BLASTX nr result
ID: Zingiber23_contig00041913
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00041913
(267 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003520781.2| PREDICTED: putative pentatricopeptide repeat... 89 6e-16
gb|ESW35278.1| hypothetical protein PHAVU_001G221600g [Phaseolus... 89 8e-16
ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containi... 87 3e-15
emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera] 87 3e-15
gb|EOY11777.1| Tetratricopeptide repeat superfamily protein [The... 84 3e-14
tpg|DAA54254.1| TPA: hypothetical protein ZEAMMB73_730789 [Zea m... 83 3e-14
gb|EXB57553.1| hypothetical protein L484_022659 [Morus notabilis] 82 6e-14
ref|XP_004971531.1| PREDICTED: pentatricopeptide repeat-containi... 81 1e-13
ref|XP_002457688.1| hypothetical protein SORBIDRAFT_03g011690 [S... 81 1e-13
ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumi... 80 3e-13
ref|XP_004163774.1| PREDICTED: putative pentatricopeptide repeat... 80 3e-13
ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group] g... 80 3e-13
gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays] 80 3e-13
gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japo... 80 3e-13
ref|XP_004961436.1| PREDICTED: pentatricopeptide repeat-containi... 79 5e-13
ref|XP_004961435.1| PREDICTED: pentatricopeptide repeat-containi... 79 5e-13
gb|EMT21127.1| hypothetical protein F775_09199 [Aegilops tauschii] 79 5e-13
ref|XP_006648309.1| PREDICTED: pentatricopeptide repeat-containi... 79 8e-13
ref|XP_004494504.1| PREDICTED: pentatricopeptide repeat-containi... 78 1e-12
ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat... 78 1e-12
>ref|XP_003520781.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1135
Score = 89.0 bits (219), Expect = 6e-16
Identities = 40/63 (63%), Positives = 52/63 (82%)
Frame = +3
Query: 3 CRKFRNLELGSKVAQKLFRIEPHNSGNYVLLSNMYASNGMLEEAKEIRRLMQSNGVRKET 182
C K N+E+G +VA++LF++EP N GNY+LLSN+Y +GMLEEA E+RRLM NGVRKE+
Sbjct: 579 CGKHANVEMGREVAERLFKLEPDNPGNYMLLSNIYIRHGMLEEADEVRRLMGINGVRKES 638
Query: 183 GCS 191
GCS
Sbjct: 639 GCS 641
Score = 82.0 bits (201), Expect = 7e-14
Identities = 37/63 (58%), Positives = 49/63 (77%)
Frame = +3
Query: 3 CRKFRNLELGSKVAQKLFRIEPHNSGNYVLLSNMYASNGMLEEAKEIRRLMQSNGVRKET 182
C K N+E+G + A++LF++EP N NY+LL N+Y +GMLEEA E+RRLM NGVRKE+
Sbjct: 1025 CGKHANVEMGREAAERLFKLEPDNPRNYMLLLNIYLRHGMLEEADEVRRLMGINGVRKES 1084
Query: 183 GCS 191
GCS
Sbjct: 1085 GCS 1087
>gb|ESW35278.1| hypothetical protein PHAVU_001G221600g [Phaseolus vulgaris]
Length = 701
Score = 88.6 bits (218), Expect = 8e-16
Identities = 40/63 (63%), Positives = 51/63 (80%)
Frame = +3
Query: 3 CRKFRNLELGSKVAQKLFRIEPHNSGNYVLLSNMYASNGMLEEAKEIRRLMQSNGVRKET 182
C K N+E+G +VA++LF +EP N GNYV+L+N+Y +GMLEEA E+RRLM NGVRKET
Sbjct: 509 CGKHGNVEMGREVAERLFELEPDNPGNYVVLANIYTRHGMLEEADEVRRLMGINGVRKET 568
Query: 183 GCS 191
GCS
