BLASTX nr result
ID: Zingiber23_contig00041982
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00041982
(286 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003562297.1| PREDICTED: putative DNA repair and recombina... 140 2e-31
ref|XP_004982575.1| PREDICTED: putative DNA repair and recombina... 138 7e-31
gb|EMT30647.1| Putative DNA repair and recombination protein RAD... 137 2e-30
gb|EMS60403.1| Putative DNA repair and recombination protein RAD... 137 2e-30
ref|XP_006651546.1| PREDICTED: putative DNA repair and recombina... 135 4e-30
gb|EEE62986.1| hypothetical protein OsJ_17794 [Oryza sativa Japo... 135 6e-30
ref|NP_001055021.1| Os05g0247900 [Oryza sativa Japonica Group] g... 135 6e-30
ref|XP_002464356.1| hypothetical protein SORBIDRAFT_01g016830 [S... 135 7e-30
ref|XP_002274640.2| PREDICTED: LOW QUALITY PROTEIN: putative DNA... 134 9e-30
emb|CBI21870.3| unnamed protein product [Vitis vinifera] 134 9e-30
emb|CAN79218.1| hypothetical protein VITISV_012795 [Vitis vinifera] 134 9e-30
gb|EOX99453.1| Switch 2 [Theobroma cacao] 134 2e-29
gb|AFW68339.1| hypothetical protein ZEAMMB73_785836 [Zea mays] 133 3e-29
gb|AFW68338.1| hypothetical protein ZEAMMB73_785836 [Zea mays] 133 3e-29
ref|XP_006853540.1| hypothetical protein AMTR_s00032p00230880 [A... 129 3e-28
ref|XP_006306750.1| hypothetical protein CARUB_v10008286mg [Caps... 129 4e-28
gb|AAD10693.1| Hypothetical protein [Arabidopsis thaliana] 129 5e-28
ref|NP_171871.2| protein CHROMATIN REMODELING 9 [Arabidopsis tha... 129 5e-28
ref|XP_002889473.1| predicted protein [Arabidopsis lyrata subsp.... 128 9e-28
gb|EMJ00128.1| hypothetical protein PRUPE_ppa001197mg [Prunus pe... 127 2e-27
>ref|XP_003562297.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Brachypodium distachyon]
Length = 851
Score = 140 bits (353), Expect = 2e-31
Identities = 61/94 (64%), Positives = 78/94 (82%)
Frame = +2
Query: 2 NLYKSNHGGVLGDDMGLGKTIQVIAFLAAVTGKDNEHRADKVYHAVEKGPILIICPTSII 181
NLY++NHGGVLGDDMGLGKTIQ IAFL++V GKDN++ + GP+LIICPTS+I
Sbjct: 141 NLYRNNHGGVLGDDMGLGKTIQTIAFLSSVIGKDNDNGEKSTDKGKKTGPVLIICPTSVI 200
Query: 182 QNWENELSEWGDFSVSVYHGPNRELILEKLKTHG 283
+NWENE +EW FSV+VYHGPNR+L+LEK+++ G
Sbjct: 201 RNWENEFAEWASFSVAVYHGPNRDLVLEKIESQG 234
>ref|XP_004982575.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Setaria italica]
Length = 885
Score = 138 bits (348), Expect = 7e-31
Identities = 62/94 (65%), Positives = 77/94 (81%)
Frame = +2
Query: 2 NLYKSNHGGVLGDDMGLGKTIQVIAFLAAVTGKDNEHRADKVYHAVEKGPILIICPTSII 181
NLY++NHGGVLGDDMGLGKTIQ IAFL++V GK N H + GP+LI+CPTS+I
Sbjct: 154 NLYRNNHGGVLGDDMGLGKTIQTIAFLSSVIGKGNGHE-QSTDKGKKTGPVLILCPTSVI 212
