BLASTX nr result
ID: Zingiber23_contig00042485
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00042485
(392 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB37117.1| Zinc finger CCCH domain-containing protein 19 [Mo... 69 8e-10
gb|EOX97867.1| Nucleic acid binding,zinc ion binding,DNA binding... 59 7e-07
gb|EOX97866.1| Nucleic acid binding,zinc ion binding,DNA binding... 59 7e-07
ref|XP_006423468.1| hypothetical protein CICLE_v100276732mg, par... 59 9e-07
ref|XP_006409811.1| hypothetical protein EUTSA_v10016136mg [Eutr... 59 9e-07
ref|XP_006582460.1| PREDICTED: zinc finger CCCH domain-containin... 58 1e-06
ref|XP_006487367.1| PREDICTED: zinc finger CCCH domain-containin... 58 1e-06
gb|ESW07916.1| hypothetical protein PHAVU_009G003300g [Phaseolus... 56 4e-06
ref|XP_006408927.1| hypothetical protein EUTSA_v10001877mg [Eutr... 56 4e-06
ref|XP_002886231.1| zinc finger (CCCH-type) family protein [Arab... 56 4e-06
ref|XP_004292436.1| PREDICTED: zinc finger CCCH domain-containin... 56 6e-06
>gb|EXB37117.1| Zinc finger CCCH domain-containing protein 19 [Morus notabilis]
Length = 800
Score = 68.6 bits (166), Expect = 8e-10
Identities = 48/153 (31%), Positives = 65/153 (42%), Gaps = 24/153 (15%)
Frame = -2
Query: 388 WGAPQKV-----DDSGWEATMKISPG-------PESGWVPPATGFSNQNENTNSSW---- 257
WG P + + GW A +PG P SGW PP N N N SW
Sbjct: 656 WGVPSQGMVPGNTNQGWGA----APGHGSTHGNPVSGWGPPP-----MNTNANQSWAGHG 706
Query: 256 -GMTLGSKNASWSSAAMYHENVELKKKHGDDKY-------HEGSDSGYSARYTPQHRNNF 101
G G+ N +W++ N ++ H D+Y +G DSGY +++F
Sbjct: 707 QGQAPGNANPAWTAPGGNQGNWGSERSHNTDRYGNQRDMGSQGGDSGYGGGKPWNRQSSF 766
Query: 100 XXXXXXXXXXXXXGLRRVCKFYESGHCRKGASC 2
+RVCKF+ESGHC+KGASC
Sbjct: 767 GSGGSKPPFKG----QRVCKFHESGHCKKGASC 795
>gb|EOX97867.1| Nucleic acid binding,zinc ion binding,DNA binding, putative isoform 2
[Theobroma cacao]
Length = 1800
Score = 58.9 bits (141), Expect = 7e-07
Identities = 48/146 (32%), Positives = 63/146 (43%), Gaps = 17/146 (11%)
Frame = -2
Query: 388 WGAPQKVD-----DSGWEATMKISPGPESGWVPPATGFSNQNENTNSSW-----GMTLGS 239
W AP + +SGW A PG W PP G + N T+S W G T GS
Sbjct: 1658 WAAPGQGQMPGNANSGWTAPGNAIPG----WAPPGQGPAVVN--TSSGWVAPGQGATPGS 1711
Query: 238 KNASWSSAAMYHENVELKKKHGDDKYH-------EGSDSGYSARYTPQHRNNFXXXXXXX 80
N + + + ++ H DK+ +G DSGY P R +
