BLASTX nr result
ID: Zingiber23_contig00041912
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00041912
(411 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ESW35278.1| hypothetical protein PHAVU_001G221600g [Phaseolus... 84 7e-32
ref|XP_003520781.2| PREDICTED: putative pentatricopeptide repeat... 82 5e-30
emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera] 91 8e-28
ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containi... 91 8e-28
ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumi... 79 2e-27
ref|XP_004163774.1| PREDICTED: putative pentatricopeptide repeat... 79 2e-27
gb|EOY11777.1| Tetratricopeptide repeat superfamily protein [The... 83 4e-25
ref|XP_004494504.1| PREDICTED: pentatricopeptide repeat-containi... 85 5e-25
gb|EXB57553.1| hypothetical protein L484_022659 [Morus notabilis] 84 3e-20
ref|XP_004296063.1| PREDICTED: pentatricopeptide repeat-containi... 83 2e-19
gb|ADE76509.1| unknown [Picea sitchensis] 79 2e-17
gb|EXB63452.1| hypothetical protein L484_005415 [Morus notabilis] 73 3e-17
ref|XP_004971531.1| PREDICTED: pentatricopeptide repeat-containi... 77 1e-16
ref|XP_001761392.1| predicted protein [Physcomitrella patens] gi... 65 1e-16
ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containi... 70 1e-16
emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera] 70 2e-16
ref|XP_006343488.1| PREDICTED: pentatricopeptide repeat-containi... 77 2e-16
gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygr... 66 2e-16
ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containi... 69 2e-16
gb|EMJ28402.1| hypothetical protein PRUPE_ppa019251mg [Prunus pe... 70 3e-16
>gb|ESW35278.1| hypothetical protein PHAVU_001G221600g [Phaseolus vulgaris]
Length = 701
Score = 84.3 bits (207), Expect(3) = 7e-32
Identities = 39/69 (56%), Positives = 49/69 (71%)
Frame = +3
Query: 3 CMVDLLGRAGHLDEAMQFIDAMPIYPDSSVWGALLATCRKFRNLELGSKVVQNLFMIVLH 182
CMVDLLGR G L+EA +FI+ MPI PDSSVWGA L C K N+E+G +V + LF +
Sbjct: 472 CMVDLLGRVGRLEEAWRFIELMPIEPDSSVWGAFLGACGKHGNVEMGREVAERLFELEPD 531
Query: 183 NFGNYICIA 209
N GNY+ +A
Sbjct: 532 NPGNYVVLA 540
Score = 60.1 bits (144), Expect(3) = 7e-32
Identities = 26/48 (54%), Positives = 37/48 (77%)
Frame = +2
Query: 266 GLRKETR*SWIYVSNKTFIFTAHRQSHQATEQMYEMLGRLKELVKTKG 409
G+RKET SWI V N+TF+F + +SH T+++YEML +LKEL+K +G
Sbjct: 563 GVRKETGCSWIDVKNRTFVFNVNDRSHSRTQEIYEMLQKLKELIKKRG 610
Score = 38.9 bits (89), Expect(3) = 7e-32
Identities = 18/33 (54%), Positives = 21/33 (63%)
Frame = +1
Query: 181 ITLETTYASHGMLEEAKEVGRLMQSNGIRTKEG 279
+ L Y HGMLEEA EV RLM NG+R + G
Sbjct: 537 VVLANIYTRHGMLEEADEVRRLMGINGVRKETG 569
>ref|XP_003520781.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1135
Score = 81.6 bits (200), Expect(3) = 5e-30
Identities = 37/69 (53%), Positives = 49/69 (71%)
Frame = +3
Query: 3 CMVDLLGRAGHLDEAMQFIDAMPIYPDSSVWGALLATCRKFRNLELGSKVVQNLFMIVLH 182
