BLASTX nr result

ID: Zingiber23_contig00042113 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00042113
         (416 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522748.1| PREDICTED: putative DNA-binding protein ESCA...    56   6e-06
ref|XP_004299724.1| PREDICTED: putative DNA-binding protein ESCA...    55   7e-06
tpg|DAA55778.1| TPA: hypothetical protein ZEAMMB73_584155 [Zea m...    55   7e-06
ref|XP_002456947.1| hypothetical protein SORBIDRAFT_03g046120 [S...    55   7e-06
ref|XP_002514030.1| DNA binding protein, putative [Ricinus commu...    55   1e-05

>ref|XP_003522748.1| PREDICTED: putative DNA-binding protein ESCAROLA-like [Glycine max]
          Length = 280

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/74 (40%), Positives = 43/74 (58%)
 Frame = -2

Query: 223 VVITKASESAMQPVVLELAGGSDVVSGVSDFAHRRXXXXXXXXXXXXXXXVTLRLPSSAH 44
           V+IT+  E AM P +LE++GG+DVV  ++ F+HR+               VTLR PS+  
Sbjct: 86  VIITRDPEPAMSPYILEVSGGNDVVEAIAQFSHRKNMGICVLTGSGTVANVTLRQPSTTP 145

Query: 43  GGPSTIAVPGRFDI 2
           G  +T+   GRFDI
Sbjct: 146 G--TTVTFHGRFDI 157


>ref|XP_004299724.1| PREDICTED: putative DNA-binding protein ESCAROLA-like [Fragaria
           vesca subsp. vesca]
          Length = 314

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 33/74 (44%), Positives = 42/74 (56%)
 Frame = -2

Query: 223 VVITKASESAMQPVVLELAGGSDVVSGVSDFAHRRXXXXXXXXXXXXXXXVTLRLPSSAH 44
           V+IT+ SE AM P +LE+ GGSD+V  VS F+ R+               VTLR PSS  
Sbjct: 116 VIITRDSEPAMSPYILEVPGGSDIVDAVSRFSCRKNIGLVILTGSGTVANVTLRQPSSTP 175

Query: 43  GGPSTIAVPGRFDI 2
           G  +T+   GRFDI
Sbjct: 176 G--ATVTFHGRFDI 187


>tpg|DAA55778.1| TPA: hypothetical protein ZEAMMB73_584155 [Zea mays]
          Length = 294

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 40/114 (35%), Positives = 54/114 (47%)
 Frame = -2

Query: 343 GEGASRQRAIVLVEPAXXXXXXXXXXXXXXXXXXXXXXXPVVITKASESAMQPVVLELAG 164
           GE  +   A  LV+PA                       PVV+T+ SE+AM+PVVLELA 
Sbjct: 3   GEKTASSGATDLVDPATATATAQKKPRGRPLGSKNKPKPPVVVTRESEAAMRPVVLELAA 62

Query: 163 GSDVVSGVSDFAHRRXXXXXXXXXXXXXXXVTLRLPSSAHGGPSTIAVPGRFDI 2
           G DVV  V+ FA RR               VTLRL +S+    + + + GRF++
Sbjct: 63  GCDVVGAVAAFARRRRVGVSVLCGRGAVAAVTLRLAASS----AAVTLHGRFEV 112


>ref|XP_002456947.1| hypothetical protein SORBIDRAFT_03g046120 [Sorghum bicolor]
           gi|241928922|gb|EES02067.1| hypothetical protein
           SORBIDRAFT_03g046120 [Sorghum bicolor]
          Length = 250

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 33/74 (44%), Positives = 45/74 (60%)
 Frame = -2

Query: 223 VVITKASESAMQPVVLELAGGSDVVSGVSDFAHRRXXXXXXXXXXXXXXXVTLRLPSSAH 44
           VV+T+ S++AM+PVVLELA G DVVS V+ FA RR               VTLRL ++A 
Sbjct: 46  VVVTRESDAAMRPVVLELAAGCDVVSAVAAFARRRRVGVSVLCGRGAVAAVTLRL-AAAE 104

Query: 43  GGPSTIAVPGRFDI 2
              S + + GRF++
Sbjct: 105 DTASAVTLHGRFEV 118


>ref|XP_002514030.1| DNA binding protein, putative [Ricinus communis]
           gi|223547116|gb|EEF48613.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 310

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 33/74 (44%), Positives = 40/74 (54%)
 Frame = -2

Query: 223 VVITKASESAMQPVVLELAGGSDVVSGVSDFAHRRXXXXXXXXXXXXXXXVTLRLPSSAH 44
           V+IT+  E AM P +LE+ GGSDVV  +S F  R+               VTLR PS+  
Sbjct: 112 VIITRDPEPAMSPYILEVCGGSDVVEAISRFCRRKNIGICVLTGSGTVANVTLRQPSTTP 171

Query: 43  GGPSTIAVPGRFDI 2
           G  STI   GRFDI
Sbjct: 172 G--STITFHGRFDI 183


Top