BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00042271
         (252 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004959895.1| PREDICTED: mediator of RNA polymerase II tra...   120   1e-25
dbj|BAK03112.1| predicted protein [Hordeum vulgare subsp. vulgare]    117   1e-24
dbj|BAK02433.1| predicted protein [Hordeum vulgare subsp. vulgare]    117   1e-24
ref|XP_003562441.1| PREDICTED: uncharacterized protein LOC100826...   112   4e-23
ref|NP_001142911.1| uncharacterized protein LOC100275342 [Zea ma...   112   7e-23
ref|XP_002461223.1| hypothetical protein SORBIDRAFT_02g043150 [S...   111   1e-22
ref|NP_001060654.1| Os07g0681500 [Oryza sativa Japonica Group] g...   109   3e-22
tpg|DAA41777.1| TPA: hypothetical protein ZEAMMB73_504046 [Zea m...   109   3e-22
gb|AFW77567.1| hypothetical protein ZEAMMB73_809718 [Zea mays]        109   3e-22
gb|EEE67830.1| hypothetical protein OsJ_25606 [Oryza sativa Japo...   109   3e-22
gb|EEC82696.1| hypothetical protein OsI_27360 [Oryza sativa Indi...   109   3e-22
ref|XP_004962477.1| PREDICTED: mediator of RNA polymerase II tra...   109   4e-22
ref|XP_004962476.1| PREDICTED: mediator of RNA polymerase II tra...   109   4e-22
ref|XP_004962475.1| PREDICTED: mediator of RNA polymerase II tra...   109   4e-22
ref|XP_002439368.1| hypothetical protein SORBIDRAFT_09g005235 [S...   109   4e-22
tpg|DAA64148.1| TPA: hypothetical protein ZEAMMB73_850292 [Zea m...   108   6e-22
ref|XP_002264843.1| PREDICTED: uncharacterized protein LOC100258...   105   5e-21
gb|EEC78956.1| hypothetical protein OsI_19416 [Oryza sativa Indi...   103   2e-20
gb|EEE63202.1| hypothetical protein OsJ_18012 [Oryza sativa Japo...   103   2e-20
ref|XP_002519970.1| hypothetical protein RCOM_1322820 [Ricinus c...   100   3e-19

>ref|XP_004959895.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           33A-like [Setaria italica]
          Length = 1371

 Score =  120 bits (302), Expect = 1e-25
 Identities = 58/83 (69%), Positives = 68/83 (81%)
 Frame = +2

Query: 2   GDPPLLRAVEAARCFQESGLGIPSTELARVLVSNLCFANNNPSLWKLLDQAMASRVVSPI 181
           GDPPLLRAVE AR     G GIPS +LA +LVSNLCFA+N+PSLWKL+ QAMASR++ P+
Sbjct: 75  GDPPLLRAVELARVVAGEGAGIPSADLAGILVSNLCFAHNSPSLWKLVGQAMASRLLCPL 134

Query: 182 HTIALLMPRVIPCRREQPEAYRL 250
           H +ALL PRV+P RR QPEAYRL
Sbjct: 135 HVLALLTPRVLPQRRAQPEAYRL 157


>dbj|BAK03112.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1119

 Score =  117 bits (294), Expect = 1e-24
 Identities = 58/84 (69%), Positives = 69/84 (82%), Gaps = 1/84 (1%)
 Frame = +2

Query: 2   GDPPLLRAVEAARCFQ-ESGLGIPSTELARVLVSNLCFANNNPSLWKLLDQAMASRVVSP 178
           GDPPLLRAVE AR    E G G+PS +LA +LVSNLCFA+N+PSLWKLLDQAM+SR++ P
Sbjct: 36  GDPPLLRAVEVARLVAGEPGAGLPSADLAGILVSNLCFAHNSPSLWKLLDQAMSSRLLCP 95

Query: 179 IHTIALLMPRVIPCRREQPEAYRL 250
           +H +ALL  RV+P RR QPEAYRL
Sbjct: 96  LHVLALLTARVLPQRRAQPEAYRL 119


>dbj|BAK02433.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1330

 Score =  117 bits (294), Expect = 1e-24
 Identities = 58/84 (69%), Positives = 69/84 (82%), Gaps = 1/84 (1%)
 Frame = +2