Query: 182 QNWENELSEWGDFSVSVYHGPNRELILEKLKTHG 283
+NWENE SEW +FSV+VYHGPNREL+L+K++T G
Sbjct: 213 RNWENEFSEWAEFSVAVYHGPNRELVLQKIETQG 246
>gb|EMT30647.1| Putative DNA repair and recombination protein RAD26-like protein
[Aegilops tauschii]
Length = 943
Score = 137 bits (344), Expect = 2e-30
Identities = 60/94 (63%), Positives = 75/94 (79%)
Frame = +2
Query: 2 NLYKSNHGGVLGDDMGLGKTIQVIAFLAAVTGKDNEHRADKVYHAVEKGPILIICPTSII 181
NLY++NHGGVLGDDMGLGKTIQ IAFL++V GKDN + P+LI+CPTS+I
Sbjct: 220 NLYRNNHGGVLGDDMGLGKTIQTIAFLSSVIGKDNNQGEKSTDKGKKSSPVLILCPTSVI 279
Query: 182 QNWENELSEWGDFSVSVYHGPNRELILEKLKTHG 283
+NWENE SEW +FSV+VYHGPNR+L+LEK++ G
Sbjct: 280 RNWENEFSEWANFSVAVYHGPNRDLVLEKIEGQG 313
>gb|EMS60403.1| Putative DNA repair and recombination protein RAD26-like protein
[Triticum urartu]
Length = 859
Score = 137 bits (344), Expect = 2e-30
Identities = 60/94 (63%), Positives = 75/94 (79%)
Frame = +2
Query: 2 NLYKSNHGGVLGDDMGLGKTIQVIAFLAAVTGKDNEHRADKVYHAVEKGPILIICPTSII 181
NLY++NHGGVLGDDMGLGKTIQ IAFL++V GKDN + P+LI+CPTS+I
Sbjct: 136 NLYRNNHGGVLGDDMGLGKTIQTIAFLSSVIGKDNNQGEKSTDKGKKSSPVLILCPTSVI 195
Query: 182 QNWENELSEWGDFSVSVYHGPNRELILEKLKTHG 283
+NWENE SEW +FSV+VYHGPNR+L+LEK++ G
Sbjct: 196 RNWENEFSEWANFSVAVYHGPNRDLVLEKIEGQG 229
>ref|XP_006651546.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Oryza brachyantha]
Length = 1111
Score = 135 bits (341), Expect = 4e-30
Identities = 61/94 (64%), Positives = 80/94 (85%)
Frame = +2
Query: 2 NLYKSNHGGVLGDDMGLGKTIQVIAFLAAVTGKDNEHRADKVYHAVEKGPILIICPTSII 181
NLY++NHGGVLGDDMGLGKTIQ IAFL+AVTGKDN+ ++++ + GPILI+CPTS+I
Sbjct: 401 NLYRNNHGGVLGDDMGLGKTIQTIAFLSAVTGKDNDD-SEQLVEGRKIGPILILCPTSVI 459
Query: 182 QNWENELSEWGDFSVSVYHGPNRELILEKLKTHG 283
+NWENE +EW SV+VYHGPNR+L+L+K++ G
Sbjct: 460 RNWENEFAEWARCSVAVYHGPNRDLVLQKVEAQG 493
>gb|EEE62986.1| hypothetical protein OsJ_17794 [Oryza sativa Japonica Group]
Length = 947
Score = 135 bits (340), Expect = 6e-30
Identities = 61/92 (66%), Positives = 78/92 (84%)
Frame = +2
Query: 2 NLYKSNHGGVLGDDMGLGKTIQVIAFLAAVTGKDNEHRADKVYHAVEKGPILIICPTSII 181
NLY++NHGGVLGDDMGLGKTIQ IAFL+AV GKDN+H D++ + PILI+CPTS+I
Sbjct: 236 NLYRNNHGGVLGDDMGLGKTIQTIAFLSAVIGKDNDH-GDQLVEGRKIAPILILCPTSVI 294
Query: 182 QNWENELSEWGDFSVSVYHGPNRELILEKLKT 277
+NWENE +EW SV+VYHGPNR+L+L+K++T
Sbjct: 295 RNWENEFAEWARCSVAVYHGPNRDLVLQKVET 326
>ref|NP_001055021.1| Os05g0247900 [Oryza sativa Japonica Group]
gi|54291735|gb|AAV32104.1| uknown protein [Oryza sativa
Japonica Group] gi|113578572|dbj|BAF16935.1|
Os05g0247900 [Oryza sativa Japonica Group]
gi|125551533|gb|EAY97242.1| hypothetical protein
OsI_19162 [Oryza sativa Indica Group]
gi|215701224|dbj|BAG92648.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 856