CMVDLLGR G L+EA +FI++MP PDS VWGALL C K N+E+G +V + LF +
Sbjct: 542 CMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHANVEMGREVAERLFKLEPD 601
Query: 183 NFGNYICIA 209
N GNY+ ++
Sbjct: 602 NPGNYMLLS 610
Score = 57.4 bits (137), Expect(3) = 5e-30
Identities = 25/48 (52%), Positives = 37/48 (77%)
Frame = +2
Query: 266 GLRKETR*SWIYVSNKTFIFTAHRQSHQATEQMYEMLGRLKELVKTKG 409
G+RKE+ SWI V N+TF+F A+ +SH T+++Y ML +LKEL+K +G
Sbjct: 633 GVRKESGCSWIDVKNRTFVFNANDRSHSRTQEIYGMLQKLKELIKRRG 680
Score = 38.1 bits (87), Expect(3) = 5e-30
Identities = 18/31 (58%), Positives = 20/31 (64%)
Frame = +1
Query: 187 LETTYASHGMLEEAKEVGRLMQSNGIRTKEG 279
L Y HGMLEEA EV RLM NG+R + G
Sbjct: 609 LSNIYIRHGMLEEADEVRRLMGINGVRKESG 639
Score = 76.6 bits (187), Expect(3) = 1e-23
Identities = 35/68 (51%), Positives = 46/68 (67%)
Frame = +3
Query: 3 CMVDLLGRAGHLDEAMQFIDAMPIYPDSSVWGALLATCRKFRNLELGSKVVQNLFMIVLH 182
CMVDLLGR G L+EA +FI++MP PDS VWGALL C K N+E+G + + LF +
Sbjct: 988 CMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHANVEMGREAAERLFKLEPD 1047
Query: 183 NFGNYICI 206
N NY+ +
Sbjct: 1048 NPRNYMLL 1055
Score = 41.6 bits (96), Expect(3) = 1e-23
Identities = 19/40 (47%), Positives = 30/40 (75%)
Frame = +2
Query: 266 GLRKETR*SWIYVSNKTFIFTAHRQSHQATEQMYEMLGRL 385
G+RKE+ SWI V+N+TF+F A+ +S T+++Y ML +L
Sbjct: 1079 GVRKESGCSWIDVNNRTFVFFANDRSLSRTQEIYGMLQKL 1118
Score = 37.0 bits (84), Expect(3) = 1e-23
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +1
Query: 199 YASHGMLEEAKEVGRLMQSNGIRTKEG 279
Y HGMLEEA EV RLM NG+R + G
Sbjct: 1059 YLRHGMLEEADEVRRLMGINGVRKESG 1085
>emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
Length = 820
Score = 90.5 bits (223), Expect(2) = 8e-28
Identities = 44/84 (52%), Positives = 58/84 (69%)
Frame = +3
Query: 3 CMVDLLGRAGHLDEAMQFIDAMPIYPDSSVWGALLATCRKFRNLELGSKVVQNLFMIVLH 182
CMVDLLGRAG LDEA +FI++MP+ P SVWGALL CRK+ NL++G + + LF + +
Sbjct: 590 CMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPY 649
Query: 183 NFGNYICIAWNVRRS*RGRETNAI 254
N GNY+ +A RS R E N +
Sbjct: 650 NPGNYVLLANMCTRSGRLEEANEV 673
Score = 58.9 bits (141), Expect(2) = 8e-28
Identities = 26/48 (54%), Positives = 38/48 (79%)
Frame = +2
Query: 266 GLRKETR*SWIYVSNKTFIFTAHRQSHQATEQMYEMLGRLKELVKTKG 409
G+RKE SWI V N TF+FTAH +SH +++++Y+ML +L++LVK KG
Sbjct: 681 GVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDEIYKMLEKLEKLVKKKG 728
>ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 585
Score = 90.5 bits (223), Expect(2) = 8e-28
Identities = 44/84 (52%), Positives = 58/84 (69%)
Frame = +3
Query: 3 CMVDLLGRAGHLDEAMQFIDAMPIYPDSSVWGALLATCRKFRNLELGSKVVQNLFMIVLH 182
CMVDLLGRAG LDEA +FI++MP+ P SVWGALL CRK+ NL++G + + LF + +
Sbjct: 355 CMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPY 414
Query: 183 NFGNYICIAWNVRRS*RGRETNAI 254
N GNY+ +A RS R E N +
Sbjct: 415 NPGNYVLLANMCTRSGRLEEANEV 438