Query: 2   GDPPLLRAVEAARCFQ-ESGLGIPSTELARVLVSNLCFANNNPSLWKLLDQAMASRVVSP 178
           GDPPLLRAVE AR    E G G+PS +LA +LVSNLCFA+N+PSLWKLLDQAM+SR++ P
Sbjct: 36  GDPPLLRAVEVARLVAGEPGAGLPSADLAGILVSNLCFAHNSPSLWKLLDQAMSSRLLCP 95

Query: 179 IHTIALLMPRVIPCRREQPEAYRL 250
           +H +ALL  RV+P RR QPEAYRL
Sbjct: 96  LHVLALLTARVLPQRRAQPEAYRL 119


>ref|XP_003562441.1| PREDICTED: uncharacterized protein LOC100826944 isoform 1
           [Brachypodium distachyon]
          Length = 1327

 Score =  112 bits (281), Expect = 4e-23
 Identities = 56/87 (64%), Positives = 68/87 (78%), Gaps = 4/87 (4%)
 Frame = +2

Query: 2   GDPPLLRAVEAARCF----QESGLGIPSTELARVLVSNLCFANNNPSLWKLLDQAMASRV 169
           GDPPLLRAVE AR      +  GLG+PS ELA +LVSNLCFA+N+PSLWKL+ QAMASR+
Sbjct: 31  GDPPLLRAVEVARLVAGEGEGGGLGLPSAELAGILVSNLCFAHNSPSLWKLVSQAMASRL 90

Query: 170 VSPIHTIALLMPRVIPCRREQPEAYRL 250
           + P+H +ALL  RV+P RR  P+AYRL
Sbjct: 91  LCPLHVLALLTARVLPQRRAHPKAYRL 117


>ref|NP_001142911.1| uncharacterized protein LOC100275342 [Zea mays]
           gi|195611326|gb|ACG27493.1| hypothetical protein [Zea
           mays]
          Length = 246

 Score =  112 bits (279), Expect = 7e-23
 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 1/84 (1%)
 Frame = +2

Query: 2   GDPPLLRAVEAARCFQESGLGIPS-TELARVLVSNLCFANNNPSLWKLLDQAMASRVVSP 178
           GDPPLL+A EAARC +E+    P    L++ LV+NLCFA+N  ++WKLLDQAM SR+V P
Sbjct: 22  GDPPLLQAAEAARCIREAPAFTPGGLALSQALVANLCFAHNTAAMWKLLDQAMLSRLVDP 81

Query: 179 IHTIALLMPRVIPCRREQPEAYRL 250
           +HT+ALL PRV+P RREQPEAYRL
Sbjct: 82  LHTLALLTPRVVPNRREQPEAYRL 105


>ref|XP_002461223.1| hypothetical protein SORBIDRAFT_02g043150 [Sorghum bicolor]
           gi|241924600|gb|EER97744.1| hypothetical protein
           SORBIDRAFT_02g043150 [Sorghum bicolor]
          Length = 1306

 Score =  111 bits (277), Expect = 1e-22
 Identities = 55/86 (63%), Positives = 67/86 (77%), Gaps = 3/86 (3%)
 Frame = +2

Query: 2   GDPPLLRAVEAARCFQESGLG---IPSTELARVLVSNLCFANNNPSLWKLLDQAMASRVV 172
           GDPPLLRAVE +R     G G   +PS +LA +LVSNLCFA+N+PSLWKLL QA+A R++
Sbjct: 11  GDPPLLRAVELSRVVAGEGAGAGPLPSADLAGILVSNLCFAHNSPSLWKLLGQAVACRLL 70

Query: 173 SPIHTIALLMPRVIPCRREQPEAYRL 250
            P+H +ALL PRV+P RR QPEAYRL
Sbjct: 71  CPLHVLALLTPRVLPQRRAQPEAYRL 96


>ref|NP_001060654.1| Os07g0681500 [Oryza sativa Japonica Group]
           gi|33146668|dbj|BAC80014.1| unknown protein [Oryza
           sativa Japonica Group] gi|113612190|dbj|BAF22568.1|
           Os07g0681500 [Oryza sativa Japonica Group]
          Length = 1315

 Score =  109 bits (273), Expect = 3e-22
 Identities = 52/83 (62%), Positives = 65/83 (78%)
 Frame = +2