Score = 135 bits (340), Expect = 6e-30
Identities = 61/92 (66%), Positives = 78/92 (84%)
Frame = +2
Query: 2 NLYKSNHGGVLGDDMGLGKTIQVIAFLAAVTGKDNEHRADKVYHAVEKGPILIICPTSII 181
NLY++NHGGVLGDDMGLGKTIQ IAFL+AV GKDN+H D++ + PILI+CPTS+I
Sbjct: 145 NLYRNNHGGVLGDDMGLGKTIQTIAFLSAVIGKDNDH-GDQLVEGRKIAPILILCPTSVI 203
Query: 182 QNWENELSEWGDFSVSVYHGPNRELILEKLKT 277
+NWENE +EW SV+VYHGPNR+L+L+K++T
Sbjct: 204 RNWENEFAEWARCSVAVYHGPNRDLVLQKVET 235
>ref|XP_002464356.1| hypothetical protein SORBIDRAFT_01g016830 [Sorghum bicolor]
gi|241918210|gb|EER91354.1| hypothetical protein
SORBIDRAFT_01g016830 [Sorghum bicolor]
Length = 888
Score = 135 bits (339), Expect = 7e-30
Identities = 60/94 (63%), Positives = 76/94 (80%)
Frame = +2
Query: 2 NLYKSNHGGVLGDDMGLGKTIQVIAFLAAVTGKDNEHRADKVYHAVEKGPILIICPTSII 181
NLY++NHGG+LGDDMGLGKTIQ IAFL++V GK N H + GP+LI+CPTS+I
Sbjct: 156 NLYRNNHGGILGDDMGLGKTIQTIAFLSSVIGKGNGHE-QSTNKGKKIGPVLILCPTSVI 214
Query: 182 QNWENELSEWGDFSVSVYHGPNRELILEKLKTHG 283
+NWENE SEW +FSV+VYHGPNR+L+L K++T G
Sbjct: 215 RNWENEFSEWAEFSVAVYHGPNRDLVLGKIETQG 248
>ref|XP_002274640.2| PREDICTED: LOW QUALITY PROTEIN: putative DNA repair and
recombination protein RAD26-like [Vitis vinifera]
Length = 851
Score = 134 bits (338), Expect = 9e-30
Identities = 64/97 (65%), Positives = 75/97 (77%), Gaps = 3/97 (3%)
Frame = +2
Query: 2 NLYKSNHGGVLGDDMGLGKTIQVIAFLAAVTGKDNEHRADKVYHAVE---KGPILIICPT 172
NLYK NHGGVLGDDMGLGKTIQ IAFLAA+ GKD E + + KGP+LI+CPT
Sbjct: 139 NLYKHNHGGVLGDDMGLGKTIQTIAFLAAMFGKDGECGDSTILKGNQMGKKGPVLIVCPT 198
Query: 173 SIIQNWENELSEWGDFSVSVYHGPNRELILEKLKTHG 283
S+I NWE+E S+W FSVSVYHG NR+LIL+KL+ HG
Sbjct: 199 SVIHNWESEFSKWATFSVSVYHGANRDLILDKLEAHG 235
>emb|CBI21870.3| unnamed protein product [Vitis vinifera]
Length = 874
Score = 134 bits (338), Expect = 9e-30
Identities = 64/97 (65%), Positives = 75/97 (77%), Gaps = 3/97 (3%)
Frame = +2
Query: 2 NLYKSNHGGVLGDDMGLGKTIQVIAFLAAVTGKDNEHRADKVYHAVE---KGPILIICPT 172
NLYK NHGGVLGDDMGLGKTIQ IAFLAA+ GKD E + + KGP+LI+CPT
Sbjct: 139 NLYKHNHGGVLGDDMGLGKTIQTIAFLAAMFGKDGECGDSTILKGNQMGKKGPVLIVCPT 198
Query: 173 SIIQNWENELSEWGDFSVSVYHGPNRELILEKLKTHG 283
S+I NWE+E S+W FSVSVYHG NR+LIL+KL+ HG
Sbjct: 199 SVIHNWESEFSKWATFSVSVYHGANRDLILDKLEAHG 235
>emb|CAN79218.1| hypothetical protein VITISV_012795 [Vitis vinifera]
Length = 874
Score = 134 bits (338), Expect = 9e-30
Identities = 64/97 (65%), Positives = 75/97 (77%), Gaps = 3/97 (3%)
Frame = +2
Query: 2 NLYKSNHGGVLGDDMGLGKTIQVIAFLAAVTGKDNEHRADKVYHAVE---KGPILIICPT 172
NLYK NHGGVLGDDMGLGKTIQ IAFLAA+ GKD E + + KGP+LI+CPT
Sbjct: 139 NLYKHNHGGVLGDDMGLGKTIQTIAFLAAMFGKDGECGDSTILKGNQMGKKGPVLIVCPT 198
