BLASTX nr result
ID: Zingiber23_contig00042137
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00042137
(345 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001169910.1| uncharacterized protein LOC100383807 [Zea ma... 72 8e-11
ref|XP_004973547.1| PREDICTED: poly(A)-specific ribonuclease PAR... 69 8e-10
gb|EEE68767.1| hypothetical protein OsJ_27469 [Oryza sativa Japo... 69 8e-10
gb|EEC83639.1| hypothetical protein OsI_29373 [Oryza sativa Indi... 69 8e-10
ref|XP_006418630.1| hypothetical protein EUTSA_v10002449mg [Eutr... 68 1e-09
dbj|BAK06461.1| predicted protein [Hordeum vulgare subsp. vulgare] 66 4e-09
gb|EMT01997.1| Poly(A)-specific ribonuclease PARN-like protein [... 66 5e-09
gb|EMJ02813.1| hypothetical protein PRUPE_ppa019832mg [Prunus pe... 66 5e-09
ref|XP_004292332.1| PREDICTED: poly(A)-specific ribonuclease PAR... 65 7e-09
ref|XP_003572239.1| PREDICTED: poly(A)-specific ribonuclease PAR... 64 2e-08
ref|XP_002444414.1| hypothetical protein SORBIDRAFT_07g021600 [S... 64 3e-08
ref|XP_003634836.1| PREDICTED: poly(A)-specific ribonuclease PAR... 63 4e-08
emb|CBI35579.3| unnamed protein product [Vitis vinifera] 63 4e-08
ref|XP_006299254.1| hypothetical protein CARUB_v10015403mg [Caps... 62 8e-08
ref|XP_004247263.1| PREDICTED: poly(A)-specific ribonuclease PAR... 62 8e-08
ref|XP_002527264.1| ribonuclease, putative [Ricinus communis] gi... 62 8e-08
ref|NP_189170.1| poly(A)-specific ribonuclease PARN-like protein... 61 1e-07
ref|XP_006345714.1| PREDICTED: poly(A)-specific ribonuclease PAR... 61 2e-07
ref|XP_003532241.1| PREDICTED: poly(A)-specific ribonuclease PAR... 60 3e-07
gb|EOX93743.1| Poly(A)-specific ribonuclease PARN-like, putative... 59 7e-07
>ref|NP_001169910.1| uncharacterized protein LOC100383807 [Zea mays]
gi|224032309|gb|ACN35230.1| unknown [Zea mays]
Length = 280
Score = 72.0 bits (175), Expect = 8e-11
Identities = 34/68 (50%), Positives = 49/68 (72%)
Frame = +3
Query: 6 LSKMKSEGLKAAGYQCYKKVCRLGLWDANLSDSLENVMSDPADGISTFSEKDASEVSWTS 185
L++ SEGLKAAG++ YKKVCRLGLWD++L++ LE+V S+ G+ T E S++ W S
Sbjct: 212 LNRFFSEGLKAAGFEVYKKVCRLGLWDSDLAEVLEDVSSEL--GVPTLPECSTSQIYWNS 269
Query: 186 EYAIDLSD 209
E +DL +
Sbjct: 270 ELMLDLKE 277
>ref|XP_004973547.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Setaria
italica]
Length = 599
Score = 68.6 bits (166), Expect = 8e-10
Identities = 33/68 (48%), Positives = 48/68 (70%)
Frame = +3
Query: 6 LSKMKSEGLKAAGYQCYKKVCRLGLWDANLSDSLENVMSDPADGISTFSEKDASEVSWTS 185
L+ SEGLKAAG++ Y+K CRLGLWD++L+++LE V S+ A ST SE ++S + W S
Sbjct: 530 LNSFFSEGLKAAGFEVYRKACRLGLWDSDLAEALEGVSSEIA--ASTLSECNSSPIYWNS 587
Query: 186 EYAIDLSD 209
+DL +
Sbjct: 588 SLMLDLKE 595
>gb|EEE68767.1| hypothetical protein OsJ_27469 [Oryza sativa Japonica Group]
Length = 601
Score = 68.6 bits (166), Expect = 8e-10
Identities = 31/68 (45%), Positives = 47/68 (69%)
Frame = +3
Query: 6 LSKMKSEGLKAAGYQCYKKVCRLGLWDANLSDSLENVMSDPADGISTFSEKDASEVSWTS 185
