BLASTX nr result

ID: Zingiber23_contig00041744 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00041744
         (249 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006655248.1| PREDICTED: pentatricopeptide repeat-containi...   120   1e-25
gb|EXB68664.1| hypothetical protein L484_024678 [Morus notabilis]     120   2e-25
ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containi...   119   3e-25
emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]   119   3e-25
ref|XP_004292932.1| PREDICTED: pentatricopeptide repeat-containi...   119   5e-25
ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group] g...   119   5e-25
gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]        118   9e-25
ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containi...   117   2e-24
ref|XP_002301973.2| pentatricopeptide repeat-containing family p...   116   4e-24
gb|EOY15113.1| Pentatricopeptide repeat (PPR) superfamily protei...   116   4e-24
gb|ESW24601.1| hypothetical protein PHAVU_004G144300g [Phaseolus...   115   6e-24
ref|XP_004963823.1| PREDICTED: pentatricopeptide repeat-containi...   115   6e-24
gb|EMS48015.1| hypothetical protein TRIUR3_15376 [Triticum urartu]    115   6e-24
ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containi...   114   1e-23
gb|EMJ28402.1| hypothetical protein PRUPE_ppa019251mg [Prunus pe...   110   1e-22
ref|XP_006306841.1| hypothetical protein CARUB_v10008385mg [Caps...   110   3e-22
gb|AAF79892.1|AC022472_1 Contains similarity to an unknown prote...   108   6e-22
ref|NP_173449.1| pentatricopeptide repeat-containing protein [Ar...   108   6e-22
ref|XP_006416418.1| hypothetical protein EUTSA_v10009574mg [Eutr...   108   1e-21
gb|EMT13280.1| hypothetical protein F775_05245 [Aegilops tauschii]    108   1e-21

>ref|XP_006655248.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Oryza brachyantha]
          Length = 584

 Score =  120 bits (302), Expect = 1e-25
 Identities = 56/82 (68%), Positives = 69/82 (84%)
 Frame = +3

Query: 3   GRAGRLDEAHELIRKMRNEADSCVWGALLSACRVHGNVALAEVATKRLFELEPTNAGNYV 182
           GRAG+LD+A+++I +M  E DSC+WG+LL +CRVHGNV LAE+A + LF+LEP NAGNYV
Sbjct: 360 GRAGKLDDAYDVINQMPFEPDSCIWGSLLGSCRVHGNVVLAEIAAENLFQLEPENAGNYV 419

Query: 183 LLSNIYASKGMLDEVERVREMM 248
           LLSNIYASK M D V RVR+MM
Sbjct: 420 LLSNIYASKKMWDGVNRVRDMM 441


>gb|EXB68664.1| hypothetical protein L484_024678 [Morus notabilis]
          Length = 728

 Score =  120 bits (300), Expect = 2e-25
 Identities = 55/82 (67%), Positives = 69/82 (84%)
 Frame = +3

Query: 3   GRAGRLDEAHELIRKMRNEADSCVWGALLSACRVHGNVALAEVATKRLFELEPTNAGNYV 182
           GR+G+L+EA+ LI KM  E D+CVWG+LLS+CRVH NV+L EVA ++LFELEP N GNYV
Sbjct: 504 GRSGKLEEAYSLINKMPMEPDACVWGSLLSSCRVHNNVSLGEVAAEKLFELEPRNPGNYV 563

Query: 183 LLSNIYASKGMLDEVERVREMM 248
           +LSNIY SKGM  +V+RVR+MM
Sbjct: 564 ILSNIYGSKGMWSQVDRVRDMM 585


>ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
          Length = 758

 Score =  119 bits (299), Expect = 3e-25
 Identities = 55/81 (67%), Positives = 70/81 (86%)
 Frame = +3

Query: 6   RAGRLDEAHELIRKMRNEADSCVWGALLSACRVHGNVALAEVATKRLFELEPTNAGNYVL 185
           RAG+L++A+ +IR+M    D+CVWGALLS+CRVH NV+L EVA ++LFELEP+N GNY+L
Sbjct: 535 RAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYIL 594

