BLASTX nr result
ID: Zingiber23_contig00042171
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00042171
(235 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003522664.1| PREDICTED: uncharacterized protein DDB_G0271... 100 3e-19
ref|XP_002332113.1| predicted protein [Populus trichocarpa] gi|5... 97 2e-18
gb|AFK47873.1| unknown [Medicago truncatula] 97 3e-18
gb|AFK43078.1| unknown [Medicago truncatula] 97 3e-18
ref|XP_003526456.1| PREDICTED: uncharacterized protein DDB_G0271... 95 8e-18
gb|ESW09114.1| hypothetical protein PHAVU_009G101200g [Phaseolus... 94 1e-17
gb|AFK36630.1| unknown [Lotus japonicus] 94 2e-17
ref|XP_004501243.1| PREDICTED: cell wall protein AWA1-like isofo... 93 3e-17
gb|EXC32721.1| E3 ubiquitin ligase BIG BROTHER [Morus notabilis] 93 4e-17
ref|XP_006399562.1| hypothetical protein EUTSA_v10013256mg [Eutr... 91 1e-16
emb|CBI20761.3| unnamed protein product [Vitis vinifera] 91 1e-16
ref|XP_002280551.1| PREDICTED: uncharacterized protein LOC100245... 91 1e-16
ref|XP_002873468.1| zinc finger family protein [Arabidopsis lyra... 91 2e-16
ref|XP_006845706.1| hypothetical protein AMTR_s00019p00239960 [A... 90 3e-16
ref|XP_006394739.1| hypothetical protein EUTSA_v10004038mg [Eutr... 89 5e-16
ref|XP_004244491.1| PREDICTED: uncharacterized protein LOC101266... 89 5e-16
gb|AFW69267.1| putative RING zinc finger domain superfamily prot... 89 5e-16
gb|ACN27171.1| unknown [Zea mays] 89 5e-16
gb|EOY29216.1| RING/U-box superfamily protein, putative isoform ... 88 1e-15
ref|XP_002330765.1| predicted protein [Populus trichocarpa] gi|5... 88 1e-15
>ref|XP_003522664.1| PREDICTED: uncharacterized protein DDB_G0271670-like isoform X1
[Glycine max]
Length = 542
Score = 99.8 bits (247), Expect = 3e-19
Identities = 42/65 (64%), Positives = 50/65 (76%)
Frame = +3
Query: 21 PTSPISGFSRSNEGDTKCSICQEEWVAEDEIGSLVCEHFYHAQCIHQWLQLKNWCPICKA 200
P+ + ++ DTKCSICQEE+VA DE+GSL CEH YH CI QWLQLKNWCPICKA
Sbjct: 472 PSENAAESCNEHKDDTKCSICQEEYVAADEVGSLQCEHAYHVACIQQWLQLKNWCPICKA 531
Query: 201 SVSPT 215
SV+P+
Sbjct: 532 SVAPS 536
>ref|XP_002332113.1| predicted protein [Populus trichocarpa]
gi|566214077|ref|XP_006371798.1| zinc finger family
protein [Populus trichocarpa]
gi|550317971|gb|ERP49595.1| zinc finger family protein
[Populus trichocarpa]
Length = 543
Score = 97.1 bits (240), Expect = 2e-18
Identities = 42/68 (61%), Positives = 51/68 (75%), Gaps = 3/68 (4%)
Frame = +3
Query: 24 TSPISGFSRSNEGDT---KCSICQEEWVAEDEIGSLVCEHFYHAQCIHQWLQLKNWCPIC 194
++P+ + + EGD KCSICQEE+V DE+G L CEH YH CIHQWL LKNWCPIC
Sbjct: 473 STPMEDATANLEGDKDDIKCSICQEEYVVGDEVGRLQCEHGYHMSCIHQWLSLKNWCPIC 532
Query: 195 KASVSPTP 218
KASV+P+P
Sbjct: 533 KASVAPSP 540
>gb|AFK47873.1| unknown [Medicago truncatula]
Length = 160
Score = 96.7 bits (239), Expect = 3e-18