Sbjct: 569 GCS 571
>ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 585
Score = 86.7 bits (213), Expect = 3e-15
Identities = 39/63 (61%), Positives = 50/63 (79%)
Frame = +3
Query: 3 CRKFRNLELGSKVAQKLFRIEPHNSGNYVLLSNMYASNGMLEEAKEIRRLMQSNGVRKET 182
CRK+ NL++G + A++LF +EP+N GNYVLL+NM +G LEEA E+RRLM NGVRKE
Sbjct: 392 CRKYGNLKMGREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEP 451
Query: 183 GCS 191
GCS
Sbjct: 452 GCS 454
>emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
Length = 820
Score = 86.7 bits (213), Expect = 3e-15
Identities = 39/63 (61%), Positives = 50/63 (79%)
Frame = +3
Query: 3 CRKFRNLELGSKVAQKLFRIEPHNSGNYVLLSNMYASNGMLEEAKEIRRLMQSNGVRKET 182
CRK+ NL++G + A++LF +EP+N GNYVLL+NM +G LEEA E+RRLM NGVRKE
Sbjct: 627 CRKYGNLKMGREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEP 686
Query: 183 GCS 191
GCS
Sbjct: 687 GCS 689
>gb|EOY11777.1| Tetratricopeptide repeat superfamily protein [Theobroma cacao]
Length = 708
Score = 83.6 bits (205), Expect = 3e-14
Identities = 40/63 (63%), Positives = 47/63 (74%)
Frame = +3
Query: 3 CRKFRNLELGSKVAQKLFRIEPHNSGNYVLLSNMYASNGMLEEAKEIRRLMQSNGVRKET 182
C + NLELG +VA +LF +EP+N GNYVLLSNMYA G L EA ++RRLM N VRKE
Sbjct: 516 CANYGNLELGIEVAGRLFELEPNNPGNYVLLSNMYAHKGKLREADQVRRLMGINRVRKEP 575
Query: 183 GCS 191
GCS
Sbjct: 576 GCS 578
>tpg|DAA54254.1| TPA: hypothetical protein ZEAMMB73_730789 [Zea mays]
Length = 868
Score = 83.2 bits (204), Expect = 3e-14
Identities = 39/64 (60%), Positives = 50/64 (78%)
Frame = +3
Query: 3 CRKFRNLELGSKVAQKLFRIEPHNSGNYVLLSNMYASNGMLEEAKEIRRLMQSNGVRKET 182
C R+LE+G +VA+KLF IEP N+GNYVLL+N+Y S+G LEEAKE+RR M +RKE
Sbjct: 802 CMNCRDLEMGKEVAKKLFVIEPGNTGNYVLLANIYTSHGRLEEAKEVRRWMMFQELRKEK 861
Query: 183 GCSI 194
GCS+
Sbjct: 862 GCSL 865
>gb|EXB57553.1| hypothetical protein L484_022659 [Morus notabilis]
Length = 613
Score = 82.4 bits (202), Expect = 6e-14
Identities = 38/63 (60%), Positives = 48/63 (76%)
Frame = +3
Query: 3 CRKFRNLELGSKVAQKLFRIEPHNSGNYVLLSNMYASNGMLEEAKEIRRLMQSNGVRKET 182
C+ NLE+G +VA+KLF +EP+N GNYV L NMY +NG L+EA ++RRLM N VRKE
Sbjct: 524 CKDHNNLEMGRQVAEKLFCLEPNNPGNYVQLCNMYTNNGRLKEADDVRRLMGLNRVRKEP 583
Query: 183 GCS 191
GCS
Sbjct: 584 GCS 586
>ref|XP_004971531.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Setaria italica]
Length = 572
Score = 81.3 bits (199), Expect = 1e-13
Identities = 40/64 (62%), Positives = 50/64 (78%)
Frame = +3
Query: 3 CRKFRNLELGSKVAQKLFRIEPHNSGNYVLLSNMYASNGMLEEAKEIRRLMQSNGVRKET 182
C R+LE+G +VA+KLF IEP NSGNYVLL+N+YAS+G LEEAKE+RR M +RKE
Sbjct: 499 CMNCRDLEIGEEVAKKLFVIEPGNSGNYVLLANIYASHGRLEEAKEVRRWMMFQELRKEK 558
Query: 183 GCSI 194
G S+
Sbjct: 559 GRSL 562
>ref|XP_002457688.1| hypothetical protein SORBIDRAFT_03g011690 [Sorghum bicolor]
gi|241929663|gb|EES02808.1| hypothetical protein
SORBIDRAFT_03g011690 [Sorghum bicolor]
Length = 564
Score = 81.3 bits (199), Expect = 1e-13