L+ SEGLKAAG+ Y+KVCR GLWD++L+++L+ V S+P+ ST S + SE+ W +
Sbjct: 532 LNNFFSEGLKAAGFDAYRKVCRSGLWDSDLAEALDGVSSEPS--TSTLSGRGTSEICWNT 589
Query: 186 EYAIDLSD 209
+DL +
Sbjct: 590 SLMLDLKE 597
>gb|EEC83639.1| hypothetical protein OsI_29373 [Oryza sativa Indica Group]
Length = 602
Score = 68.6 bits (166), Expect = 8e-10
Identities = 31/68 (45%), Positives = 47/68 (69%)
Frame = +3
Query: 6 LSKMKSEGLKAAGYQCYKKVCRLGLWDANLSDSLENVMSDPADGISTFSEKDASEVSWTS 185
L+ SEGLKAAG+ Y+KVCR GLWD++L+++L+ V S+P+ ST S + SE+ W +
Sbjct: 533 LNNFFSEGLKAAGFDAYRKVCRSGLWDSDLAEALDGVSSEPS--TSTLSGRGTSEICWNT 590
Query: 186 EYAIDLSD 209
+DL +
Sbjct: 591 SLMLDLKE 598
>ref|XP_006418630.1| hypothetical protein EUTSA_v10002449mg [Eutrema salsugineum]
gi|557096558|gb|ESQ37066.1| hypothetical protein
EUTSA_v10002449mg [Eutrema salsugineum]
Length = 610
Score = 68.2 bits (165), Expect = 1e-09
Identities = 32/69 (46%), Positives = 46/69 (66%)
Frame = +3
Query: 6 LSKMKSEGLKAAGYQCYKKVCRLGLWDANLSDSLENVMSDPADGISTFSEKDASEVSWTS 185
L M +EGL+AAGY+ YK+ CRLG W+A+L+DSL+ + + S+ SE+SWTS
Sbjct: 544 LRVMVAEGLRAAGYETYKRACRLGFWEADLADSLDKTLESSDTDLD--SDTKPSEISWTS 601
Query: 186 EYAIDLSDL 212
E AI+ +L
Sbjct: 602 ELAINFDEL 610
>dbj|BAK06461.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 595
Score = 66.2 bits (160), Expect = 4e-09
Identities = 31/68 (45%), Positives = 45/68 (66%)
Frame = +3
Query: 6 LSKMKSEGLKAAGYQCYKKVCRLGLWDANLSDSLENVMSDPADGISTFSEKDASEVSWTS 185
L+ SEGLKAAG+ Y+K C LGLWD++L+++LE +PA ST S+ +SE+ W S
Sbjct: 526 LNNFFSEGLKAAGFDVYRKACSLGLWDSDLAEALEGASLEPA--TSTVSDHGSSEIYWNS 583
Query: 186 EYAIDLSD 209
+DL +
Sbjct: 584 SLKLDLKE 591
>gb|EMT01997.1| Poly(A)-specific ribonuclease PARN-like protein [Aegilops tauschii]
Length = 586
Score = 65.9 bits (159), Expect = 5e-09
Identities = 31/68 (45%), Positives = 45/68 (66%)
Frame = +3
Query: 6 LSKMKSEGLKAAGYQCYKKVCRLGLWDANLSDSLENVMSDPADGISTFSEKDASEVSWTS 185
L+ SEGLKAAG+ Y+K C GLWD++L+++LE+ +PA ST SE +SE+ W S
Sbjct: 517 LNNFFSEGLKAAGFDVYRKACSSGLWDSDLAEALESASLEPA--TSTISEHGSSEIYWNS 574
Query: 186 EYAIDLSD 209
+DL +
Sbjct: 575 SLKLDLKE 582
>gb|EMJ02813.1| hypothetical protein PRUPE_ppa019832mg [Prunus persica]
Length = 380
Score = 65.9 bits (159), Expect = 5e-09
Identities = 28/69 (40%), Positives = 46/69 (66%)
Frame = +3
Query: 6 LSKMKSEGLKAAGYQCYKKVCRLGLWDANLSDSLENVMSDPADGISTFSEKDASEVSWTS 185
L ++ SEGL+A+ Y+ YK+VCRLGLW+ANL++SL+ + DP + + E+ W+S
Sbjct: 312 LREIVSEGLRASSYEAYKRVCRLGLWEANLAESLDRALEDPDCLVEANLAANCKEIYWSS 371
Query: 186 EYAIDLSDL 212
+ I+ +L
Sbjct: 372 DSTINFDNL 380
>ref|XP_004292332.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Fragaria vesca
subsp. vesca]
Length = 221
Score = 65.5 bits (158), Expect = 7e-09
Identities = 29/69 (42%), Positives = 44/69 (63%)
Frame = +3
Query: 6 LSKMKSEGLKAAGYQCYKKVCRLGLWDANLSDSLENVMSDPADGISTFSEKDASEVSWTS 185
L +M SEGL+A YQ YK+VC LGLW+A+L+DSL+ + P + S + E+ W++