Score = 58.9 bits (141), Expect(2) = 8e-28
Identities = 26/48 (54%), Positives = 38/48 (79%)
Frame = +2
Query: 266 GLRKETR*SWIYVSNKTFIFTAHRQSHQATEQMYEMLGRLKELVKTKG 409
G+RKE SWI V N TF+FTAH +SH +++++Y+ML +L++LVK KG
Sbjct: 446 GVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDEIYKMLEKLEKLVKKKG 493
>ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
Length = 1866
Score = 78.6 bits (192), Expect(3) = 2e-27
Identities = 37/68 (54%), Positives = 47/68 (69%)
Frame = +3
Query: 3 CMVDLLGRAGHLDEAMQFIDAMPIYPDSSVWGALLATCRKFRNLELGSKVVQNLFMIVLH 182
C+VDLL RAG LD A +FI+ MPI PD+SVWGALL+ CR NL +G +V LF +
Sbjct: 475 CIVDLLSRAGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLFDLEPD 534
Query: 183 NFGNYICI 206
N GNY+ +
Sbjct: 535 NPGNYVLL 542
Score = 62.0 bits (149), Expect(3) = 2e-27
Identities = 27/48 (56%), Positives = 37/48 (77%)
Frame = +2
Query: 266 GLRKETR*SWIYVSNKTFIFTAHRQSHQATEQMYEMLGRLKELVKTKG 409
G+RKE SWI + N T++FT H +SH+ T+++YEML +LKELVK KG
Sbjct: 566 GVRKEPGCSWIDIKNSTYVFTVHDKSHEKTKEIYEMLEKLKELVKKKG 613
Score = 28.1 bits (61), Expect(3) = 2e-27
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 208 HGMLEEAKEVGRLMQSNGIRTKEG 279
+GML EA EV R M+S G+R + G
Sbjct: 549 NGMLNEADEVRRKMESIGVRKEPG 572
>ref|XP_004163774.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 556
Score = 78.6 bits (192), Expect(3) = 2e-27
Identities = 37/68 (54%), Positives = 47/68 (69%)
Frame = +3
Query: 3 CMVDLLGRAGHLDEAMQFIDAMPIYPDSSVWGALLATCRKFRNLELGSKVVQNLFMIVLH 182
C+VDLL RAG LD A +FI+ MPI PD+SVWGALL+ CR NL +G +V LF +
Sbjct: 327 CIVDLLSRAGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLFDLEPD 386
Query: 183 NFGNYICI 206
N GNY+ +
Sbjct: 387 NPGNYVLL 394
Score = 62.0 bits (149), Expect(3) = 2e-27
Identities = 27/48 (56%), Positives = 37/48 (77%)
Frame = +2
Query: 266 GLRKETR*SWIYVSNKTFIFTAHRQSHQATEQMYEMLGRLKELVKTKG 409
G+RKE SWI + N T++FT H +SH+ T+++YEML +LKELVK KG
Sbjct: 418 GVRKEPGCSWIDIKNSTYVFTVHDKSHEKTKEIYEMLEKLKELVKKKG 465
Score = 28.1 bits (61), Expect(3) = 2e-27
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 208 HGMLEEAKEVGRLMQSNGIRTKEG 279
+GML EA EV R M+S G+R + G
Sbjct: 401 NGMLNEADEVRRKMESIGVRKEPG 424
>gb|EOY11777.1| Tetratricopeptide repeat superfamily protein [Theobroma cacao]
Length = 708
Score = 82.8 bits (203), Expect(2) = 4e-25
Identities = 41/69 (59%), Positives = 49/69 (71%)
Frame = +3
Query: 3 CMVDLLGRAGHLDEAMQFIDAMPIYPDSSVWGALLATCRKFRNLELGSKVVQNLFMIVLH 182
CMVDLLGRAG LDEA +FI M I PDSSVWGALL C + NLELG +V LF + +
Sbjct: 479 CMVDLLGRAGQLDEAKKFIAQMRIKPDSSVWGALLGGCANYGNLELGIEVAGRLFELEPN 538
Query: 183 NFGNYICIA 209
N GNY+ ++
Sbjct: 539 NPGNYVLLS 547
Score = 57.8 bits (138), Expect(2) = 4e-25
Identities = 26/47 (55%), Positives = 35/47 (74%)
Frame = +2
Query: 269 LRKETR*SWIYVSNKTFIFTAHRQSHQATEQMYEMLGRLKELVKTKG 409
+RKE SWI V NKTF+FT H +SH +++YEML +++ELVK KG