Sbjct: 1712 ANPGYVAPSGNSGMWGNEQNHNGDKFSNQRDRGSQGGDSGYGG-VKPWSRQSLFGSGGGS 1770
Query: 79 XXXXXXGLRRVCKFYESGHCRKGASC 2
G +RVCKF+ESGHC+KGASC
Sbjct: 1771 SRSPFKG-QRVCKFHESGHCKKGASC 1795
>gb|EOX97866.1| Nucleic acid binding,zinc ion binding,DNA binding, putative isoform 1
[Theobroma cacao]
Length = 1825
Score = 58.9 bits (141), Expect = 7e-07
Identities = 48/146 (32%), Positives = 63/146 (43%), Gaps = 17/146 (11%)
Frame = -2
Query: 388 WGAPQKVD-----DSGWEATMKISPGPESGWVPPATGFSNQNENTNSSW-----GMTLGS 239
W AP + +SGW A PG W PP G + N T+S W G T GS
Sbjct: 1683 WAAPGQGQMPGNANSGWTAPGNAIPG----WAPPGQGPAVVN--TSSGWVAPGQGATPGS 1736
Query: 238 KNASWSSAAMYHENVELKKKHGDDKYH-------EGSDSGYSARYTPQHRNNFXXXXXXX 80
N + + + ++ H DK+ +G DSGY P R +
Sbjct: 1737 ANPGYVAPSGNSGMWGNEQNHNGDKFSNQRDRGSQGGDSGYGG-VKPWSRQSLFGSGGGS 1795
Query: 79 XXXXXXGLRRVCKFYESGHCRKGASC 2
G +RVCKF+ESGHC+KGASC
Sbjct: 1796 SRSPFKG-QRVCKFHESGHCKKGASC 1820
>ref|XP_006423468.1| hypothetical protein CICLE_v100276732mg, partial [Citrus clementina]
gi|557525402|gb|ESR36708.1| hypothetical protein
CICLE_v100276732mg, partial [Citrus clementina]
Length = 790
Score = 58.5 bits (140), Expect = 9e-07
Identities = 43/146 (29%), Positives = 57/146 (39%), Gaps = 17/146 (11%)
Frame = -2
Query: 388 WGAPQKVD-----DSGWE--ATMKISPGPESGWVPPATGFSNQNENTN---SSWGMTLGS 239
WGAP + SGW A + GW PP G S N NT G G+
Sbjct: 640 WGAPAQGQAPGNAHSGWAGPAQGQAHKNAVPGWAPPGQGPSPVNANTGWVAPGQGPPPGN 699
Query: 238 KNASWSSAAMYHENVELKKKHGDDKYHE-------GSDSGYSARYTPQHRNNFXXXXXXX 80
N W + A + +G D++ G DSGY + +F
Sbjct: 700 GNPGWGAPAGNPGMWGSDQNNGGDRFSNQRDRGSHGGDSGYGGGRPWNRQPSFGSRGGDS 759
Query: 79 XXXXXXGLRRVCKFYESGHCRKGASC 2
+RVCKF+ESGHC+KG+ C
Sbjct: 760 SRPHFNKGQRVCKFHESGHCKKGSQC 785
>ref|XP_006409811.1| hypothetical protein EUTSA_v10016136mg [Eutrema salsugineum]
gi|557110980|gb|ESQ51264.1| hypothetical protein
EUTSA_v10016136mg [Eutrema salsugineum]
Length = 1564
Score = 58.5 bits (140), Expect = 9e-07
Identities = 44/140 (31%), Positives = 59/140 (42%), Gaps = 10/140 (7%)
Frame = -2
Query: 391 GWGAP-------QKVDDSGWEATMKISPGPE--SGWVPPATGFSNQNENTNSSWGMTLGS 239
GWG P Q ++GW +PG SGW+ TG Q+ N+N +WG +
Sbjct: 1451 GWGGPVQGQPQPQAYSNTGWGQAQVQAPGRATGSGWMQ--TGQGMQSGNSNQNWGTQNQT 1508
Query: 238 KNASWSSAAMYHENVELKKKHGDDKYHEGSDSGYSARYTPQHRNNFXXXXXXXXXXXXXG 59