Sbjct: 153 LREMVSEGLRATSYQTYKRVCNLGLWEADLADSLDKALEHPDYNMEADSTTNRREILWST 212
Query: 186 EYAIDLSDL 212
+ I+ DL
Sbjct: 213 DSMINFDDL 221
>ref|XP_003572239.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Brachypodium
distachyon]
Length = 596
Score = 63.9 bits (154), Expect = 2e-08
Identities = 32/68 (47%), Positives = 44/68 (64%)
Frame = +3
Query: 6 LSKMKSEGLKAAGYQCYKKVCRLGLWDANLSDSLENVMSDPADGISTFSEKDASEVSWTS 185
L+ SEGLKAAG+ Y KVCRLGLWD++L+++LE V S+ A S S SE+ W S
Sbjct: 527 LNNFFSEGLKAAGFDVYWKVCRLGLWDSDLAEALEAVSSEQA--TSALSGHGTSEIYWNS 584
Query: 186 EYAIDLSD 209
+D+ +
Sbjct: 585 SLMLDIKE 592
>ref|XP_002444414.1| hypothetical protein SORBIDRAFT_07g021600 [Sorghum bicolor]
gi|241940764|gb|EES13909.1| hypothetical protein
SORBIDRAFT_07g021600 [Sorghum bicolor]
Length = 599
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/68 (44%), Positives = 45/68 (66%)
Frame = +3
Query: 6 LSKMKSEGLKAAGYQCYKKVCRLGLWDANLSDSLENVMSDPADGISTFSEKDASEVSWTS 185
L++ SEGLKAAG++ Y+KVCRLGLWD++L++ LE+V ++ G+ T S W S
Sbjct: 530 LNRFLSEGLKAAGFEVYRKVCRLGLWDSDLAEVLEDVSTEL--GVPTLPACSTSRTYWNS 587
Query: 186 EYAIDLSD 209
+DL +
Sbjct: 588 ALMLDLKE 595
>ref|XP_003634836.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Vitis vinifera]
Length = 515
Score = 63.2 bits (152), Expect = 4e-08
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Frame = +3
Query: 6 LSKMKSEGLKAAGYQCYKKVCRLGLWDANLSDSLENVMSDPADGISTFSE---KDASEVS 176
L +M SEGL+AAGY+ YK CRLG W+A+L+DSL+ + +P SE S++
Sbjct: 444 LREMVSEGLRAAGYETYKNACRLGFWEADLADSLDKALEEPDHNSEADSEAKPTGPSQIY 503
Query: 177 WTSEYAIDLSDL 212
W+ + I+L +L
Sbjct: 504 WSRDSIINLDEL 515
>emb|CBI35579.3| unnamed protein product [Vitis vinifera]
Length = 6458
Score = 63.2 bits (152), Expect = 4e-08
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Frame = +3
Query: 6 LSKMKSEGLKAAGYQCYKKVCRLGLWDANLSDSLENVMSDPADGISTFSE---KDASEVS 176
L +M SEGL+AAGY+ YK CRLG W+A+L+DSL+ + +P SE S++
Sbjct: 6387 LREMVSEGLRAAGYETYKNACRLGFWEADLADSLDKALEEPDHNSEADSEAKPTGPSQIY 6446
Query: 177 WTSEYAIDLSDL 212
W+ + I+L +L
Sbjct: 6447 WSRDSIINLDEL 6458
>ref|XP_006299254.1| hypothetical protein CARUB_v10015403mg [Capsella rubella]
gi|482567963|gb|EOA32152.1| hypothetical protein
CARUB_v10015403mg [Capsella rubella]
Length = 616
Score = 62.0 bits (149), Expect = 8e-08
Identities = 29/69 (42%), Positives = 49/69 (71%)
Frame = +3
Query: 6 LSKMKSEGLKAAGYQCYKKVCRLGLWDANLSDSLENVMSDPADGISTFSEKDASEVSWTS 185
L +M +EGL+AAGY+ YK+ CRLG W+A+L++SL+ + D +D S+ SE++W++
Sbjct: 550 LREMVAEGLRAAGYETYKRACRLGFWEADLAESLDKTL-DSSD-TEHDSDTKPSEINWSN 607
Query: 186 EYAIDLSDL 212
+ AI+ +L
Sbjct: 608 DLAINFDEL 616
>ref|XP_004247263.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Solanum
lycopersicum]
Length = 619
Score = 62.0 bits (149), Expect = 8e-08
Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 3/72 (4%)
Frame = +3
Query: 6 LSKMKSEGLKAAGYQCYKKVCRLGLWDANLSDSLENVMSDPADGISTFSEKDASEVS--- 176
L +M ++GL AAGY Y+KVC LGLW+A+L+ S+E + + I +FSE + E+S