Sbjct: 571 VRKEPGCSWIDVKNKTFVFTVHDKSHSRMDEIYEMLKKVEELVKDKG 617
>ref|XP_004494504.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cicer arietinum]
Length = 641
Score = 85.1 bits (209), Expect(2) = 5e-25
Identities = 38/69 (55%), Positives = 51/69 (73%)
Frame = +3
Query: 3 CMVDLLGRAGHLDEAMQFIDAMPIYPDSSVWGALLATCRKFRNLELGSKVVQNLFMIVLH 182
CMVDLLGR G L+EA FI++MPI PDSSVWGALL C K+ ++E+G +V + LF +
Sbjct: 412 CMVDLLGRVGRLEEAWNFIESMPIKPDSSVWGALLGACGKYGHVEMGREVAERLFKLEPD 471
Query: 183 NFGNYICIA 209
N GNY+ ++
Sbjct: 472 NPGNYVLLS 480
Score = 55.1 bits (131), Expect(2) = 5e-25
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = +2
Query: 269 LRKETR*SWIYVSNKTFIFTAHRQSHQATEQMYEMLGRLKELVKTKG 409
+RK+ SWI V NKTF+FT + +SH T +YEML LKEL+K +G
Sbjct: 504 VRKDIGCSWIDVKNKTFVFTVNDRSHSRTRDIYEMLQNLKELIKKRG 550
>gb|EXB57553.1| hypothetical protein L484_022659 [Morus notabilis]
Length = 613
Score = 83.6 bits (205), Expect(2) = 3e-20
Identities = 38/66 (57%), Positives = 49/66 (74%)
Frame = +3
Query: 3 CMVDLLGRAGHLDEAMQFIDAMPIYPDSSVWGALLATCRKFRNLELGSKVVQNLFMIVLH 182
CMVDLL RAG LDEA +FI++MPI P+SS WGALL C+ NLE+G +V + LF + +
Sbjct: 487 CMVDLLSRAGRLDEARRFIESMPIRPNSSSWGALLGACKDHNNLEMGRQVAEKLFCLEPN 546
Query: 183 NFGNYI 200
N GNY+
Sbjct: 547 NPGNYV 552
Score = 40.4 bits (93), Expect(2) = 3e-20
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +2
Query: 224 KLKRSGD*CNLMA*G-LRKETR*SWIYVSNKTFIFTAHRQSHQATEQM 364
+LK + D LM +RKE SWI + NKT +FTAH +SH T+++
Sbjct: 563 RLKEADDVRRLMGLNRVRKEPGCSWIDIKNKTIVFTAHDKSHSRTDEI 610
>ref|XP_004296063.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Fragaria vesca subsp. vesca]
Length = 867
Score = 82.8 bits (203), Expect(2) = 2e-19
Identities = 38/69 (55%), Positives = 46/69 (66%)
Frame = +3
Query: 3 CMVDLLGRAGHLDEAMQFIDAMPIYPDSSVWGALLATCRKFRNLELGSKVVQNLFMIVLH 182
CMVDLLGRAGHLD+A FI MP+ PD+SVWGALL CR N ELG + LF +
Sbjct: 637 CMVDLLGRAGHLDKAYSFIKTMPVQPDASVWGALLGACRIHGNAELGKVASEGLFAVDSE 696
Query: 183 NFGNYICIA 209
N G Y+ ++
Sbjct: 697 NVGYYVLLS 705
Score = 38.5 bits (88), Expect(2) = 2e-19
Identities = 21/48 (43%), Positives = 28/48 (58%)
Frame = +2
Query: 266 GLRKETR*SWIYVSNKTFIFTAHRQSHQATEQMYEMLGRLKELVKTKG 409
GLRK S I V+NK +F Q+H EQ+Y+ LG L E +K+ G
Sbjct: 728 GLRKTPGWSSIEVNNKVDVFYNGNQTHPLCEQIYQKLGELTEKMKSLG 775
>gb|ADE76509.1| unknown [Picea sitchensis]
Length = 246
Score = 79.0 bits (193), Expect(2) = 2e-17
Identities = 33/69 (47%), Positives = 46/69 (66%)
Frame = +3
Query: 3 CMVDLLGRAGHLDEAMQFIDAMPIYPDSSVWGALLATCRKFRNLELGSKVVQNLFMIVLH 182
CM+DLLGRAG LDEA F+ +P PD++VWGALL CR + N++LG + LF + H
Sbjct: 16 CMIDLLGRAGRLDEARDFMKTIPFAPDANVWGALLGACRMYGNIDLGKHAAECLFQLEPH 75
Query: 183 NFGNYICIA 209
N Y+ ++
Sbjct: 76 NAAKYVLLS 84
Score = 35.8 bits (81), Expect(2) = 2e-17
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +2
Query: 266 GLRKETR*SWIYVSNKTFIFTAHRQSHQATEQMYEMLGRLKELVKTKG 409
