BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00041713
         (570 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003558946.1| PREDICTED: endoribonuclease Dicer homolog 1-...    73   6e-11
ref|XP_004985932.1| PREDICTED: endoribonuclease Dicer homolog 1-...    69   6e-10
gb|AGQ04285.1| dicer-like 1, partial [Oryza meridionalis]              68   1e-09
gb|AGQ04286.1| dicer-like 1, partial [Oryza glaberrima]                67   3e-09
gb|AGQ04283.1| dicer-like 1, partial [Oryza longistaminata]            67   3e-09
gb|AGQ04280.1| dicer-like 1, partial [Oryza nivara] gi|522191435...    67   3e-09
gb|EAZ25399.1| hypothetical protein OsJ_09217 [Oryza sativa Japo...    67   3e-09
gb|EAY88320.1| hypothetical protein OsI_09779 [Oryza sativa Indi...    67   3e-09
sp|Q8LMR2.1|DCL1_ORYSJ RecName: Full=Endoribonuclease Dicer homo...    67   3e-09
ref|XP_006650986.1| PREDICTED: endoribonuclease Dicer homolog 1-...    65   9e-09

>ref|XP_003558946.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Brachypodium
           distachyon]
          Length = 1888

 Score = 72.8 bits (177), Expect = 6e-11
 Identities = 48/128 (37%), Positives = 67/128 (52%), Gaps = 14/128 (10%)
 Frame = -1

Query: 501 SYWFDVCEDDGSGLCGIDFS---DFDPSALPSLDHTDEEGLLGEIDRILDSINGDQ--XX 337
           +YW+D CED  S LCGIDF+   DFDP  +P++D   ++G + EIDRIL+SIN +     
Sbjct: 17  AYWYDACEDGASLLCGIDFAASADFDPGLMPAMDSGVDDGFVAEIDRILESINAESTPAP 76

Query: 336 XXXXXXXXPVEPASNVPV-----AAELVVQQCLSVENSCGG-DGAKDRREVVK---LEDK 184
                    V+P+   PV     AA  V    + V  S     GA+ R+E+ K       
Sbjct: 77  PPPQQQQALVDPSPQPPVEQGQEAAVAVADNAVEVVGSGQRIQGAETRKEMKKESHSSST 136

Query: 183 DGSAWNGG 160
           +GS+ NGG
Sbjct: 137 NGSSANGG 144


>ref|XP_004985932.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Setaria italica]
          Length = 1933

 Score = 69.3 bits (168), Expect = 6e-10
 Identities = 49/157 (31%), Positives = 72/157 (45%), Gaps = 24/157 (15%)
 Frame = -1

Query: 540 GDAATLVSGGD--PVSYWFDVCEDDGSGLCGIDFS---DFDPSALPSLDHTDEEGLLGEI 376
           GDA     GG+    SYW+D CED  S LCGIDF+   DFDP  +P++D   ++G + EI
Sbjct: 8   GDAG----GGEHAAASYWYDACEDGASLLCGIDFAASADFDPGLIPAMDCGADDGFVAEI 63

Query: 375 DRILDSINGDQXXXXXXXXXXPVEPASNVPVA-----------AELVVQQCLSVENSCGG 229
           DRIL+SIN +           P    +  PVA           A+ V    ++V ++   
Sbjct: 64  DRILESINAESAPTLAPPPPPPAPAPAPAPVAPPQLQPQLQEVAKAVAHNAVAVVDAAQR 123

Query: 228 DGAKDRREVVKLEDK--------DGSAWNGGRKYNST 142
           + A + R+  + E           G  W  G++   T
Sbjct: 124 NHAVEARKEPRRESPVAVANGRGGGGEWRDGKRQRLT 160


>gb|AGQ04285.1| dicer-like 1, partial [Oryza meridionalis]
          Length = 201

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 37/84 (44%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
 Frame = -1

Query: 501 SYWFDVCEDDGSGLCGIDFS---DFDPSALPSLDHTDEEGLLGEIDRILDSINGDQXXXX 331
           +YW+D CED  S LCGIDF+   DFDP  +P++D   ++G + EIDRIL+SIN +     
Sbjct: 16  AYWYDACEDGASLLCGIDFAASADFDPGLIPAMDTGADDGFVAEIDRILESINAESAPAP 75

Query: 330 XXXXXXPVEPASNVPVA-AELVVQ 262
                 P      VPVA  EL +Q
Sbjct: 76  PPPPPPPTPLPEPVPVAPPELPIQ 99


>gb|AGQ04286.1| dicer-like 1, partial [Oryza glaberrima]
          Length = 200

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 3/55 (5%)
 Frame = -1

Query: 501 SYWFDVCEDDGSGLCGIDFS---DFDPSALPSLDHTDEEGLLGEIDRILDSINGD 346
           +YW+D CED  S LCGIDF+   DFDP  +P++D   ++G + EIDRIL+SIN +
Sbjct: 17  AYWYDACEDGASLLCGIDFAASADFDPGLIPAMDTGADDGFVAEIDRILESINAE 71