Sbjct: 552 LKEMLADGLTAAGYDTYQKVCELGLWEADLASSMEKALGE----IESFSEAQSKELSGMC 607
Query: 177 WTSEYAIDLSDL 212
W ++ I+L DL
Sbjct: 608 WNNDEMINLDDL 619
>ref|XP_002527264.1| ribonuclease, putative [Ricinus communis]
gi|223533357|gb|EEF35108.1| ribonuclease, putative
[Ricinus communis]
Length = 624
Score = 62.0 bits (149), Expect = 8e-08
Identities = 29/69 (42%), Positives = 42/69 (60%)
Frame = +3
Query: 6 LSKMKSEGLKAAGYQCYKKVCRLGLWDANLSDSLENVMSDPADGISTFSEKDASEVSWTS 185
L +M SEG++AA Y Y +VCRLGLW NL+DSL+ ++D + S +S W
Sbjct: 556 LREMVSEGVRAASYDTYNRVCRLGLWHENLADSLDKALADTDHPSDSDSVTSSSNTYWCH 615
Query: 186 EYAIDLSDL 212
E+ I+L +L
Sbjct: 616 EWMINLDEL 624
>ref|NP_189170.1| poly(A)-specific ribonuclease PARN-like protein [Arabidopsis
thaliana] gi|75162449|sp|Q8W4C3.1|PARNL_ARATH RecName:
Full=Poly(A)-specific ribonuclease PARN-like; AltName:
Full=Polyadenylate-specific ribonuclease-like protein
gi|17065176|gb|AAL32742.1| Unknown protein [Arabidopsis
thaliana] gi|30725444|gb|AAP37744.1| At3g25430
[Arabidopsis thaliana] gi|332643489|gb|AEE77010.1|
poly(A)-specific ribonuclease PARN-like protein
[Arabidopsis thaliana]
Length = 618
Score = 61.2 bits (147), Expect = 1e-07
Identities = 27/69 (39%), Positives = 45/69 (65%)
Frame = +3
Query: 6 LSKMKSEGLKAAGYQCYKKVCRLGLWDANLSDSLENVMSDPADGISTFSEKDASEVSWTS 185
L +M +EGL+ AGY+ YK+ CRLG W+A+L++SL+ + + S+ SE+ W++
Sbjct: 552 LREMVAEGLRGAGYETYKRACRLGFWEADLAESLDKALE--SSDTDPDSDTKPSEIDWSN 609
Query: 186 EYAIDLSDL 212
E AI+ +L
Sbjct: 610 ELAINFDEL 618
>ref|XP_006345714.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Solanum
tuberosum]
Length = 619
Score = 60.8 bits (146), Expect = 2e-07
Identities = 28/69 (40%), Positives = 45/69 (65%)
Frame = +3
Query: 6 LSKMKSEGLKAAGYQCYKKVCRLGLWDANLSDSLENVMSDPADGISTFSEKDASEVSWTS 185
L +M ++GL AAGY+ Y+KVC LGLW+++L+ S+E S+ + S K+ S + W +
Sbjct: 552 LKEMLADGLTAAGYETYQKVCELGLWESDLASSMEKA-SEEIESFSEAQSKELSGLCWNN 610
Query: 186 EYAIDLSDL 212
+ I+L DL
Sbjct: 611 DEMINLDDL 619
>ref|XP_003532241.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Glycine max]
Length = 619
Score = 60.1 bits (144), Expect = 3e-07
Identities = 24/69 (34%), Positives = 43/69 (62%)
Frame = +3
Query: 6 LSKMKSEGLKAAGYQCYKKVCRLGLWDANLSDSLENVMSDPADGISTFSEKDASEVSWTS 185
L ++ S+G++ Y+ Y +CRLGLW+ +L++SLE + I + E+ +SE+ W +
Sbjct: 551 LKELVSDGMRVTSYETYNTICRLGLWEMDLAESLERALESSCCDIESNCERKSSEIHWYN 610
Query: 186 EYAIDLSDL 212
+ I+L DL
Sbjct: 611 DNVINLDDL 619
>gb|EOX93743.1| Poly(A)-specific ribonuclease PARN-like, putative isoform 3
[Theobroma cacao]
Length = 508
Score = 58.9 bits (141), Expect = 7e-07
Identities = 27/67 (40%), Positives = 44/67 (65%)
Frame = +3
Query: 6 LSKMKSEGLKAAGYQCYKKVCRLGLWDANLSDSLENVMSDPADGISTFSEKDASEVSWTS 185
L ++ SEGL+AAGY+ YK+ C LG W+A+L+ +L+ + P + SE + SEV W +
Sbjct: 438 LRELVSEGLRAAGYETYKRACGLGYWEADLASALDKASATPDCFSQSGSETNPSEVYWCN 497
Query: 186 EYAIDLS 206
+ I+L+
Sbjct: 498 DLMINLA 504