Identities = 39/64 (60%), Positives = 49/64 (76%)
Frame = +3
Query: 3 CRKFRNLELGSKVAQKLFRIEPHNSGNYVLLSNMYASNGMLEEAKEIRRLMQSNGVRKET 182
C R+LE+ +VA KLF IEP N+GNYVLL+N+YAS+G LEEAKE+RR M +RKE
Sbjct: 498 CINCRDLEMAKEVANKLFVIEPGNTGNYVLLANIYASHGRLEEAKEVRRWMMFQELRKEK 557
Query: 183 GCSI 194
GCS+
Sbjct: 558 GCSL 561
>ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
Length = 1866
Score = 80.1 bits (196), Expect(2) = 3e-13
Identities = 39/63 (61%), Positives = 45/63 (71%)
Frame = +3
Query: 3 CRKFRNLELGSKVAQKLFRIEPHNSGNYVLLSNMYASNGMLEEAKEIRRLMQSNGVRKET 182
CR NL +G +VA KLF +EP N GNYVLL N+ NGML EA E+RR M+S GVRKE
Sbjct: 512 CRNHSNLIMGKEVALKLFDLEPDNPGNYVLLCNILTRNGMLNEADEVRRKMESIGVRKEP 571
Query: 183 GCS 191
GCS
Sbjct: 572 GCS 574
Score = 20.4 bits (41), Expect(2) = 3e-13
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +2
Query: 185 MQHQTRCLFSHD*SHHATEQIY 250
+++ T HD SH T++IY
Sbjct: 578 IKNSTYVFTVHDKSHEKTKEIY 599
>ref|XP_004163774.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 556
Score = 80.1 bits (196), Expect(2) = 3e-13
Identities = 39/63 (61%), Positives = 45/63 (71%)
Frame = +3
Query: 3 CRKFRNLELGSKVAQKLFRIEPHNSGNYVLLSNMYASNGMLEEAKEIRRLMQSNGVRKET 182
CR NL +G +VA KLF +EP N GNYVLL N+ NGML EA E+RR M+S GVRKE
Sbjct: 364 CRNHSNLIMGKEVALKLFDLEPDNPGNYVLLCNILTRNGMLNEADEVRRKMESIGVRKEP 423
Query: 183 GCS 191
GCS
Sbjct: 424 GCS 426
Score = 20.4 bits (41), Expect(2) = 3e-13
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +2
Query: 185 MQHQTRCLFSHD*SHHATEQIY 250
+++ T HD SH T++IY
Sbjct: 430 IKNSTYVFTVHDKSHEKTKEIY 451
>ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide
(PPR) repeat-containing protein [Oryza sativa Japonica
Group] gi|218190072|gb|EEC72499.1| hypothetical protein
OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa
Japonica Group]
Length = 922
Score = 80.1 bits (196), Expect = 3e-13
Identities = 36/66 (54%), Positives = 49/66 (74%)
Frame = +3
Query: 3 CRKFRNLELGSKVAQKLFRIEPHNSGNYVLLSNMYASNGMLEEAKEIRRLMQSNGVRKET 182
C+ +N E+G + A+KLFRIEP N+GNYV+LSN+Y+S GM E E+R++M+ GV KE
Sbjct: 729 CKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEP 788
Query: 183 GCSIKQ 200
GCS Q
Sbjct: 789 GCSWTQ 794
>gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 80.1 bits (196), Expect = 3e-13
Identities = 34/66 (51%), Positives = 50/66 (75%)
Frame = +3
Query: 3 CRKFRNLELGSKVAQKLFRIEPHNSGNYVLLSNMYASNGMLEEAKEIRRLMQSNGVRKET 182
C+ +N+E+G + A+KLF IEP N+GNYV+LSN+Y+S GM +E ++R+LM+ GV K+
Sbjct: 728 CKIHKNVEIGRRAAEKLFSIEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLMKERGVNKDP 787
Query: 183 GCSIKQ 200
GCS Q
Sbjct: 788 GCSWMQ 793
>gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 80.1 bits (196), Expect = 3e-13
Identities = 36/66 (54%), Positives = 49/66 (74%)
Frame = +3
Query: 3 CRKFRNLELGSKVAQKLFRIEPHNSGNYVLLSNMYASNGMLEEAKEIRRLMQSNGVRKET 182
C+ +N E+G + A+KLFRIEP N+GNYV+LSN+Y+S GM E E+R++M+ GV KE