G++K+ SWI V NK F +SH TE++Y L L ++ G
Sbjct: 107 GVQKQPGCSWIEVKNKVHTFMVEDKSHPQTEEIYSTLEELARQMEAAG 154
>gb|EXB63452.1| hypothetical protein L484_005415 [Morus notabilis]
Length = 678
Score = 72.8 bits (177), Expect(3) = 3e-17
Identities = 33/69 (47%), Positives = 46/69 (66%)
Frame = +3
Query: 3 CMVDLLGRAGHLDEAMQFIDAMPIYPDSSVWGALLATCRKFRNLELGSKVVQNLFMIVLH 182
C+VDLLGRAG ++ A +FI MPI P +SVWGALL C+ +R ELG NLF +
Sbjct: 448 CVVDLLGRAGLVERAYEFIKKMPILPTTSVWGALLGACKMYRKSELGEIAADNLFKLDPK 507
Query: 183 NFGNYICIA 209
+ GN++ ++
Sbjct: 508 DSGNHVVLS 516
Score = 39.7 bits (91), Expect(3) = 3e-17
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +2
Query: 266 GLRKETR*SWIYVSNKTFIFTAHRQSHQATEQMYEMLGRLKELVKTKG 409
G++K SWI V N IF A SH+ ++ EML +L+ +VK G
Sbjct: 539 GIKKGAGYSWITVKNTVHIFQAKDTSHERNSEIQEMLTKLRRMVKEAG 586
Score = 21.2 bits (43), Expect(3) = 3e-17
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 181 ITLETTYASHGMLEEAKEVGRLMQSNGIRTKEG 279
+ L +A+ G EEA V + M+ GI+ G
Sbjct: 513 VVLSNMFAAAGRWEEATLVRKEMKDVGIKKGAG 545
>ref|XP_004971531.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Setaria italica]
Length = 572
Score = 76.6 bits (187), Expect(2) = 1e-16
Identities = 37/69 (53%), Positives = 48/69 (69%)
Frame = +3
Query: 3 CMVDLLGRAGHLDEAMQFIDAMPIYPDSSVWGALLATCRKFRNLELGSKVVQNLFMIVLH 182
CMVD+ GRAG L EA Q ID M + PD+SV GALL+ C R+LE+G +V + LF+I
Sbjct: 462 CMVDMFGRAGLLSEAKQLIDQMNVKPDASVLGALLSACMNCRDLEIGEEVAKKLFVIEPG 521
Query: 183 NFGNYICIA 209
N GNY+ +A
Sbjct: 522 NSGNYVLLA 530
Score = 35.4 bits (80), Expect(2) = 1e-16
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = +1
Query: 181 ITLETTYASHGMLEEAKEVGRLMQSNGIRTKEG 279
+ L YASHG LEEAKEV R M +R ++G
Sbjct: 527 VLLANIYASHGRLEEAKEVRRWMMFQELRKEKG 559
>ref|XP_001761392.1| predicted protein [Physcomitrella patens]
gi|162687398|gb|EDQ73781.1| predicted protein
[Physcomitrella patens]
Length = 833
Score = 64.7 bits (156), Expect(3) = 1e-16
Identities = 30/66 (45%), Positives = 41/66 (62%)
Frame = +3
Query: 3 CMVDLLGRAGHLDEAMQFIDAMPIYPDSSVWGALLATCRKFRNLELGSKVVQNLFMIVLH 182
CMVDLLGRAG LDEA I +MP+ P SS+W +LL CR NL++ + + MI +
Sbjct: 603 CMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNLDVAERAAERCLMIDPY 662
Query: 183 NFGNYI 200
+ Y+
Sbjct: 663 DGAVYV 668
Score = 36.6 bits (83), Expect(3) = 1e-16
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +2
Query: 266 GLRKETR*SWIYVSNKTFIFTAHRQSHQATEQMYEMLGRLKELVKTKG 409
G+RKE +WI V+ K F +SH ++Y L RL +K +G
Sbjct: 694 GIRKEQGCTWIEVAGKVHTFVVEDRSHPLVGEIYAELARLMNAIKREG 741
Score = 30.0 bits (66), Expect(3) = 1e-16
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 181 ITLETTYASHGMLEEAKEVGRLMQSNGIRTKEG 279
+ L YA+ GM E +V ++M+S GIR ++G
Sbjct: 668 VQLSHMYAAAGMWENVAKVRKVMESRGIRKEQG 700
>ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 70.1 bits (170), Expect(3) = 1e-16