Query: 173 SIIQNWENELSEWGDFSVSVYHGPNRELILEKLKTHG 283
S+I NWE+E S+W FSVSVYHG NR+LIL+KL+ HG
Sbjct: 199 SVIHNWESEFSKWATFSVSVYHGANRDLILDKLEAHG 235
>gb|EOX99453.1| Switch 2 [Theobroma cacao]
Length = 886
Score = 134 bits (336), Expect = 2e-29
Identities = 66/96 (68%), Positives = 75/96 (78%), Gaps = 3/96 (3%)
Frame = +2
Query: 5 LYKSNHGGVLGDDMGLGKTIQVIAFLAAVTGKDNEHRADKVY---HAVEKGPILIICPTS 175
LYK+NHGGVLGDDMGLGKTIQ IAFLAAV GKD E+ ++ +KGPILIICPTS
Sbjct: 159 LYKNNHGGVLGDDMGLGKTIQTIAFLAAVYGKDEEYGDSRILMENQVGKKGPILIICPTS 218
Query: 176 IIQNWENELSEWGDFSVSVYHGPNRELILEKLKTHG 283
+I NWE E S W FSVSVYHG +RELILEKL+ +G
Sbjct: 219 VIHNWECEFSRWATFSVSVYHGSSRELILEKLQANG 254
>gb|AFW68339.1| hypothetical protein ZEAMMB73_785836 [Zea mays]
Length = 630
Score = 133 bits (334), Expect = 3e-29
Identities = 60/94 (63%), Positives = 74/94 (78%)
Frame = +2
Query: 2 NLYKSNHGGVLGDDMGLGKTIQVIAFLAAVTGKDNEHRADKVYHAVEKGPILIICPTSII 181
NLY++NHGGVLGDDMGLGKTIQ IAFL++V GK N H GP+LI+CPTS+I
Sbjct: 153 NLYRNNHGGVLGDDMGLGKTIQTIAFLSSVIGKGNGH-GQSTNKGKMTGPVLILCPTSVI 211
Query: 182 QNWENELSEWGDFSVSVYHGPNRELILEKLKTHG 283
+NWENE SEW +FSV+VYHGPNR+L+L K++ G
Sbjct: 212 RNWENEFSEWAEFSVAVYHGPNRDLVLGKIENQG 245
>gb|AFW68338.1| hypothetical protein ZEAMMB73_785836 [Zea mays]
Length = 687
Score = 133 bits (334), Expect = 3e-29
Identities = 60/94 (63%), Positives = 74/94 (78%)
Frame = +2
Query: 2 NLYKSNHGGVLGDDMGLGKTIQVIAFLAAVTGKDNEHRADKVYHAVEKGPILIICPTSII 181
NLY++NHGGVLGDDMGLGKTIQ IAFL++V GK N H GP+LI+CPTS+I
Sbjct: 153 NLYRNNHGGVLGDDMGLGKTIQTIAFLSSVIGKGNGH-GQSTNKGKMTGPVLILCPTSVI 211
Query: 182 QNWENELSEWGDFSVSVYHGPNRELILEKLKTHG 283
+NWENE SEW +FSV+VYHGPNR+L+L K++ G
Sbjct: 212 RNWENEFSEWAEFSVAVYHGPNRDLVLGKIENQG 245
>ref|XP_006853540.1| hypothetical protein AMTR_s00032p00230880 [Amborella trichopoda]
gi|548857193|gb|ERN15007.1| hypothetical protein
AMTR_s00032p00230880 [Amborella trichopoda]
Length = 827
Score = 129 bits (325), Expect = 3e-28
Identities = 62/94 (65%), Positives = 72/94 (76%), Gaps = 3/94 (3%)
Frame = +2
Query: 5 LYKSNHGGVLGDDMGLGKTIQVIAFLAAVTGKDNEHRADKVYHA---VEKGPILIICPTS 175
LYK+NHGG+LGDDMGLGKTIQ IAFL AV G D EH +++ K LI+CPTS
Sbjct: 138 LYKNNHGGILGDDMGLGKTIQTIAFLVAVLGADAEHSENQMLTGDILKNKSLTLIVCPTS 197
Query: 176 IIQNWENELSEWGDFSVSVYHGPNRELILEKLKT 277
IIQNWENE SEWG F V+VYHG NR+LIL+K+KT
Sbjct: 198 IIQNWENEFSEWGSFDVAVYHGSNRDLILDKIKT 231
>ref|XP_006306750.1| hypothetical protein CARUB_v10008286mg [Capsella rubella]
gi|482575461|gb|EOA39648.1| hypothetical protein
CARUB_v10008286mg [Capsella rubella]
Length = 860
Score = 129 bits (324), Expect = 4e-28
Identities = 64/95 (67%), Positives = 72/95 (75%), Gaps = 1/95 (1%)