Sbjct: 729 CKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEP 788
Query: 183 GCSIKQ 200
GCS Q
Sbjct: 789 GCSWTQ 794
>ref|XP_004961436.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like isoform X2 [Setaria italica]
Length = 799
Score = 79.3 bits (194), Expect = 5e-13
Identities = 34/66 (51%), Positives = 49/66 (74%)
Frame = +3
Query: 3 CRKFRNLELGSKVAQKLFRIEPHNSGNYVLLSNMYASNGMLEEAKEIRRLMQSNGVRKET 182
C+ +N+ +G + A+KLF IEP N+GNYV+LSN+Y+S GM +E ++R+LM+ GV KE
Sbjct: 606 CKIHKNVHIGRRAAEKLFSIEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLMKEQGVNKEP 665
Query: 183 GCSIKQ 200
GCS Q
Sbjct: 666 GCSWMQ 671
>ref|XP_004961435.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like isoform X1 [Setaria italica]
Length = 843
Score = 79.3 bits (194), Expect = 5e-13
Identities = 34/66 (51%), Positives = 49/66 (74%)
Frame = +3
Query: 3 CRKFRNLELGSKVAQKLFRIEPHNSGNYVLLSNMYASNGMLEEAKEIRRLMQSNGVRKET 182
C+ +N+ +G + A+KLF IEP N+GNYV+LSN+Y+S GM +E ++R+LM+ GV KE
Sbjct: 650 CKIHKNVHIGRRAAEKLFSIEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLMKEQGVNKEP 709
Query: 183 GCSIKQ 200
GCS Q
Sbjct: 710 GCSWMQ 715
>gb|EMT21127.1| hypothetical protein F775_09199 [Aegilops tauschii]
Length = 923
Score = 79.3 bits (194), Expect = 5e-13
Identities = 36/66 (54%), Positives = 48/66 (72%)
Frame = +3
Query: 3 CRKFRNLELGSKVAQKLFRIEPHNSGNYVLLSNMYASNGMLEEAKEIRRLMQSNGVRKET 182
C+ +N E+G + A++LF IEP NSGNYV+LSN+Y+S GM E E+RR+M+ GV KE
Sbjct: 730 CKIHKNAEIGRRAAERLFAIEPSNSGNYVMLSNIYSSLGMWVEVAEVRRIMKQQGVTKEP 789
Query: 183 GCSIKQ 200
GCS Q
Sbjct: 790 GCSWMQ 795
>ref|XP_006648309.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Oryza brachyantha]
Length = 949
Score = 78.6 bits (192), Expect = 8e-13
Identities = 35/66 (53%), Positives = 48/66 (72%)
Frame = +3
Query: 3 CRKFRNLELGSKVAQKLFRIEPHNSGNYVLLSNMYASNGMLEEAKEIRRLMQSNGVRKET 182
C+ +N E+G + A+KLF IEP N+GNYV+LSN+Y+S GM E E+R++M+ GV KE
Sbjct: 756 CKIHKNAEIGKRAAEKLFTIEPSNAGNYVMLSNIYSSLGMWSEVAEVRKIMKQQGVIKEP 815
Query: 183 GCSIKQ 200
GCS Q
Sbjct: 816 GCSWTQ 821
>ref|XP_004494504.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cicer arietinum]
Length = 641
Score = 77.8 bits (190), Expect = 1e-12
Identities = 34/63 (53%), Positives = 50/63 (79%)
Frame = +3
Query: 3 CRKFRNLELGSKVAQKLFRIEPHNSGNYVLLSNMYASNGMLEEAKEIRRLMQSNGVRKET 182
C K+ ++E+G +VA++LF++EP N GNYVLLSN+Y + ML++A E++RLM N VRK+
Sbjct: 449 CGKYGHVEMGREVAERLFKLEPDNPGNYVLLSNIYTRHRMLDKADEVKRLMGINKVRKDI 508
Query: 183 GCS 191
GCS
Sbjct: 509 GCS 511
>ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 77.8 bits (190), Expect = 1e-12
Identities = 35/63 (55%), Positives = 46/63 (73%)
Frame = +3
Query: 3 CRKFRNLELGSKVAQKLFRIEPHNSGNYVLLSNMYASNGMLEEAKEIRRLMQSNGVRKET 182
CR RNLE+ A++LF +EP NSGNYVLLSN+YA GM EE K++R L++ G++K
Sbjct: 496 CRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQGMKKSP 555
Query: 183 GCS 191
GCS
Sbjct: 556 GCS 558