Query: 186 LSNIYASKGMLDEVERVREMM 248
           LSNIYASKGM +EV RVR+MM
Sbjct: 595 LSNIYASKGMWNEVNRVRDMM 615


>emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
          Length = 760

 Score =  119 bits (299), Expect = 3e-25
 Identities = 55/81 (67%), Positives = 70/81 (86%)
 Frame = +3

Query: 6   RAGRLDEAHELIRKMRNEADSCVWGALLSACRVHGNVALAEVATKRLFELEPTNAGNYVL 185
           RAG+L++A+ +IR+M    D+CVWGALLS+CRVH NV+L EVA ++LFELEP+N GNY+L
Sbjct: 535 RAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYIL 594

Query: 186 LSNIYASKGMLDEVERVREMM 248
           LSNIYASKGM +EV RVR+MM
Sbjct: 595 LSNIYASKGMWNEVNRVRDMM 615


>ref|XP_004292932.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Fragaria vesca subsp. vesca]
          Length = 755

 Score =  119 bits (297), Expect = 5e-25
 Identities = 56/82 (68%), Positives = 66/82 (80%)
 Frame = +3

Query: 3   GRAGRLDEAHELIRKMRNEADSCVWGALLSACRVHGNVALAEVATKRLFELEPTNAGNYV 182
           GRAG+LDEA+ +I+KM  E D+CVWGALLS+CRVH NV L E   K+LF LEP N GNY+
Sbjct: 531 GRAGKLDEAYSMIKKMPFEPDACVWGALLSSCRVHNNVTLGESTAKKLFNLEPGNPGNYI 590

Query: 183 LLSNIYASKGMLDEVERVREMM 248
           LLSNIYASKGM  EV+RVR+ M
Sbjct: 591 LLSNIYASKGMWTEVDRVRDTM 612


>ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
           gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa
           Japonica Group] gi|113578900|dbj|BAF17263.1|
           Os05g0370000 [Oryza sativa Japonica Group]
          Length = 664

 Score =  119 bits (297), Expect = 5e-25
 Identities = 55/82 (67%), Positives = 68/82 (82%)
 Frame = +3

Query: 3   GRAGRLDEAHELIRKMRNEADSCVWGALLSACRVHGNVALAEVATKRLFELEPTNAGNYV 182
           GRAG+LD+A+++I +M  E D C+WG+LL +CRVHGNV LAEVA + LF+LEP NAGNYV
Sbjct: 440 GRAGKLDDAYDIINQMPFEPDGCIWGSLLGSCRVHGNVVLAEVAAENLFQLEPENAGNYV 499

Query: 183 LLSNIYASKGMLDEVERVREMM 248
           LLSNIYASK M D V R+R+MM
Sbjct: 500 LLSNIYASKKMWDGVNRLRDMM 521


>gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
          Length = 665

 Score =  118 bits (295), Expect = 9e-25
 Identities = 58/82 (70%), Positives = 67/82 (81%)
 Frame = +3

Query: 3   GRAGRLDEAHELIRKMRNEADSCVWGALLSACRVHGNVALAEVATKRLFELEPTNAGNYV 182
           GRAG+LDEA++LI  M  E D+ +WG+LL +CRVHGNV LAEVA ++LF LEP NAGNYV
Sbjct: 441 GRAGKLDEAYDLISDMPFEPDAYIWGSLLGSCRVHGNVDLAEVAAEKLFHLEPENAGNYV 500

Query: 183 LLSNIYASKGMLDEVERVREMM 248
           LLSNIYASK M D V RVREMM
Sbjct: 501 LLSNIYASKKMWDRVNRVREMM 522


>ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Brachypodium distachyon]
          Length = 661