Identities = 40/65 (61%), Positives = 49/65 (75%)
Frame = +3
Query: 21 PTSPISGFSRSNEGDTKCSICQEEWVAEDEIGSLVCEHFYHAQCIHQWLQLKNWCPICKA 200
P+ + N+ D KC ICQEE+V EDE+GSL+CEH YH CI QWL+LKNWCPICKA
Sbjct: 90 PSDNATKCCNENKDDIKCCICQEEYVEEDEVGSLLCEHKYHVVCIQQWLRLKNWCPICKA 149
Query: 201 SVSPT 215
SV+P+
Sbjct: 150 SVTPS 154
>gb|AFK43078.1| unknown [Medicago truncatula]
Length = 185
Score = 96.7 bits (239), Expect = 3e-18
Identities = 40/65 (61%), Positives = 49/65 (75%)
Frame = +3
Query: 21 PTSPISGFSRSNEGDTKCSICQEEWVAEDEIGSLVCEHFYHAQCIHQWLQLKNWCPICKA 200
P+ + N+ D KC ICQEE+V EDE+GSL+CEH YH CI QWL+LKNWCPICKA
Sbjct: 115 PSDNATKCCNENKDDIKCCICQEEYVEEDEVGSLLCEHKYHVVCIQQWLRLKNWCPICKA 174
Query: 201 SVSPT 215
SV+P+
Sbjct: 175 SVTPS 179
>ref|XP_003526456.1| PREDICTED: uncharacterized protein DDB_G0271670-like [Glycine max]
Length = 541
Score = 95.1 bits (235), Expect = 8e-18
Identities = 39/49 (79%), Positives = 43/49 (87%)
Frame = +3
Query: 63 DTKCSICQEEWVAEDEIGSLVCEHFYHAQCIHQWLQLKNWCPICKASVS 209
DTKCSICQEE+VA +E+GSL CEH YH CI QWLQLKNWCPICKASV+
Sbjct: 486 DTKCSICQEEYVAAEEVGSLQCEHMYHVACIQQWLQLKNWCPICKASVA 534
>gb|ESW09114.1| hypothetical protein PHAVU_009G101200g [Phaseolus vulgaris]
Length = 543
Score = 94.4 bits (233), Expect = 1e-17
Identities = 39/48 (81%), Positives = 42/48 (87%)
Frame = +3
Query: 63 DTKCSICQEEWVAEDEIGSLVCEHFYHAQCIHQWLQLKNWCPICKASV 206
DTKCSICQEE+V EDE+GSL CEH YH CI QWL+LKNWCPICKASV
Sbjct: 487 DTKCSICQEEYVVEDELGSLHCEHMYHVVCIQQWLRLKNWCPICKASV 534
>gb|AFK36630.1| unknown [Lotus japonicus]
Length = 184
Score = 94.0 bits (232), Expect = 2e-17
Identities = 40/68 (58%), Positives = 50/68 (73%)
Frame = +3
Query: 6 RSNYVPTSPISGFSRSNEGDTKCSICQEEWVAEDEIGSLVCEHFYHAQCIHQWLQLKNWC 185
++ Y P++ + N+ D KCSICQEE+VA DE+GSL CEH YH CI QWL+LKNWC
Sbjct: 108 KNPYQPSASDNVTCNENKDDIKCSICQEEYVAADEVGSLKCEHKYHVVCIQQWLRLKNWC 167
Query: 186 PICKASVS 209
PICKA V+
Sbjct: 168 PICKAPVA 175
>ref|XP_004501243.1| PREDICTED: cell wall protein AWA1-like isoform X1 [Cicer arietinum]
gi|502132155|ref|XP_004501244.1| PREDICTED: cell wall
protein AWA1-like isoform X2 [Cicer arietinum]
Length = 540
Score = 93.2 bits (230), Expect = 3e-17
Identities = 41/71 (57%), Positives = 53/71 (74%), Gaps = 3/71 (4%)
Frame = +3
Query: 6 RSNYVPTSPISGFSRS---NEGDTKCSICQEEWVAEDEIGSLVCEHFYHAQCIHQWLQLK 176
+ ++ +SP + ++S N+ D KCSICQEE+V DE+GSL CEH YH CI QWL+LK
Sbjct: 462 KRSFYQSSPSNNAAKSCNENKDDIKCSICQEEYVVADELGSLQCEHKYHLVCIQQWLRLK 521
Query: 177 NWCPICKASVS 209
NWCPICKASV+
Sbjct: 522 NWCPICKASVA 532
>gb|EXC32721.1| E3 ubiquitin ligase BIG BROTHER [Morus notabilis]
Length = 555
Score = 92.8 bits (229), Expect = 4e-17
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +3
Query: 33 ISGFSRSNEGDTKCSICQEEWVAEDEIGSLVCEHFYHAQCIHQWLQLKNWCPICKASVSP 212
+SG + N+ D KCSICQEE+V DE+G L CEH YH CI QWL+LKNWCP+CK+S +P