Query: 2   GDPPLLRAVEAARCFQESGLGIPSTELARVLVSNLCFANNNPSLWKLLDQAMASRVVSPI 181
           GD PL+ AVE AR     G G+PS +LA +LVSNLCFA+N+PSLWKL+  A+ASR++ P+
Sbjct: 26  GDQPLVWAVEVARVVAGEGAGLPSADLAGILVSNLCFAHNSPSLWKLVGHAVASRLLCPL 85

Query: 182 HTIALLMPRVIPCRREQPEAYRL 250
           H +ALL PRV+P RR QPEAYRL
Sbjct: 86  HVLALLTPRVLPQRRAQPEAYRL 108


>tpg|DAA41777.1| TPA: hypothetical protein ZEAMMB73_504046 [Zea mays]
          Length = 1290

 Score =  109 bits (273), Expect = 3e-22
 Identities = 55/82 (67%), Positives = 65/82 (79%)
 Frame = +2

Query: 5   DPPLLRAVEAARCFQESGLGIPSTELARVLVSNLCFANNNPSLWKLLDQAMASRVVSPIH 184
           DPPLLRAVE +R   E G G    ELA +LVSNLCFA+N+PSLWKLL QA+ASR++ P+H
Sbjct: 12  DPPLLRAVELSRVVAEEGAG---AELAGILVSNLCFAHNSPSLWKLLGQAVASRLLCPLH 68

Query: 185 TIALLMPRVIPCRREQPEAYRL 250
            +ALL PRV+P RR QPEAYRL
Sbjct: 69  VLALLTPRVLPQRRAQPEAYRL 90


>gb|AFW77567.1| hypothetical protein ZEAMMB73_809718 [Zea mays]
          Length = 166

 Score =  109 bits (273), Expect = 3e-22
 Identities = 53/84 (63%), Positives = 66/84 (78%), Gaps = 1/84 (1%)
 Frame = +2

Query: 2   GDPPLLRAVEAARCFQESGLGIPS-TELARVLVSNLCFANNNPSLWKLLDQAMASRVVSP 178
           GDPPLL+A EAARC +E+    P    L++ LV+NLCFA+N  ++WKLLDQAM SR+V P
Sbjct: 46  GDPPLLQAAEAARCIREAPAFTPGGLALSQALVANLCFAHNTAAMWKLLDQAMLSRLVDP 105

Query: 179 IHTIALLMPRVIPCRREQPEAYRL 250
           +HT+ALL PRV+P RREQPEAY L
Sbjct: 106 LHTLALLTPRVVPNRREQPEAYML 129


>gb|EEE67830.1| hypothetical protein OsJ_25606 [Oryza sativa Japonica Group]
          Length = 1275

 Score =  109 bits (273), Expect = 3e-22
 Identities = 52/83 (62%), Positives = 65/83 (78%)
 Frame = +2

Query: 2   GDPPLLRAVEAARCFQESGLGIPSTELARVLVSNLCFANNNPSLWKLLDQAMASRVVSPI 181
           GD PL+ AVE AR     G G+PS +LA +LVSNLCFA+N+PSLWKL+  A+ASR++ P+
Sbjct: 26  GDQPLVWAVEVARVVAGEGAGLPSADLAGILVSNLCFAHNSPSLWKLVGHAVASRLLCPL 85

Query: 182 HTIALLMPRVIPCRREQPEAYRL 250
           H +ALL PRV+P RR QPEAYRL
Sbjct: 86  HVLALLTPRVLPQRRAQPEAYRL 108


>gb|EEC82696.1| hypothetical protein OsI_27360 [Oryza sativa Indica Group]
          Length = 1361

 Score =  109 bits (273), Expect = 3e-22
 Identities = 52/83 (62%), Positives = 65/83 (78%)
 Frame = +2

Query: 2   GDPPLLRAVEAARCFQESGLGIPSTELARVLVSNLCFANNNPSLWKLLDQAMASRVVSPI 181
           GD PL+ AVE AR     G G+PS +LA +LVSNLCFA+N+PSLWKL+  A+ASR++ P+
Sbjct: 26  GDQPLVWAVEVARVVAGEGAGLPSADLAGILVSNLCFAHNSPSLWKLVGHAVASRLLCPL 85

Query: 182 HTIALLMPRVIPCRREQPEAYRL 250
           H +ALL PRV+P RR QPEAYRL
Sbjct: 86  HVLALLTPRVLPQRRAQPEAYRL 108


>ref|XP_004962477.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           33A-like isoform X3 [Setaria italica]
          Length = 1225