Identities = 33/69 (47%), Positives = 44/69 (63%)
Frame = +3
Query: 3 CMVDLLGRAGHLDEAMQFIDAMPIYPDSSVWGALLATCRKFRNLELGSKVVQNLFMIVLH 182
CMV LL RAG L++A I MP+ PD+ VWGALL++CR N+ LG + LF +
Sbjct: 528 CMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPS 587
Query: 183 NFGNYICIA 209
N GNYI ++
Sbjct: 588 NPGNYILLS 596
Score = 33.5 bits (75), Expect(3) = 1e-16
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = +2
Query: 266 GLRKETR*SWIYVSNKTFIFTAHRQSHQATEQMYEMLGRLKELVKTKG 409
GLRK SWI V NK + A +SH Q+ E L +L +K G
Sbjct: 619 GLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIEKLDKLSMEMKKLG 666
Score = 27.7 bits (60), Expect(3) = 1e-16
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 181 ITLETTYASHGMLEEAKEVGRLMQSNGIRTKEG 279
I L YAS GM E V +M++ G+R G
Sbjct: 593 ILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPG 625
>emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 70.1 bits (170), Expect(3) = 2e-16
Identities = 33/69 (47%), Positives = 44/69 (63%)
Frame = +3
Query: 3 CMVDLLGRAGHLDEAMQFIDAMPIYPDSSVWGALLATCRKFRNLELGSKVVQNLFMIVLH 182
CMV LL RAG L++A I MP+ PD+ VWGALL++CR N+ LG + LF +
Sbjct: 528 CMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPS 587
Query: 183 NFGNYICIA 209
N GNYI ++
Sbjct: 588 NPGNYILLS 596
Score = 33.1 bits (74), Expect(3) = 2e-16
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = +2
Query: 266 GLRKETR*SWIYVSNKTFIFTAHRQSHQATEQMYEMLGRLKELVKTKG 409
GLRK SWI V NK + A +SH Q+ E L +L +K G
Sbjct: 619 GLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIENLDKLSMEMKKLG 666
Score = 27.7 bits (60), Expect(3) = 2e-16
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 181 ITLETTYASHGMLEEAKEVGRLMQSNGIRTKEG 279
I L YAS GM E V +M++ G+R G
Sbjct: 593 ILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPG 625
>ref|XP_006343488.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like isoform X1 [Solanum tuberosum]
gi|565353132|ref|XP_006343489.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g33990-like isoform X2 [Solanum tuberosum]
gi|565353134|ref|XP_006343490.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g33990-like isoform X3 [Solanum tuberosum]
gi|565353136|ref|XP_006343491.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g33990-like isoform X4 [Solanum tuberosum]
Length = 831
Score = 77.0 bits (188), Expect(2) = 2e-16
Identities = 37/69 (53%), Positives = 45/69 (65%)
Frame = +3
Query: 3 CMVDLLGRAGHLDEAMQFIDAMPIYPDSSVWGALLATCRKFRNLELGSKVVQNLFMIVLH 182
CMVDLL RAG L+ A QFI MP+ PD+SVWGALL CR N+ELG NLF +
Sbjct: 601 CMVDLLARAGGLETAYQFIKNMPLQPDASVWGALLGACRVHGNVELGKLASDNLFEVDPE 660
Query: 183 NFGNYICIA 209
N G Y+ ++
Sbjct: 661 NVGYYVVLS 669
Score = 33.9 bits (76), Expect(2) = 2e-16
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +2
Query: 266 GLRKETR*SWIYVSNKTFIFTAHRQSHQATEQMYEMLGRLKELVKTKG 409