 Score =  117 bits (293), Expect = 2e-24
 Identities = 56/82 (68%), Positives = 69/82 (84%)
 Frame = +3

Query: 3   GRAGRLDEAHELIRKMRNEADSCVWGALLSACRVHGNVALAEVATKRLFELEPTNAGNYV 182
           GR+G+LDEA++LI +M  E DSC+WG+LL +CRV+GNV LAEVA ++LF+LEP NAGNYV
Sbjct: 437 GRSGKLDEAYDLINEMPFEPDSCIWGSLLGSCRVYGNVLLAEVAAEKLFQLEPGNAGNYV 496

Query: 183 LLSNIYASKGMLDEVERVREMM 248
           LLSNIYASK M D V RVR+ M
Sbjct: 497 LLSNIYASKKMWDGVNRVRDEM 518


>ref|XP_002301973.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550344115|gb|EEE81246.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 724

 Score =  116 bits (290), Expect = 4e-24
 Identities = 55/82 (67%), Positives = 67/82 (81%)
 Frame = +3

Query: 3   GRAGRLDEAHELIRKMRNEADSCVWGALLSACRVHGNVALAEVATKRLFELEPTNAGNYV 182
           GR+GRL+EA+ +I++M  E DSCVWGALLS+CRVH  V L E+A KR+FELEP N GNY+
Sbjct: 500 GRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRVHNRVDLGEIAAKRVFELEPRNPGNYI 559

Query: 183 LLSNIYASKGMLDEVERVREMM 248
           LLSNIYASK M  EV+ VR+MM
Sbjct: 560 LLSNIYASKAMWVEVDMVRDMM 581


>gb|EOY15113.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
           cacao]
          Length = 758

 Score =  116 bits (290), Expect = 4e-24
 Identities = 51/82 (62%), Positives = 71/82 (86%)
 Frame = +3

Query: 3   GRAGRLDEAHELIRKMRNEADSCVWGALLSACRVHGNVALAEVATKRLFELEPTNAGNYV 182
           GR+G+L++A+ LI++M  E D+CVWGALLS+CR+H N++L E+A + LF+LEP+N GNY+
Sbjct: 534 GRSGKLEQAYALIQQMPFEPDACVWGALLSSCRLHNNISLGEIAAQNLFKLEPSNPGNYI 593

Query: 183 LLSNIYASKGMLDEVERVREMM 248
           LLSNIYASKGM DEV+ VR++M
Sbjct: 594 LLSNIYASKGMWDEVDAVRDVM 615


>gb|ESW24601.1| hypothetical protein PHAVU_004G144300g [Phaseolus vulgaris]
          Length = 601

 Score =  115 bits (288), Expect = 6e-24
 Identities = 52/81 (64%), Positives = 67/81 (82%)
 Frame = +3

Query: 6   RAGRLDEAHELIRKMRNEADSCVWGALLSACRVHGNVALAEVATKRLFELEPTNAGNYVL 185
           R G+L+EA+ +I++M  E D+CVWGALLS+CRVH N++L E+A ++LF LEP N GNYVL
Sbjct: 378 RVGKLEEAYSIIKEMPFEPDACVWGALLSSCRVHNNLSLGEIAAEKLFPLEPANPGNYVL 437

Query: 186 LSNIYASKGMLDEVERVREMM 248
           LSNIYASKG+ DE  R+REMM
Sbjct: 438 LSNIYASKGLWDEENRIREMM 458


>ref|XP_004963823.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Setaria italica]
          Length = 669

 Score =  115 bits (288), Expect = 6e-24
 Identities = 56/82 (68%), Positives = 66/82 (80%)
 Frame = +3

Query: 3   GRAGRLDEAHELIRKMRNEADSCVWGALLSACRVHGNVALAEVATKRLFELEPTNAGNYV 182
           GRAG+LDEA+++I  M  E D C+WG+LL +CRVHG+V LAEVA ++LF LEP NAGNYV
Sbjct: 445 GRAGKLDEAYDVITDMPFEPDGCIWGSLLGSCRVHGSVDLAEVAAEKLFHLEPDNAGNYV 504