SW S +H ++ +GY +NNF
Sbjct: 1509 AIPSWGS------------QHNQNR----DSAGYGWNKQSSGQNNFKG------------ 1540
Query: 58 LRRVCKFY-ESGHCRKGASC 2
+RVCKFY E+GHCRKGASC
Sbjct: 1541 -QRVCKFYQENGHCRKGASC 1559
>ref|XP_006582460.1| PREDICTED: zinc finger CCCH domain-containing protein 19-like
[Glycine max]
Length = 1730
Score = 58.2 bits (139), Expect = 1e-06
Identities = 41/138 (29%), Positives = 60/138 (43%), Gaps = 8/138 (5%)
Frame = -2
Query: 391 GWGAPQKVDDSGWEATMKISPGPESGWVPPATGFSNQNENTNSSW-----GMTLGSKNAS 227
GW AP + G + + P GWV P G S+ N N+ W G+ G+ N
Sbjct: 1594 GWAAPSQ----GLPPSQGLPPVNAGGWVGPGQGRSHVN--ANAGWVGPGQGLAPGNANPG 1647
Query: 226 WSSAAMYHENVELKKKHGDDKY-HEGS--DSGYSARYTPQHRNNFXXXXXXXXXXXXXGL 56
W++ ++ H D++ ++G DSGY + + + G
Sbjct: 1648 WAAPTGNPGMWGSEQSHNGDRFPNQGDRRDSGYGGKSWNRQSSFGSGGRGGSSRPPFGGQ 1707
Query: 55 RRVCKFYESGHCRKGASC 2
R VCK+YESG CRKG SC
Sbjct: 1708 RGVCKYYESGRCRKGTSC 1725
>ref|XP_006487367.1| PREDICTED: zinc finger CCCH domain-containing protein 19-like [Citrus
sinensis]
Length = 1782
Score = 58.2 bits (139), Expect = 1e-06
Identities = 43/146 (29%), Positives = 57/146 (39%), Gaps = 17/146 (11%)
Frame = -2
Query: 388 WGAPQKVD-----DSGWE--ATMKISPGPESGWVPPATGFSNQNENTN---SSWGMTLGS 239
WGAP + SGW A + GW PP G S N NT G G+
Sbjct: 1632 WGAPAQGQAPGNAHSGWAGPAQGQAHKNAVPGWAPPGQGPSPINANTGWVAPGQGPPPGN 1691
Query: 238 KNASWSSAAMYHENVELKKKHGDDKYHE-------GSDSGYSARYTPQHRNNFXXXXXXX 80
N W + A + +G D++ G DSGY + +F
Sbjct: 1692 GNPGWGAPAGNPGMWGSDQNNGGDRFSNQRDRGSHGGDSGYGGGRPWNRQPSFGSRGGDS 1751
Query: 79 XXXXXXGLRRVCKFYESGHCRKGASC 2
+RVCKF+ESGHC+KG+ C
Sbjct: 1752 SRPHFNKGQRVCKFHESGHCKKGSQC 1777
>gb|ESW07916.1| hypothetical protein PHAVU_009G003300g [Phaseolus vulgaris]
Length = 1481
Score = 56.2 bits (134), Expect = 4e-06
Identities = 42/140 (30%), Positives = 59/140 (42%), Gaps = 10/140 (7%)
Frame = -2
Query: 391 GWGAPQKVDDSGWEATMKISPGPESGWVPPATGFSNQNENTN---SSWGMTLGSKNASWS 221
GW AP + G + + P GWV P G S+ N N S G+ G+ N W
Sbjct: 1344 GWAAPNQ----GLPPSQGLPPVNAVGWVGPGQGRSHVNVNAGWVGSGQGLAPGNANPVWV 1399
Query: 220 SAAMYHENVELKKKHGDDKYHE-------GSDSGYSARYTPQHRNNFXXXXXXXXXXXXX 62
A ++ H D++ G DSGY + + +++F
Sbjct: 1400 PPAGNPGMWGSEQSHNGDRFPNQGDRGTHGRDSGYGGK-SWNRQSSFGRGAPSRPPFGGQ 1458
Query: 61 GLRRVCKFYESGHCRKGASC 2
R VCK++ESGHCRKG SC
Sbjct: 1459 --RGVCKYHESGHCRKGDSC 1476
