BLASTX nr result

ID: Zingiber23_contig00041728 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00041728
         (408 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOX94158.1| Uncharacterized protein TCM_003521 [Theobroma cacao]    43   3e-06
ref|XP_004148556.1| PREDICTED: uncharacterized protein LOC101218...    43   3e-06
gb|EOY19680.1| Integrase, putative [Theobroma cacao]                   43   4e-06
gb|EOY31699.1| Uncharacterized protein TCM_038764 [Theobroma cacao]    45   6e-06

>gb|EOX94158.1| Uncharacterized protein TCM_003521 [Theobroma cacao]
          Length = 1092

 Score = 43.1 bits (100), Expect(2) = 3e-06
 Identities = 22/54 (40%), Positives = 31/54 (57%)
 Frame = -2

Query: 266 QPKNLLIWTKALNTLQCRLTKEELNRVDLFENAKELLDKLIKQHEGTSDTKDQR 105
           + K + I  KA+NTL C LT  E N+V     AK++ +KL   HEGTS   + +
Sbjct: 76  ETKKVQINFKAINTLHCALTPTEFNKVSSCTTAKQVWEKLRIIHEGTSQVNESK 129



 Score = 33.5 bits (75), Expect(2) = 3e-06
 Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = -1

Query: 408 EGFSTAHPPLFTRDDFPY*KRRIEVYLK-MDIDKW 307
           EG ST  PPLF   ++PY   R+ +Y++ +D + W
Sbjct: 10  EGQSTNRPPLFDGSNYPYWSTRMSIYIRAIDYEMW 44


>ref|XP_004148556.1| PREDICTED: uncharacterized protein LOC101218085 [Cucumis sativus]
          Length = 388

 Score = 43.1 bits (100), Expect(2) = 3e-06
 Identities = 18/45 (40%), Positives = 30/45 (66%)
 Frame = -2

Query: 239 KALNTLQCRLTKEELNRVDLFENAKELLDKLIKQHEGTSDTKDQR 105
           KA+N L C L+K+E NR+ +  +A+E+ + L   HEGT+  K+ +
Sbjct: 84  KAINCLYCALSKDEFNRISMCSSAQEIWNTLEITHEGTNQVKESK 128



 Score = 33.5 bits (75), Expect(2) = 3e-06
 Identities = 15/41 (36%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = -1

Query: 408 EGFSTAHPPLFTRDDFPY*KRRIEVYLK-MDIDKWFSI*RG 289
           EG ST+ PP F   ++ Y K R+++YL+ +D + W  + +G
Sbjct: 11  EGQSTSRPPYFDGSNYAYWKARMKIYLQSIDYNLWLIVAKG 51


>gb|EOY19680.1| Integrase, putative [Theobroma cacao]
          Length = 163

 Score = 42.7 bits (99), Expect(2) = 4e-06
 Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
 Frame = -2

Query: 284 RHRLTK-QPKNLLIWTKALNTLQCRLTKEELNRVDLFENAKELLDKLIKQHEGTSDTKDQ 108
           R + TK + K + I  KA+NTL C LT  E N+V      K++ +KL   HEGTS   + 
Sbjct: 69  RSKWTKAETKKIQINFKAINTLHCALTPTEFNKVSSCTTVKQVWEKLRIIHEGTSQVNES 128

Query: 107 R 105
           +
Sbjct: 129 K 129



 Score = 33.5 bits (75), Expect(2) = 4e-06
 Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = -1

Query: 408 EGFSTAHPPLFTRDDFPY*KRRIEVYLK-MDIDKW 307
           EG ST  PPLF   ++PY   R+ +Y++ +D + W
Sbjct: 10  EGQSTNRPPLFDGSNYPYWSTRMSIYIRAIDYEMW 44


>gb|EOY31699.1| Uncharacterized protein TCM_038764 [Theobroma cacao]
          Length = 434

 Score = 45.1 bits (105), Expect(2) = 6e-06
 Identities = 23/54 (42%), Positives = 32/54 (59%)
 Frame = -2

Query: 266 QPKNLLIWTKALNTLQCRLTKEELNRVDLFENAKELLDKLIKQHEGTSDTKDQR 105
           + K + I  KA+NTL C LT  E N+V     AK++ +KL   HEGTS  K+ +
Sbjct: 76  ETKKVQINFKAINTLHCALTPTEFNKVSSCTTAKQVWEKLRIIHEGTSQVKESK 129



 Score = 30.4 bits (67), Expect(2) = 6e-06
 Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -1

Query: 408 EGFSTAHPPLFTRDDFPY*KRRIEVYLK-MDIDKW 307
           +G ST  PPLF   ++PY    + +Y+K +D + W
Sbjct: 10  KGQSTNRPPLFDGSNYPYWSTGMSIYIKAIDYEMW 44


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