Query: 183 LLSNIYASKGMLDEVERVREMM 248
           LLSNIYASK M   V RVREMM
Sbjct: 505 LLSNIYASKKMWGGVNRVREMM 526


>gb|EMS48015.1| hypothetical protein TRIUR3_15376 [Triticum urartu]
          Length = 662

 Score =  115 bits (288), Expect = 6e-24
 Identities = 55/82 (67%), Positives = 67/82 (81%)
 Frame = +3

Query: 3   GRAGRLDEAHELIRKMRNEADSCVWGALLSACRVHGNVALAEVATKRLFELEPTNAGNYV 182
           GRAG+LDEA++LI +M  E + C+WG+LL +CRV+GNV LAEVA ++LFELEP N GNYV
Sbjct: 438 GRAGKLDEAYDLINEMPFEPNGCIWGSLLGSCRVYGNVFLAEVAAEKLFELEPENTGNYV 497

Query: 183 LLSNIYASKGMLDEVERVREMM 248
           LLSNIYASK M D V RVR+ M
Sbjct: 498 LLSNIYASKKMWDGVSRVRDQM 519


>ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like isoform X1 [Glycine max]
          Length = 748

 Score =  114 bits (286), Expect = 1e-23
 Identities = 51/81 (62%), Positives = 68/81 (83%)
 Frame = +3

Query: 6   RAGRLDEAHELIRKMRNEADSCVWGALLSACRVHGNVALAEVATKRLFELEPTNAGNYVL 185
           R G+L+EA+ +I++M  E D+CVWGALLS+CRVH N++L E+A ++LF LEPTN GNY+L
Sbjct: 525 RVGKLEEAYSIIKEMPFEPDACVWGALLSSCRVHNNLSLGEIAAEKLFFLEPTNPGNYIL 584

Query: 186 LSNIYASKGMLDEVERVREMM 248
           LSNIYASKG+ DE  R+RE+M
Sbjct: 585 LSNIYASKGLWDEENRIREVM 605


>gb|EMJ28402.1| hypothetical protein PRUPE_ppa019251mg [Prunus persica]
          Length = 654

 Score =  110 bits (276), Expect = 1e-22
 Identities = 50/81 (61%), Positives = 65/81 (80%)
 Frame = +3

Query: 6   RAGRLDEAHELIRKMRNEADSCVWGALLSACRVHGNVALAEVATKRLFELEPTNAGNYVL 185
           R+G+L+EA+ +I++M  E D+CVWGALLS+CRVH NV L +   K+LF LEP N GNY+L
Sbjct: 431 RSGKLEEAYSMIKQMPFEPDACVWGALLSSCRVHSNVTLGKYVAKKLFNLEPKNPGNYIL 490

Query: 186 LSNIYASKGMLDEVERVREMM 248
           LSNIYASKGM  EV++VR+ M
Sbjct: 491 LSNIYASKGMWSEVDKVRDKM 511


>ref|XP_006306841.1| hypothetical protein CARUB_v10008385mg [Capsella rubella]
           gi|482575552|gb|EOA39739.1| hypothetical protein
           CARUB_v10008385mg [Capsella rubella]
          Length = 760

 Score =  110 bits (274), Expect = 3e-22
 Identities = 52/82 (63%), Positives = 65/82 (79%)
 Frame = +3

Query: 3   GRAGRLDEAHELIRKMRNEADSCVWGALLSACRVHGNVALAEVATKRLFELEPTNAGNYV 182
           GRAG+L EA+ELI++M  E DSCVWGALL++CR+  NV LAE+A  +LF+LEP N G YV
Sbjct: 536 GRAGKLQEAYELIKEMPFEPDSCVWGALLNSCRLQSNVDLAEIAADKLFDLEPENPGTYV 595