 Score =  109 bits (272), Expect = 4e-22
 Identities = 53/88 (60%), Positives = 68/88 (77%), Gaps = 5/88 (5%)
 Frame = +2

Query: 2   GDPPLLRAVEAARCFQESGLGIPSTE-----LARVLVSNLCFANNNPSLWKLLDQAMASR 166
           GDPPLL+A EA+RC +E+     ++      LA  LV+NLCFA+N  ++WKLLDQAM+SR
Sbjct: 23  GDPPLLQAAEASRCAREAAASASASASCGLALAEALVANLCFAHNTGAMWKLLDQAMSSR 82

Query: 167 VVSPIHTIALLMPRVIPCRREQPEAYRL 250
           +V P+HT+ALL PRV+P RREQPEAYRL
Sbjct: 83  LVHPLHTLALLTPRVVPNRREQPEAYRL 110


>ref|XP_004962476.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           33A-like isoform X2 [Setaria italica]
          Length = 1271

 Score =  109 bits (272), Expect = 4e-22
 Identities = 53/88 (60%), Positives = 68/88 (77%), Gaps = 5/88 (5%)
 Frame = +2

Query: 2   GDPPLLRAVEAARCFQESGLGIPSTE-----LARVLVSNLCFANNNPSLWKLLDQAMASR 166
           GDPPLL+A EA+RC +E+     ++      LA  LV+NLCFA+N  ++WKLLDQAM+SR
Sbjct: 23  GDPPLLQAAEASRCAREAAASASASASCGLALAEALVANLCFAHNTGAMWKLLDQAMSSR 82

Query: 167 VVSPIHTIALLMPRVIPCRREQPEAYRL 250
           +V P+HT+ALL PRV+P RREQPEAYRL
Sbjct: 83  LVHPLHTLALLTPRVVPNRREQPEAYRL 110


>ref|XP_004962475.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           33A-like isoform X1 [Setaria italica]
          Length = 1299

 Score =  109 bits (272), Expect = 4e-22
 Identities = 53/88 (60%), Positives = 68/88 (77%), Gaps = 5/88 (5%)
 Frame = +2

Query: 2   GDPPLLRAVEAARCFQESGLGIPSTE-----LARVLVSNLCFANNNPSLWKLLDQAMASR 166
           GDPPLL+A EA+RC +E+     ++      LA  LV+NLCFA+N  ++WKLLDQAM+SR
Sbjct: 23  GDPPLLQAAEASRCAREAAASASASASCGLALAEALVANLCFAHNTGAMWKLLDQAMSSR 82

Query: 167 VVSPIHTIALLMPRVIPCRREQPEAYRL 250
           +V P+HT+ALL PRV+P RREQPEAYRL
Sbjct: 83  LVHPLHTLALLTPRVVPNRREQPEAYRL 110


>ref|XP_002439368.1| hypothetical protein SORBIDRAFT_09g005235 [Sorghum bicolor]
           gi|241944653|gb|EES17798.1| hypothetical protein
           SORBIDRAFT_09g005235 [Sorghum bicolor]
          Length = 1237

 Score =  109 bits (272), Expect = 4e-22
 Identities = 53/86 (61%), Positives = 65/86 (75%), Gaps = 3/86 (3%)
 Frame = +2

Query: 2   GDPPLLRAVEAARCFQESGLGIP---STELARVLVSNLCFANNNPSLWKLLDQAMASRVV 172
           GDPPLL+A EAARC +E            L++ LV+NLCFA+N  ++WKLLDQAM SR+V
Sbjct: 27  GDPPLLQAAEAARCIREGPTASAPGGGLALSQALVTNLCFAHNTAAMWKLLDQAMLSRLV 86

Query: 173 SPIHTIALLMPRVIPCRREQPEAYRL 250
            P+HT+ALL PRV+P RREQPEAYRL
Sbjct: 87  DPLHTLALLTPRVVPSRREQPEAYRL 112


>tpg|DAA64148.1| TPA: hypothetical protein ZEAMMB73_850292 [Zea mays]
          Length = 1304

 Score =  108 bits (271), Expect = 6e-22
 Identities = 53/84 (63%), Positives = 66/84 (78%), Gaps = 1/84 (1%)
 Frame = +2

Query: 2   GDPPLLRAVEAARCFQESGLG-IPSTELARVLVSNLCFANNNPSLWKLLDQAMASRVVSP 178
           GDPPLL+ VE +R     G G + S +LAR+LVSNLCFA+N+PSLWKLL QA+ SR++ P
Sbjct: 11  GDPPLLQVVELSRIVAVEGAGTLSSADLARILVSNLCFAHNSPSLWKLLGQAVVSRLLCP 70