GL+K S I ++NK +F QSH ++YE LG L +KT G
Sbjct: 692 GLKKTPGWSSIDLNNKIEVFYTGNQSHPQCHEIYEELGILTAKIKTLG 739
>gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 65.9 bits (159), Expect(3) = 2e-16
Identities = 29/56 (51%), Positives = 38/56 (67%)
Frame = +3
Query: 3 CMVDLLGRAGHLDEAMQFIDAMPIYPDSSVWGALLATCRKFRNLELGSKVVQNLFM 170
CMVDLLGRAG LDEA I+ MP+ P+SS+W LLA CR + NL++ + + M
Sbjct: 607 CMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAACRIYGNLDVAERAAERCLM 662
Score = 35.0 bits (79), Expect(3) = 2e-16
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +2
Query: 266 GLRKETR*SWIYVSNKTFIFTAHRQSHQATEQMYEMLGRLKELVKTKG 409
G+RKE +WI V K F +SH ++Y L RL +K +G
Sbjct: 698 GVRKEQGCTWIEVEGKLHTFVVEDRSHPQAGEIYAELARLMTAIKREG 745
Score = 29.6 bits (65), Expect(3) = 2e-16
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +1
Query: 181 ITLETTYASHGMLEEAKEVGRLMQSNGIRTKEG 279
+ L YA+ GM E +V ++M+S G+R ++G
Sbjct: 672 VQLSHMYAAAGMWENVAKVRKVMESRGVRKEQG 704
>ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like isoform X1 [Glycine max]
Length = 748
Score = 69.3 bits (168), Expect(3) = 2e-16
Identities = 33/69 (47%), Positives = 42/69 (60%)
Frame = +3
Query: 3 CMVDLLGRAGHLDEAMQFIDAMPIYPDSSVWGALLATCRKFRNLELGSKVVQNLFMIVLH 182
C+V LL R G L+EA I MP PD+ VWGALL++CR NL LG + LF +
Sbjct: 518 CLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSSCRVHNNLSLGEIAAEKLFFLEPT 577
Query: 183 NFGNYICIA 209
N GNYI ++
Sbjct: 578 NPGNYILLS 586
Score = 33.1 bits (74), Expect(3) = 2e-16
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +2
Query: 266 GLRKETR*SWIYVSNKTFIFTAHRQSHQATEQMYEMLGRLKELVKTKG 409
GLRK SWI V +K + A QSH + + E L +L +K G
Sbjct: 609 GLRKNPGYSWIEVGHKVHMLLAGDQSHPQMKDILEKLDKLNMQMKKSG 656
Score = 28.1 bits (61), Expect(3) = 2e-16
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 181 ITLETTYASHGMLEEAKEVGRLMQSNGIRTKEG 279
I L YAS G+ +E + +M+S G+R G
Sbjct: 583 ILLSNIYASKGLWDEENRIREVMKSKGLRKNPG 615
>gb|EMJ28402.1| hypothetical protein PRUPE_ppa019251mg [Prunus persica]
Length = 654
Score = 70.1 bits (170), Expect(3) = 3e-16
Identities = 34/69 (49%), Positives = 44/69 (63%)
Frame = +3
Query: 3 CMVDLLGRAGHLDEAMQFIDAMPIYPDSSVWGALLATCRKFRNLELGSKVVQNLFMIVLH 182
CMV LL R+G L+EA I MP PD+ VWGALL++CR N+ LG V + LF +
Sbjct: 424 CMVTLLSRSGKLEEAYSMIKQMPFEPDACVWGALLSSCRVHSNVTLGKYVAKKLFNLEPK 483
Query: 183 NFGNYICIA 209
N GNYI ++
Sbjct: 484 NPGNYILLS 492
Score = 33.9 bits (76), Expect(3) = 3e-16
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +2
Query: 266 GLRKETR*SWIYVSNKTFIFTAHRQSHQATEQMYEMLGRLKELVKTKG 409
GLRK SWI V NK + A ++H Q+ E L +L +K G
Sbjct: 515 GLRKNPGCSWIEVKNKVHMLLAGDKAHPQMNQIIEKLNKLSSEMKKLG 562
Score = 26.2 bits (56), Expect(3) = 3e-16
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 181 ITLETTYASHGMLEEAKEVGRLMQSNGIRTKEG 279
I L YAS GM E +V M+S G+R G
Sbjct: 489 ILLSNIYASKGMWSEVDKVRDKMKSLGLRKNPG 521