI-EGTDSAKYAALHQRQIKLETDAWEAAAXXXXXXXXXXXXXXXAPNLPYVKSL 272
           L  P+++ EG   AKY  L +RQIK+ET+AWE AA               APNLPY+KSL
Sbjct: 136 LVQPKKVAEGMGVAKYNTLKKRQIKIETEAWEEAAKEYQELLMDMCEHKLAPNLPYIKSL 195

Query: 273 FLDWFEPFRDQIAAEQERCKGQTKLPYAPFFNLLPADMMAIITMHKLMSL 422
           FL WFEP RD I  EQE CK   ++ +A +FN L ADMMA++TMHKLM L
Sbjct: 196 FLGWFEPLRDSIVGEQELCKENCRISHAAYFNELSADMMAVVTMHKLMGL 245


>ref|XP_002315996.2| DNA-directed RNA polymerase family protein [Populus trichocarpa]
           gi|550329816|gb|EEF02167.2| DNA-directed RNA polymerase
           family protein [Populus trichocarpa]
          Length = 862

 Score =  115 bits (288), Expect = 6e-24
 Identities = 56/101 (55%), Positives = 66/101 (65%)
 Frame = +3

Query: 120 GTDSAKYAALHQRQIKLETDAWEAAAXXXXXXXXXXXXXXXAPNLPYVKSLFLDWFEPFR 299
           G    KY  L +RQ+K+ET+AWE  A               APNLPYVKSLFL WFEP R
Sbjct: 10  GMGIGKYTILKRRQVKMETEAWEQTAREYQEMLEDMCEQKLAPNLPYVKSLFLGWFEPLR 69

Query: 300 DQIAAEQERCKGQTKLPYAPFFNLLPADMMAIITMHKLMSL 422
           D I AEQE CK  +++P+  +FN LPADMMA+ITMHKLM L
Sbjct: 70  DAILAEQELCKVNSRVPHRAYFNDLPADMMAVITMHKLMGL 110