Query: 179 IHTIALLMPRVIPCRREQPEAYRL 250
           +H +ALL PRV+P RR QPEAYRL
Sbjct: 71  LHVLALLTPRVLPQRRAQPEAYRL 94


>ref|XP_002264843.1| PREDICTED: uncharacterized protein LOC100258764 [Vitis vinifera]
          Length = 1330

 Score =  105 bits (263), Expect = 5e-21
 Identities = 47/82 (57%), Positives = 63/82 (76%)
 Frame = +2

Query: 5   DPPLLRAVEAARCFQESGLGIPSTELARVLVSNLCFANNNPSLWKLLDQAMASRVVSPIH 184
           +PPL+ A E  +C   +GLG+PS EL +VLVS LCFA+N PS+WK LD A++SR++SP+H
Sbjct: 24  EPPLIWATEMVKCLDSAGLGLPSVELGQVLVSQLCFAHNCPSMWKFLDHALSSRLLSPLH 83

Query: 185 TIALLMPRVIPCRREQPEAYRL 250
            ++LL  R+IP R  QPEAYRL
Sbjct: 84  VLSLLTSRIIPHRWSQPEAYRL 105


>gb|EEC78956.1| hypothetical protein OsI_19416 [Oryza sativa Indica Group]
          Length = 1233

 Score =  103 bits (258), Expect = 2e-20
 Identities = 53/88 (60%), Positives = 65/88 (73%), Gaps = 5/88 (5%)
 Frame = +2

Query: 2   GDPPLLRAVEAARCFQESGLGIP-----STELARVLVSNLCFANNNPSLWKLLDQAMASR 166
           GDPPLL+A EAARC +E+   I         LA  LVSNLCFA+N  ++WK+LDQAMASR
Sbjct: 27  GDPPLLQAAEAARCAREASSSISVDGGAGAALAAALVSNLCFAHNTGAMWKVLDQAMASR 86

Query: 167 VVSPIHTIALLMPRVIPCRREQPEAYRL 250
           +VSP+  +ALL PRV+P R+ QPEAYRL
Sbjct: 87  LVSPLLALALLTPRVVPNRQAQPEAYRL 114


>gb|EEE63202.1| hypothetical protein OsJ_18012 [Oryza sativa Japonica Group]
          Length = 142

 Score =  103 bits (258), Expect = 2e-20
 Identities = 53/88 (60%), Positives = 65/88 (73%), Gaps = 5/88 (5%)
 Frame = +2

Query: 2   GDPPLLRAVEAARCFQESGLGIP-----STELARVLVSNLCFANNNPSLWKLLDQAMASR 166
           GDPPLL+A EAARC +E+   I         LA  LVSNLCFA+N  ++WK+LDQAMASR
Sbjct: 27  GDPPLLQAAEAARCAREASSSISVDGGAGAALAAALVSNLCFAHNTGAMWKVLDQAMASR 86

Query: 167 VVSPIHTIALLMPRVIPCRREQPEAYRL 250
           +VSP+  +ALL PRV+P R+ QPEAYRL
Sbjct: 87  LVSPLLALALLTPRVVPNRQAQPEAYRL 114


>ref|XP_002519970.1| hypothetical protein RCOM_1322820 [Ricinus communis]
           gi|223540734|gb|EEF42294.1| hypothetical protein
           RCOM_1322820 [Ricinus communis]
          Length = 135

 Score =  100 bits (248), Expect = 3e-19
 Identities = 46/80 (57%), Positives = 60/80 (75%)
 Frame = +2

Query: 11  PLLRAVEAARCFQESGLGIPSTELARVLVSNLCFANNNPSLWKLLDQAMASRVVSPIHTI 190
           PL+  +E A+C    G+ +PS EL +VLVS LCF NN+PSLWK L Q+++SR+VS +H +
Sbjct: 29  PLVMGMEVAKCLVSLGISVPSPELGQVLVSYLCFQNNHPSLWKFLQQSLSSRLVSSLHVL 88

Query: 191 ALLMPRVIPCRREQPEAYRL 250
           +LL  RVIP RR QPEAYRL
Sbjct: 89  SLLSSRVIPNRRSQPEAYRL 108