Sbjct: 483 VSGRNGDND-DVKCSICQEEYVGGDEVGRLQCEHRYHVACIQQWLRLKNWCPVCKSSAAP 541
Query: 213 TP 218
+P
Sbjct: 542 SP 543
>ref|XP_006399562.1| hypothetical protein EUTSA_v10013256mg [Eutrema salsugineum]
gi|557100652|gb|ESQ41015.1| hypothetical protein
EUTSA_v10013256mg [Eutrema salsugineum]
Length = 523
Score = 91.3 bits (225), Expect = 1e-16
Identities = 35/66 (53%), Positives = 47/66 (71%)
Frame = +3
Query: 6 RSNYVPTSPISGFSRSNEGDTKCSICQEEWVAEDEIGSLVCEHFYHAQCIHQWLQLKNWC 185
+S Y+ T S + + D KCSICQEE++A DE+G++ CEH YH C+ QWL++KNWC
Sbjct: 451 KSIYLETDETCASSLNKDDDIKCSICQEEYIAGDEVGTMPCEHMYHVSCVQQWLRMKNWC 510
Query: 186 PICKAS 203
PICK S
Sbjct: 511 PICKTS 516
>emb|CBI20761.3| unnamed protein product [Vitis vinifera]
Length = 403
Score = 91.3 bits (225), Expect = 1e-16
Identities = 37/64 (57%), Positives = 46/64 (71%)
Frame = +3
Query: 18 VPTSPISGFSRSNEGDTKCSICQEEWVAEDEIGSLVCEHFYHAQCIHQWLQLKNWCPICK 197
+PT P + + D KCSICQEE++ DE+G L CEH YH CIHQWL+LKNWCP+CK
Sbjct: 339 LPTEPGTMDCAGDGDDVKCSICQEEYMVGDEVGKLQCEHGYHVACIHQWLRLKNWCPVCK 398
Query: 198 ASVS 209
AS +
Sbjct: 399 ASAA 402
>ref|XP_002280551.1| PREDICTED: uncharacterized protein LOC100245643 [Vitis vinifera]
Length = 550
Score = 91.3 bits (225), Expect = 1e-16
Identities = 37/64 (57%), Positives = 46/64 (71%)
Frame = +3
Query: 18 VPTSPISGFSRSNEGDTKCSICQEEWVAEDEIGSLVCEHFYHAQCIHQWLQLKNWCPICK 197
+PT P + + D KCSICQEE++ DE+G L CEH YH CIHQWL+LKNWCP+CK
Sbjct: 486 LPTEPGTMDCAGDGDDVKCSICQEEYMVGDEVGKLQCEHGYHVACIHQWLRLKNWCPVCK 545
Query: 198 ASVS 209
AS +
Sbjct: 546 ASAA 549
>ref|XP_002873468.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297319305|gb|EFH49727.1| zinc finger family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 526
Score = 90.9 bits (224), Expect = 2e-16
Identities = 36/66 (54%), Positives = 45/66 (68%)
Frame = +3
Query: 6 RSNYVPTSPISGFSRSNEGDTKCSICQEEWVAEDEIGSLVCEHFYHAQCIHQWLQLKNWC 185
+S Y T S S E D KCSICQEE+V DE+G++ C+H YH C+ QWL++KNWC
Sbjct: 457 QSTYQKTDETGSISLSKEDDIKCSICQEEFVDGDEVGTMPCQHMYHVSCVQQWLRMKNWC 516
Query: 186 PICKAS 203
PICK S
Sbjct: 517 PICKTS 522
>ref|XP_006845706.1| hypothetical protein AMTR_s00019p00239960 [Amborella trichopoda]
gi|548848278|gb|ERN07381.1| hypothetical protein
AMTR_s00019p00239960 [Amborella trichopoda]
Length = 551
Score = 90.1 bits (222), Expect = 3e-16
Identities = 39/68 (57%), Positives = 47/68 (69%)
Frame = +3
Query: 6 RSNYVPTSPISGFSRSNEGDTKCSICQEEWVAEDEIGSLVCEHFYHAQCIHQWLQLKNWC 185
RS + S + F+ + DTKCSICQEE+V DE+G L CEH YH CI +WL+LKNWC
Sbjct: 483 RSLFSSVSSVPRFTICGDVDTKCSICQEEYVDGDEVGDLNCEHRYHVGCIEEWLRLKNWC 542
Query: 186 PICKASVS 209
PICKA S
Sbjct: 543 PICKAEAS 550
>ref|XP_006394739.1| hypothetical protein EUTSA_v10004038mg [Eutrema salsugineum]
gi|557091378|gb|ESQ32025.1| hypothetical protein
EUTSA_v10004038mg [Eutrema salsugineum]