Frame = +2
Query: 2 NLYKSNHGGVLGDDMGLGKTIQVIAFLAAVTGKDNEHRADKVYHAVEKGPILIICPTSII 181
NLYK+NHGG+LGDDMGLGKTIQ IAFLA V GKD E V + EKGP+LIICP+SII
Sbjct: 153 NLYKNNHGGILGDDMGLGKTIQTIAFLAGVYGKDGEAGDTSVLES-EKGPVLIICPSSII 211
Query: 182 QNWENELSEWGD-FSVSVYHGPNRELILEKLKTHG 283
NWE+E S W F VSVYHG NR++ILEKL G
Sbjct: 212 HNWESEFSRWASFFKVSVYHGSNRDMILEKLNARG 246
>gb|AAD10693.1| Hypothetical protein [Arabidopsis thaliana]
Length = 874
Score = 129 bits (323), Expect = 5e-28
Identities = 63/95 (66%), Positives = 73/95 (76%), Gaps = 1/95 (1%)
Frame = +2
Query: 2 NLYKSNHGGVLGDDMGLGKTIQVIAFLAAVTGKDNEHRADKVYHAVEKGPILIICPTSII 181
NLYK+NHGG+LGDDMGLGKTIQ IAFLAAV GKD + + +KGP+LIICP+SII
Sbjct: 164 NLYKNNHGGILGDDMGLGKTIQTIAFLAAVYGKDGD-AGESCLLESDKGPVLIICPSSII 222
Query: 182 QNWENELSEWGD-FSVSVYHGPNRELILEKLKTHG 283
NWE+E S W F VSVYHG NR++ILEKLK G
Sbjct: 223 HNWESEFSRWASFFKVSVYHGSNRDMILEKLKARG 257
>ref|NP_171871.2| protein CHROMATIN REMODELING 9 [Arabidopsis thaliana]
gi|332189485|gb|AEE27606.1| switch 2 [Arabidopsis
thaliana]
Length = 862
Score = 129 bits (323), Expect = 5e-28
Identities = 63/95 (66%), Positives = 73/95 (76%), Gaps = 1/95 (1%)
Frame = +2
Query: 2 NLYKSNHGGVLGDDMGLGKTIQVIAFLAAVTGKDNEHRADKVYHAVEKGPILIICPTSII 181
NLYK+NHGG+LGDDMGLGKTIQ IAFLAAV GKD + + +KGP+LIICP+SII
Sbjct: 152 NLYKNNHGGILGDDMGLGKTIQTIAFLAAVYGKDGD-AGESCLLESDKGPVLIICPSSII 210
Query: 182 QNWENELSEWGD-FSVSVYHGPNRELILEKLKTHG 283
NWE+E S W F VSVYHG NR++ILEKLK G
Sbjct: 211 HNWESEFSRWASFFKVSVYHGSNRDMILEKLKARG 245
>ref|XP_002889473.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335315|gb|EFH65732.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 876
Score = 128 bits (321), Expect = 9e-28
Identities = 62/95 (65%), Positives = 73/95 (76%), Gaps = 1/95 (1%)
Frame = +2
Query: 2 NLYKSNHGGVLGDDMGLGKTIQVIAFLAAVTGKDNEHRADKVYHAVEKGPILIICPTSII 181
NLYK+NHGG+LGDDMGLGKTIQ IAFLA V GKD + + + +KGP+LIICP+SII
Sbjct: 153 NLYKNNHGGILGDDMGLGKTIQTIAFLAGVYGKDGDAGETSLLES-DKGPVLIICPSSII 211
Query: 182 QNWENELSEWGD-FSVSVYHGPNRELILEKLKTHG 283
NWE+E S W F VSVYHG NR++ILEKLK G
Sbjct: 212 HNWESEFSRWASFFKVSVYHGSNRDMILEKLKARG 246
>gb|EMJ00128.1| hypothetical protein PRUPE_ppa001197mg [Prunus persica]
Length = 884
Score = 127 bits (318), Expect = 2e-27
Identities = 57/96 (59%), Positives = 73/96 (76%), Gaps = 3/96 (3%)
Frame = +2
Query: 2 NLYKSNHGGVLGDDMGLGKTIQVIAFLAAVTGKDNEHRAD---KVYHAVEKGPILIICPT 172
NLYK+NHGG+LGDDMGLGKTIQ IAFLAAV G D + K E+GP+LI+CP+
Sbjct: 148 NLYKNNHGGILGDDMGLGKTIQTIAFLAAVFGNDGDCMDSTLLKKNQTAERGPVLIVCPS 207
Query: 173 SIIQNWENELSEWGDFSVSVYHGPNRELILEKLKTH 280
S+I NWE+E S+W +F V+VYHG NR+L+ +KL+ H
Sbjct: 208 SVIHNWESEFSKWANFGVAVYHGANRDLVYDKLEAH 243