>gb|AGQ04283.1| dicer-like 1, partial [Oryza longistaminata]
          Length = 201

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 3/55 (5%)
 Frame = -1

Query: 501 SYWFDVCEDDGSGLCGIDFS---DFDPSALPSLDHTDEEGLLGEIDRILDSINGD 346
           +YW+D CED  S LCGIDF+   DFDP  +P++D   ++G + EIDRIL+SIN +
Sbjct: 18  AYWYDACEDGASLLCGIDFAASADFDPGLIPAMDTGADDGFVAEIDRILESINAE 72


>gb|AGQ04280.1| dicer-like 1, partial [Oryza nivara] gi|522191435|gb|AGQ04281.1|
           dicer-like 1, partial [Oryza rufipogon]
           gi|522191437|gb|AGQ04282.1| dicer-like 1, partial [Oryza
           glumipatula] gi|522191441|gb|AGQ04284.1| dicer-like 1,
           partial [Oryza barthii] gi|522191447|gb|AGQ04287.1|
           dicer-like 1, partial [Oryza sativa Indica Group]
           gi|522191449|gb|AGQ04288.1| dicer-like 1, partial [Oryza
           sativa Japonica Group]
          Length = 201

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 3/55 (5%)
 Frame = -1

Query: 501 SYWFDVCEDDGSGLCGIDFS---DFDPSALPSLDHTDEEGLLGEIDRILDSINGD 346
           +YW+D CED  S LCGIDF+   DFDP  +P++D   ++G + EIDRIL+SIN +
Sbjct: 18  AYWYDACEDGASLLCGIDFAASADFDPGLIPAMDTGADDGFVAEIDRILESINAE 72


>gb|EAZ25399.1| hypothetical protein OsJ_09217 [Oryza sativa Japonica Group]
          Length = 1883

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 3/55 (5%)
 Frame = -1

Query: 501 SYWFDVCEDDGSGLCGIDFS---DFDPSALPSLDHTDEEGLLGEIDRILDSINGD 346
           +YW+D CED  S LCGIDF+   DFDP  +P++D   ++G + EIDRIL+SIN +
Sbjct: 18  AYWYDACEDGASLLCGIDFAASADFDPGLIPAMDTGADDGFVAEIDRILESINAE 72


>gb|EAY88320.1| hypothetical protein OsI_09779 [Oryza sativa Indica Group]
          Length = 1883

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 3/55 (5%)
 Frame = -1

Query: 501 SYWFDVCEDDGSGLCGIDFS---DFDPSALPSLDHTDEEGLLGEIDRILDSINGD 346
           +YW+D CED  S LCGIDF+   DFDP  +P++D   ++G + EIDRIL+SIN +
Sbjct: 18  AYWYDACEDGASLLCGIDFAASADFDPGLIPAMDTGADDGFVAEIDRILESINAE 72


>sp|Q8LMR2.1|DCL1_ORYSJ RecName: Full=Endoribonuclease Dicer homolog 1; AltName:
           Full=Dicer-like protein 1; Short=OsDCL1
           gi|21426125|gb|AAM52322.1|AC105363_11 Putative CAF
           protein [Oryza sativa Japonica Group]
           gi|108705906|gb|ABF93701.1| DEAD/DEAH box helicase
           carpel factory, putative, expressed [Oryza sativa
           Japonica Group]
          Length = 1883

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 3/55 (5%)
 Frame = -1

Query: 501 SYWFDVCEDDGSGLCGIDFS---DFDPSALPSLDHTDEEGLLGEIDRILDSINGD 346
           +YW+D CED  S LCGIDF+   DFDP  +P++D   ++G + EIDRIL+SIN +
Sbjct: 18  AYWYDACEDGASLLCGIDFAASADFDPGLIPAMDTGADDGFVAEIDRILESINAE 72


>ref|XP_006650986.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Oryza
           brachyantha]
          Length = 1855

 Score = 65.5 bits (158), Expect = 9e-09
 Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
 Frame = -1

Query: 501 SYWFDVCEDDGSGLCGIDFS---DFDPSALPSLDHTDEEGLLGEIDRILDSINGDQXXXX 331
           +YW+D CE+  S LCGIDF+   DFDP  +P++D   ++G + EIDRIL+SIN +     
Sbjct: 14  AYWYDACEEGVSLLCGIDFAASADFDPGLIPAMDTGADDGFVAEIDRILESINAESSPAP 73

Query: 330 XXXXXXPVEPAS 295
                   EP S
Sbjct: 74  PPPPPPLPEPVS 85