Query: 183 LLSNIYASKGMLDEVERVREMM 248
           LLSNIYA+KGM  EV+ +R  M
Sbjct: 596 LLSNIYAAKGMWTEVDSIRNKM 617


>gb|AAF79892.1|AC022472_1 Contains similarity to an unknown protein F28A21.160 gi|7486269
           from Arabidopsis thaliana BAC F28A21 gi|T04867 and
           contains multiple PPR PF|01535 repeats. EST gb|AI999742
           comes from this gene. This gene may be cut off, partial
           [Arabidopsis thaliana]
          Length = 757

 Score =  108 bits (271), Expect = 6e-22
 Identities = 51/82 (62%), Positives = 65/82 (79%)
 Frame = +3

Query: 3   GRAGRLDEAHELIRKMRNEADSCVWGALLSACRVHGNVALAEVATKRLFELEPTNAGNYV 182
           GRAG+L EA++LI++M  E DSCVWGALL++CR+  NV LAE+A ++LF LEP N G YV
Sbjct: 536 GRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYV 595

Query: 183 LLSNIYASKGMLDEVERVREMM 248
           LLSNIYA+KGM  EV+ +R  M
Sbjct: 596 LLSNIYAAKGMWTEVDSIRNKM 617


>ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g20230 gi|332191832|gb|AEE29953.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 760

 Score =  108 bits (271), Expect = 6e-22
 Identities = 51/82 (62%), Positives = 65/82 (79%)
 Frame = +3

Query: 3   GRAGRLDEAHELIRKMRNEADSCVWGALLSACRVHGNVALAEVATKRLFELEPTNAGNYV 182
           GRAG+L EA++LI++M  E DSCVWGALL++CR+  NV LAE+A ++LF LEP N G YV
Sbjct: 536 GRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYV 595

Query: 183 LLSNIYASKGMLDEVERVREMM 248
           LLSNIYA+KGM  EV+ +R  M
Sbjct: 596 LLSNIYAAKGMWTEVDSIRNKM 617


>ref|XP_006416418.1| hypothetical protein EUTSA_v10009574mg [Eutrema salsugineum]
           gi|557094189|gb|ESQ34771.1| hypothetical protein
           EUTSA_v10009574mg [Eutrema salsugineum]
          Length = 760

 Score =  108 bits (269), Expect = 1e-21
 Identities = 51/82 (62%), Positives = 66/82 (80%)
 Frame = +3

Query: 3   GRAGRLDEAHELIRKMRNEADSCVWGALLSACRVHGNVALAEVATKRLFELEPTNAGNYV 182
           GRAG+L EA++LI+++  E DSCVWGALL++CR+  NV LAE+A ++LF+LEP N G YV
Sbjct: 536 GRAGKLQEAYDLIKEIPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFDLEPENPGTYV 595

Query: 183 LLSNIYASKGMLDEVERVREMM 248
           LLSNIYA+KGM  EV+ VR  M
Sbjct: 596 LLSNIYAAKGMWAEVDSVRNKM 617


>gb|EMT13280.1| hypothetical protein F775_05245 [Aegilops tauschii]
          Length = 641

 Score =  108 bits (269), Expect = 1e-21
 Identities = 52/82 (63%), Positives = 67/82 (81%)
 Frame = +3

Query: 3   GRAGRLDEAHELIRKMRNEADSCVWGALLSACRVHGNVALAEVATKRLFELEPTNAGNYV 182
           GRAG LDEA+ LI++M+ + D+ +WGALLSACRVH NV LAE++ KRLFEL+ TN+G YV
Sbjct: 257 GRAGCLDEAYGLIKEMKVKPDAAIWGALLSACRVHKNVELAEISAKRLFELDATNSGYYV 316

Query: 183 LLSNIYASKGMLDEVERVREMM 248
           LLSNIYA  GM  +VER+R ++
Sbjct: 317 LLSNIYAEAGMWKDVERMRVLV 338