>ref|XP_006408927.1| hypothetical protein EUTSA_v10001877mg [Eutrema salsugineum]
gi|557110083|gb|ESQ50380.1| hypothetical protein
EUTSA_v10001877mg [Eutrema salsugineum]
Length = 1603
Score = 56.2 bits (134), Expect = 4e-06
Identities = 42/145 (28%), Positives = 58/145 (40%), Gaps = 16/145 (11%)
Frame = -2
Query: 388 WGAP------QKVDDSGWEATMKISPGPES----GWVPPATGFSNQNENTNSSW-----G 254
W AP Q + + GW +++ P P++ GW A T S W G
Sbjct: 1472 WAAPSVPPTGQGMPNPGWGGSVQAKPQPQAYPNTGWGTVAGQGQAPGSTTGSGWMQPGQG 1531
Query: 253 MTLGSKNASWSSAAMYHENVELKKKHGDDKYHEGSDSGYSARYTPQHRNNFXXXXXXXXX 74
M G+ N +W + +N G+ + GY +NNF
Sbjct: 1532 MQPGNSNQNWGT-----QNQIAIPSWGNQQNQNRDSGGYGWNRQSSGQNNFKG------- 1579
Query: 73 XXXXGLRRVCKFY-ESGHCRKGASC 2
+RVCKFY E+GHCRKGASC
Sbjct: 1580 ------QRVCKFYQENGHCRKGASC 1598
>ref|XP_002886231.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata] gi|297332071|gb|EFH62490.1| zinc finger
(CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 672
Score = 56.2 bits (134), Expect = 4e-06
Identities = 46/150 (30%), Positives = 61/150 (40%), Gaps = 20/150 (13%)
Frame = -2
Query: 391 GWGAP-----QKVDDSGW----------EATMKISPGPES-GWVPPATGFSNQNENTNSS 260
GWG P Q + GW +A ++ G S GW+ P G Q+ N+N +
Sbjct: 542 GWGGPVQGQTQAYPNPGWGAIGHPQAQPQAQVQAQAGTTSAGWMQPGQGI--QSGNSNQN 599
Query: 259 WG---MTLGSKNASWSSAAMYHENVELKKKHGDDKYHEGSDSGYSARYTPQHRNNFXXXX 89
WG T S + A Y G+ + + DSGY +NNF
Sbjct: 600 WGTQNQTAIPSGGSGGNQAGYW---------GNQQQSQNGDSGYGWNRQSSGQNNFKG-- 648
Query: 88 XXXXXXXXXGLRRVCKFY-ESGHCRKGASC 2
+RVCKF+ E GHCRKGASC
Sbjct: 649 -----------QRVCKFFREDGHCRKGASC 667
>ref|XP_004292436.1| PREDICTED: zinc finger CCCH domain-containing protein 19-like
[Fragaria vesca subsp. vesca]
Length = 1642
Score = 55.8 bits (133), Expect = 6e-06
Identities = 38/129 (29%), Positives = 53/129 (41%), Gaps = 10/129 (7%)
Frame = -2
Query: 358 GWEATMKISPGPESG-----WVPPATGFSNQNENTNSSW-----GMTLGSKNASWSSAAM 209
GW A+ GP G W PP G + + N W G LG+ N+ WS+
Sbjct: 1512 GWSAS---GQGPVRGNAVPSWAPPP-GQGPPSVSANPGWAPPGQGPALGNPNSGWSAPTA 1567
Query: 208 YHENVELKKKHGDDKYHEGSDSGYSARYTPQHRNNFXXXXXXXXXXXXXGLRRVCKFYES 29
+ + D+ G DSG+ P +R RVC++YES
Sbjct: 1568 NQTQNGDRFSNQRDRASHGGDSGFGGG-KPWNRQQSFGGGGGGGSSRPPFKGRVCRYYES 1626
Query: 28 GHCRKGASC 2
GHC+KGA+C
Sbjct: 1627 GHCKKGAAC 1635