Length = 509
Score = 89.4 bits (220), Expect = 5e-16
Identities = 36/70 (51%), Positives = 44/70 (62%)
Frame = +3
Query: 9 SNYVPTSPISGFSRSNEGDTKCSICQEEWVAEDEIGSLVCEHFYHAQCIHQWLQLKNWCP 188
S Y P G + + D KCSICQEE+V DE+G+L C+H YH C QWL++KNWCP
Sbjct: 435 SIYRPIDESGGICLNKDDDVKCSICQEEYVDGDEVGNLPCQHMYHVSCAQQWLRMKNWCP 494
Query: 189 ICKASVSPTP 218
ICK S P
Sbjct: 495 ICKTSAESQP 504
>ref|XP_004244491.1| PREDICTED: uncharacterized protein LOC101266656 [Solanum
lycopersicum]
Length = 531
Score = 89.4 bits (220), Expect = 5e-16
Identities = 36/57 (63%), Positives = 43/57 (75%)
Frame = +3
Query: 45 SRSNEGDTKCSICQEEWVAEDEIGSLVCEHFYHAQCIHQWLQLKNWCPICKASVSPT 215
S NE + KCSICQEE+V DEIG L C+H YH +C+ WL LKNWCPICKAS +P+
Sbjct: 475 SGENEDEVKCSICQEEYVIGDEIGRLECDHGYHMECVKHWLSLKNWCPICKASAAPS 531
>gb|AFW69267.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 585
Score = 89.4 bits (220), Expect = 5e-16
Identities = 37/71 (52%), Positives = 49/71 (69%)
Frame = +3
Query: 3 NRSNYVPTSPISGFSRSNEGDTKCSICQEEWVAEDEIGSLVCEHFYHAQCIHQWLQLKNW 182
N+S Y + S+ D KCS+CQEE+V +EIG++ CEH YH +CIH+WL+ KNW
Sbjct: 508 NQSVYEARNSYRDVSKIAADDVKCSVCQEEYVDGEEIGTMQCEHQYHVRCIHEWLKQKNW 567
Query: 183 CPICKASVSPT 215
CPICKAS P+
Sbjct: 568 CPICKASAIPS 578
>gb|ACN27171.1| unknown [Zea mays]
Length = 175
Score = 89.4 bits (220), Expect = 5e-16
Identities = 37/71 (52%), Positives = 49/71 (69%)
Frame = +3
Query: 3 NRSNYVPTSPISGFSRSNEGDTKCSICQEEWVAEDEIGSLVCEHFYHAQCIHQWLQLKNW 182
N+S Y + S+ D KCS+CQEE+V +EIG++ CEH YH +CIH+WL+ KNW
Sbjct: 98 NQSVYEARNSYRDVSKIAADDVKCSVCQEEYVDGEEIGTMQCEHQYHVRCIHEWLKQKNW 157
Query: 183 CPICKASVSPT 215
CPICKAS P+
Sbjct: 158 CPICKASAIPS 168
>gb|EOY29216.1| RING/U-box superfamily protein, putative isoform 1 [Theobroma
cacao]
Length = 494
Score = 88.2 bits (217), Expect = 1e-15
Identities = 43/72 (59%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Frame = +3
Query: 6 RSNYVPTSPISGFSRSNEG---DTKCSICQEEWVAEDEIGSLVCEHFYHAQCIHQWLQLK 176
+S Y TS G + S EG D KCSICQEE+V DE+G L CEH YH CI QWL++K
Sbjct: 416 KSIYEATSSEDG-NVSCEGEKDDVKCSICQEEYVIGDEVGRLQCEHRYHVACIQQWLRVK 474
Query: 177 NWCPICKASVSP 212
NWCPICKAS P
Sbjct: 475 NWCPICKASAEP 486
>ref|XP_002330765.1| predicted protein [Populus trichocarpa]
gi|566178702|ref|XP_006382161.1| hypothetical protein
POPTR_0006s28960g [Populus trichocarpa]
gi|550337316|gb|ERP59958.1| hypothetical protein
POPTR_0006s28960g [Populus trichocarpa]
Length = 505
Score = 88.2 bits (217), Expect = 1e-15
Identities = 37/73 (50%), Positives = 50/73 (68%), Gaps = 3/73 (4%)
Frame = +3
Query: 6 RSNYVPTSPISGFSRSNEGDT---KCSICQEEWVAEDEIGSLVCEHFYHAQCIHQWLQLK 176
+++ ++P+ + + EGD +CSICQEE+ DE+G L CEH YH CIHQWL LK
Sbjct: 423 KTSIYESTPMEDATTNLEGDKDDIRCSICQEEYADGDEVGRLPCEHRYHVACIHQWLSLK 482
Query: 177 NWCPICKASVSPT 215
NWCPICK S +P+
Sbjct: 483 NWCPICKTSAAPS 495